Initializing AMReX (26.04-100-g9aaff4128aa5)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.04-100-g9aaff4128aa5) initialized Starting run at 05:29:20 UTC on 2026-04-23. Successfully read inputs file ... Castro git describe: 26.04-6-g9e0439ba0 AMReX git describe: 26.04-100-g9aaff4128 Microphysics git describe: 26.04-3-ge03e94b4 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.01493079 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.330912244 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.322728531 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.332307818 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.32438182 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.372548964 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.284015173 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.279091313 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.276125303 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.276605178 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.276430202 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007552356 seconds Ending run at 05:29:23 UTC on 2026-04-23. Run time = 3.250964439 Run time without initialization = 3.085518679 Average number of zones advanced per microsecond: 0.850 Average number of zones advanced per microsecond per rank: 0.106 TinyProfiler total time across processes [min...avg...max]: 3.2505 ... 3.2508 ... 3.2511 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 1.9829 2.0652 2.1419 65.88% Gravity::make_radial_gravity() 21 0.2783 0.2857 0.296 9.10% check_for_negative_density() 10 0.04015 0.1266 0.2154 6.63% Castro::initData() 1 0.03513 0.06857 0.1014 3.12% Castro::estTimeStep() 21 0.0267 0.06349 0.1009 3.10% amrex::Copy() 193 0.07603 0.08489 0.09534 2.93% FabArray::ParallelCopy_finish() 41 0.06508 0.07104 0.07836 2.41% FabArray::setVal() 143 0.06713 0.06897 0.07309 2.25% Castro::reset_internal_energy(Fab) 1008 0.04443 0.04607 0.04735 1.46% FillPatchIterator::Initialize 41 0.04239 0.0446 0.04628 1.42% FabArray::ParallelCopy_nowait() 41 0.0317 0.03799 0.04053 1.25% Castro::normalize_species() 62 0.03348 0.03458 0.03688 1.13% StateData::FillBoundary(geom) 41 0.02921 0.03366 0.03582 1.10% Castro::initialize_do_advance() 10 0.01724 0.02118 0.03453 1.06% Gravity::interpolate_monopole_grav() 21 0.02528 0.02559 0.02599 0.80% Castro::construct_new_gravity_source() 10 0.02242 0.02343 0.02488 0.77% Castro::construct_old_gravity_source() 10 0.008488 0.01178 0.02327 0.72% Castro::computeTemp() 63 0.01841 0.01878 0.01963 0.60% FabArray::Saxpy() 20 0.01167 0.01369 0.01603 0.49% Castro::initialize_advance() 10 0.007887 0.009261 0.01374 0.42% FabArray::setDomainBndry() 41 0.008281 0.01129 0.01235 0.38% VisMF::Write(FabArray) 2 0.009249 0.009764 0.0123 0.38% MultiFab::contains_nan() 20 0.009631 0.01053 0.01138 0.35% Amr::writePlotFile() 2 0.007242 0.0101 0.01068 0.33% Castro::finalize_do_advance() 10 0.00134 0.002429 0.009118 0.28% Amr::coarseTimeStep() 10 0.001544 0.007548 0.008751 0.27% Castro::initMFs() 1 0.006541 0.006874 0.007231 0.22% Castro::construct_new_source() 50 0.006126 0.006349 0.006549 0.20% Gravity::get_new_grav_vector() 11 0.003734 0.00389 0.004209 0.13% Gravity::get_old_grav_vector() 10 0.001822 0.002403 0.002951 0.09% main() 1 0.001946 0.002026 0.00218 0.07% AmrLevel::FillPatch() 41 0.001288 0.001391 0.001534 0.05% Amr::timeStep() 10 0.0001441 0.0001818 0.0003359 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002465 0.0002596 0.0002777 0.01% Castro::Castro() 1 8.024e-05 0.0001163 0.0002028 0.01% Castro::do_advance_ctu() 10 0.0001653 0.0001779 0.0001943 0.01% Castro::clean_state() 62 0.0001338 0.0001515 0.000168 0.01% Castro::construct_old_source() 50 7.256e-05 9.006e-05 0.0001473 0.00% StateDataPhysBCFunct::() 41 9.727e-05 0.0001209 0.0001469 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001059 0.0001098 0.0001172 0.00% FabArray::ParallelCopy() 41 8.581e-05 9.983e-05 0.0001162 0.00% Castro::do_old_sources() 10 9.207e-05 0.0001028 0.0001124 0.00% Amr::FinalizeInit() 1 3.892e-06 1.611e-05 9.38e-05 0.00% Castro::apply_source_to_state() 20 5.383e-05 5.94e-05 7.726e-05 0.00% FillPatchSingleLevel 41 6.917e-05 7.301e-05 7.629e-05 0.00% Castro::advance() 10 3.959e-05 4.724e-05 6.614e-05 0.00% Castro::do_new_sources() 10 5.577e-05 6.096e-05 6.579e-05 0.00% Castro::construct_old_gravity() 10 3.533e-05 4.425e-05 6.404e-05 0.00% Castro::subcycle_advance_ctu() 10 4.804e-05 5.317e-05 6.082e-05 0.00% Castro::construct_new_gravity() 10 2.934e-05 3.641e-05 4.692e-05 0.00% Amr::defBaseLevel() 1 3.157e-05 3.545e-05 4.441e-05 0.00% Castro::check_for_nan() 20 2.445e-05 2.696e-05 3.08e-05 0.00% Castro::expand_state() 10 2.098e-05 2.488e-05 2.823e-05 0.00% Castro::post_timestep() 10 1.461e-05 1.649e-05 1.828e-05 0.00% Castro::computeNewDt() 9 9.402e-06 1.017e-05 1.115e-05 0.00% Amr::InitializeInit() 1 2.294e-06 3.594e-06 8.821e-06 0.00% Castro::computeInitialDt() 2 5.131e-06 6.693e-06 7.649e-06 0.00% Castro::post_init() 1 2.975e-06 3.774e-06 5.247e-06 0.00% Amr::init() 1 2e-06 2.589e-06 3.513e-06 0.00% Amr::initialInit() 1 1.421e-06 1.743e-06 2.174e-06 0.00% Other 265 0.01714 0.01917 0.02084 0.64% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.25 3.251 3.251 100.00% Amr::coarseTimeStep() 10 3.076 3.076 3.076 94.61% Amr::timeStep() 10 3.056 3.057 3.063 94.22% Castro::advance() 10 3.042 3.043 3.049 93.77% Castro::subcycle_advance_ctu() 10 2.972 2.974 2.981 91.70% Castro::do_advance_ctu() 10 2.971 2.973 2.981 91.70% Castro::construct_ctu_hydro_source() 10 2.201 2.211 2.218 68.21% Gravity::make_radial_gravity() 21 0.2964 0.3037 0.3128 9.62% AmrLevel::FillPatch() 41 0.2081 0.2348 0.2497 7.68% check_for_negative_density() 10 0.04015 0.1266 0.2154 6.63% FillPatchIterator::Initialize 41 0.1813 0.1991 0.2088 6.42% Gravity::get_new_grav_vector() 11 0.206 0.2077 0.2087 6.42% Castro::construct_old_gravity() 10 0.177 0.1824 0.1905 5.86% Gravity::get_old_grav_vector() 10 0.1763 0.1818 0.1898 5.84% Castro::construct_new_gravity() 10 0.1838 0.1849 0.1854 5.70% Castro::initialize_do_advance() 10 0.1703 0.1781 0.1829 5.63% Amr::init() 1 0.1647 0.1649 0.1651 5.08% FillPatchIterator::FillFromLevel0() 41 0.1268 0.1432 0.1519 4.67% FillPatchSingleLevel 41 0.1267 0.1431 0.1518 4.67% Amr::initialInit() 1 0.1495 0.1497 0.1499 4.61% Castro::expand_state() 10 0.1022 0.1225 0.1288 3.96% Castro::do_old_sources() 10 0.1109 0.1174 0.1239 3.81% Amr::InitializeInit() 1 0.05516 0.0897 0.1231 3.79% Amr::defBaseLevel() 1 0.05516 0.08969 0.1231 3.79% FabArray::ParallelCopy() 41 0.09729 0.1092 0.1177 3.62% Castro::clean_state() 62 0.1029 0.1053 0.1097 3.37% Castro::initData() 1 0.03921 0.07241 0.1056 3.25% Castro::estTimeStep() 21 0.0267 0.06349 0.1009 3.10% amrex::Copy() 193 0.07603 0.08489 0.09534 2.93% Amr::FinalizeInit() 1 0.02674 0.06004 0.09456 2.91% FabArray::ParallelCopy_finish() 41 0.06508 0.07104 0.07836 2.41% FabArray::setVal() 143 0.06713 0.06897 0.07309 2.25% Castro::computeInitialDt() 2 0.002481 0.03577 0.07028 2.16% Castro::initialize_advance() 10 0.06372 0.06619 0.06714 2.07% Castro::do_new_sources() 10 0.06 0.06302 0.06713 2.06% Castro::computeTemp() 63 0.06314 0.06511 0.06709 2.06% Castro::reset_internal_energy(MultiFab) 63 0.04471 0.04633 0.04762 1.46% Castro::reset_internal_energy(Fab) 1008 0.04443 0.04607 0.04735 1.46% FabArray::ParallelCopy_nowait() 41 0.03182 0.03809 0.04062 1.25% Castro::normalize_species() 62 0.03348 0.03458 0.03688 1.13% StateDataPhysBCFunct::() 41 0.02931 0.03378 0.03595 1.11% StateData::FillBoundary(geom) 41 0.02921 0.03366 0.03582 1.10% Castro::construct_new_source() 50 0.02875 0.02978 0.03137 0.96% Gravity::interpolate_monopole_grav() 21 0.02528 0.02559 0.02599 0.80% Castro::construct_new_gravity_source() 10 0.02242 0.02343 0.02488 0.77% Castro::post_init() 1 0.02398 0.02408 0.0242 0.74% Castro::construct_old_source() 50 0.008561 0.01187 0.02342 0.72% Castro::construct_old_gravity_source() 10 0.008488 0.01178 0.02327 0.72% Castro::finalize_do_advance() 10 0.01511 0.02014 0.02303 0.71% Amr::writePlotFile() 2 0.02273 0.02282 0.02287 0.70% Castro::apply_source_to_state() 20 0.01173 0.01375 0.01611 0.50% FabArray::Saxpy() 20 0.01167 0.01369 0.01603 0.49% Castro::post_timestep() 10 0.01388 0.01414 0.01458 0.45% FabArray::setDomainBndry() 41 0.008281 0.01129 0.01235 0.38% VisMF::Write(FabArray) 2 0.009249 0.009764 0.0123 0.38% Castro::Castro() 1 0.01028 0.01147 0.01209 0.37% Castro::check_for_nan() 20 0.009659 0.01056 0.0114 0.35% MultiFab::contains_nan() 20 0.009631 0.01053 0.01138 0.35% Castro::computeNewDt() 9 0.01001 0.01003 0.01004 0.31% Castro::initMFs() 1 0.006541 0.006874 0.007231 0.22% Other 265 0.02615 0.02935 0.03161 0.97% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 13 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 13 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8649 KiB 8659 KiB 8662 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6756 KiB 6763 KiB 6765 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7122 KiB 7130 KiB 7133 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4554 KiB 4558 KiB 4562 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 232 KiB 267 KiB 282 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 17 KiB 17 KiB 21 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2801 KiB 2802 KiB 2804 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 232 KiB 237 KiB 244 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 40 KiB 49 KiB 53 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2024 KiB 2027 KiB 2027 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 81 KiB 81 KiB 82 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 69 KiB 71 KiB 74 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.04-100-g9aaff4128aa5) finalized