Initializing AMReX (26.04-116-g6f2c4aff90ae)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.04-116-g6f2c4aff90ae) initialized Starting run at 05:36:16 UTC on 2026-05-01. Successfully read inputs file ... Castro git describe: 26.04-6-g9e0439ba0 AMReX git describe: 26.04-116-g6f2c4aff90 Microphysics git describe: 26.04-5-gb2bdcf8a reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013348479 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.316053658 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.317161286 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.314109676 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.316385588 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.353439536 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.285655151 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.277775751 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.278234687 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.277977038 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.273228193 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.006503469 seconds Ending run at 05:36:19 UTC on 2026-05-01. Run time = 3.186211825 Run time without initialization = 3.019141489 Average number of zones advanced per microsecond: 0.868 Average number of zones advanced per microsecond per rank: 0.109 TinyProfiler total time across processes [min...avg...max]: 3.1849 ... 3.1857 ... 3.1862 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 1.9844 2.0505 2.1301 66.85% Gravity::make_radial_gravity() 21 0.2819 0.2895 0.3068 9.63% check_for_negative_density() 10 0.02801 0.1079 0.1775 5.57% Castro::estTimeStep() 21 0.03483 0.06917 0.1079 3.39% Castro::initData() 1 0.03471 0.06901 0.1056 3.32% FabArray::ParallelCopy_finish() 41 0.03713 0.05026 0.08823 2.77% amrex::Copy() 193 0.06097 0.07918 0.08664 2.72% FabArray::setVal() 143 0.05624 0.06639 0.07237 2.27% Castro::reset_internal_energy(Fab) 1008 0.04215 0.04544 0.0466 1.46% FillPatchIterator::Initialize 41 0.03251 0.04193 0.0456 1.43% FabArray::ParallelCopy_nowait() 41 0.02699 0.03502 0.03806 1.19% Castro::normalize_species() 62 0.0341 0.0346 0.03546 1.11% StateData::FillBoundary(geom) 41 0.03017 0.03295 0.03542 1.11% Gravity::interpolate_monopole_grav() 21 0.02471 0.02539 0.02624 0.82% Castro::initialize_do_advance() 10 0.0175 0.02261 0.02556 0.80% Castro::construct_new_gravity_source() 10 0.02196 0.02317 0.02508 0.79% Castro::computeTemp() 63 0.01729 0.01847 0.01901 0.60% FabArray::Saxpy() 20 0.01078 0.01253 0.01416 0.44% Castro::initialize_advance() 10 0.006058 0.01017 0.01338 0.42% Amr::writePlotFile() 2 0.006747 0.009494 0.01207 0.38% FabArray::setDomainBndry() 41 0.008124 0.01044 0.01162 0.36% MultiFab::contains_nan() 20 0.009458 0.01044 0.01141 0.36% Castro::construct_old_gravity_source() 10 0.007172 0.00974 0.01049 0.33% VisMF::Write(FabArray) 2 0.006713 0.008001 0.01032 0.32% Amr::coarseTimeStep() 10 0.003517 0.005426 0.008477 0.27% Castro::initMFs() 1 0.006048 0.006529 0.007992 0.25% Castro::finalize_do_advance() 10 0.001114 0.005203 0.007119 0.22% Castro::enforce_min_density() 62 0.005992 0.00626 0.006832 0.21% Castro::construct_new_source() 50 0.005647 0.006113 0.006404 0.20% Gravity::get_new_grav_vector() 11 0.002799 0.003666 0.004174 0.13% Gravity::get_old_grav_vector() 10 0.001737 0.002601 0.00309 0.10% main() 1 0.001789 0.001959 0.00219 0.07% AmrLevel::FillPatch() 41 0.0007633 0.001007 0.001094 0.03% Amr::timeStep() 10 0.0001414 0.0001743 0.0003486 0.01% Castro::reset_internal_energy(MultiFab) 63 0.000238 0.0002428 0.0002496 0.01% Castro::do_advance_ctu() 10 0.0001435 0.0001668 0.000216 0.01% Castro::clean_state() 62 0.0001254 0.0001442 0.0001633 0.01% FillPatchIterator::FillFromLevel0() 41 0.0001088 0.0001142 0.0001251 0.00% StateDataPhysBCFunct::() 41 0.0001006 0.000107 0.0001182 0.00% Castro::Castro() 1 5.456e-05 9.186e-05 0.0001124 0.00% Castro::do_old_sources() 10 6.885e-05 8.993e-05 0.0001074 0.00% FabArray::ParallelCopy() 41 7.716e-05 8.318e-05 9.233e-05 0.00% Castro::construct_old_source() 50 4.644e-05 7.331e-05 8.647e-05 0.00% Amr::FinalizeInit() 1 3.67e-06 1.396e-05 8.159e-05 0.00% FillPatchSingleLevel 41 6.013e-05 6.964e-05 8.109e-05 0.00% Castro::subcycle_advance_ctu() 10 4.216e-05 5.705e-05 7.101e-05 0.00% Castro::do_new_sources() 10 5.327e-05 5.772e-05 6.552e-05 0.00% Castro::apply_source_to_state() 20 4.541e-05 5.156e-05 6.198e-05 0.00% Castro::advance() 10 3.507e-05 4.289e-05 5.092e-05 0.00% Amr::defBaseLevel() 1 3.432e-05 3.983e-05 4.607e-05 0.00% Castro::construct_old_gravity() 10 3.352e-05 3.849e-05 4.574e-05 0.00% Castro::construct_new_gravity() 10 3.086e-05 3.356e-05 4.138e-05 0.00% Castro::check_for_nan() 20 2.126e-05 2.436e-05 2.837e-05 0.00% Castro::expand_state() 10 1.813e-05 2.195e-05 2.487e-05 0.00% Castro::post_timestep() 10 1.373e-05 1.622e-05 2.009e-05 0.00% Castro::computeNewDt() 9 1.025e-05 1.127e-05 1.404e-05 0.00% Castro::post_init() 1 2.447e-06 4.941e-06 9.816e-06 0.00% Castro::computeInitialDt() 2 5.807e-06 7.455e-06 8.866e-06 0.00% Amr::InitializeInit() 1 2.374e-06 3.455e-06 6.379e-06 0.00% Amr::init() 1 1.843e-06 2.351e-06 2.836e-06 0.00% Amr::initialInit() 1 1.421e-06 1.749e-06 2.015e-06 0.00% Other 203 0.01031 0.01269 0.01552 0.49% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.185 3.186 3.186 100.00% Amr::coarseTimeStep() 10 3.011 3.011 3.011 94.49% Amr::timeStep() 10 2.991 2.994 2.996 94.02% Castro::advance() 10 2.976 2.979 2.981 93.56% Castro::subcycle_advance_ctu() 10 2.905 2.91 2.92 91.64% Castro::do_advance_ctu() 10 2.905 2.91 2.92 91.64% Castro::construct_ctu_hydro_source() 10 2.174 2.177 2.181 68.46% Gravity::make_radial_gravity() 21 0.2991 0.3071 0.3195 10.03% AmrLevel::FillPatch() 41 0.1963 0.203 0.2147 6.74% Gravity::get_new_grav_vector() 11 0.2053 0.2072 0.2096 6.58% Castro::construct_old_gravity() 10 0.1803 0.1856 0.1954 6.13% Gravity::get_old_grav_vector() 10 0.1795 0.1849 0.1947 6.11% FillPatchIterator::Initialize 41 0.1626 0.1711 0.1909 5.99% Castro::construct_new_gravity() 10 0.1844 0.1857 0.1873 5.88% check_for_negative_density() 10 0.02801 0.1079 0.1775 5.57% Castro::initialize_do_advance() 10 0.163 0.1672 0.1712 5.37% Amr::init() 1 0.1655 0.1663 0.1666 5.23% Amr::initialInit() 1 0.1515 0.1527 0.1532 4.81% FillPatchIterator::FillFromLevel0() 41 0.1065 0.1187 0.1458 4.58% FillPatchSingleLevel 41 0.1064 0.1186 0.1457 4.57% Amr::InitializeInit() 1 0.05459 0.08944 0.1266 3.97% Amr::defBaseLevel() 1 0.05459 0.08944 0.1266 3.97% Castro::expand_state() 10 0.1047 0.111 0.1181 3.71% FabArray::ParallelCopy() 41 0.0727 0.08546 0.1154 3.62% Castro::initData() 1 0.0382 0.07267 0.1091 3.42% Castro::estTimeStep() 21 0.03483 0.06917 0.1079 3.39% Castro::clean_state() 62 0.09948 0.1043 0.1069 3.36% Amr::FinalizeInit() 1 0.02494 0.06324 0.09857 3.09% Castro::do_old_sources() 10 0.09063 0.09382 0.09685 3.04% FabArray::ParallelCopy_finish() 41 0.03713 0.05026 0.08823 2.77% amrex::Copy() 193 0.06097 0.07918 0.08664 2.72% Castro::computeInitialDt() 2 0.002516 0.04038 0.07562 2.37% FabArray::setVal() 143 0.05624 0.06639 0.07237 2.27% Castro::initialize_advance() 10 0.05429 0.06611 0.07024 2.20% Castro::do_new_sources() 10 0.05786 0.06094 0.06608 2.07% Castro::computeTemp() 63 0.05968 0.06416 0.06581 2.07% Castro::reset_internal_energy(MultiFab) 63 0.04239 0.04568 0.04685 1.47% Castro::reset_internal_energy(Fab) 1008 0.04215 0.04544 0.0466 1.46% FabArray::ParallelCopy_nowait() 41 0.02709 0.03512 0.03815 1.20% StateDataPhysBCFunct::() 41 0.03028 0.03306 0.03552 1.11% Castro::normalize_species() 62 0.0341 0.0346 0.03546 1.11% StateData::FillBoundary(geom) 41 0.03017 0.03295 0.03542 1.11% Castro::construct_new_source() 50 0.02761 0.02928 0.03136 0.98% Castro::finalize_do_advance() 10 0.01703 0.02394 0.02835 0.89% Gravity::interpolate_monopole_grav() 21 0.02471 0.02539 0.02624 0.82% Castro::construct_new_gravity_source() 10 0.02196 0.02317 0.02508 0.79% Castro::post_init() 1 0.02252 0.02281 0.02302 0.72% Amr::writePlotFile() 2 0.02006 0.02017 0.02064 0.65% Castro::post_timestep() 10 0.01391 0.0142 0.01451 0.46% Castro::apply_source_to_state() 20 0.01082 0.01258 0.01422 0.45% FabArray::Saxpy() 20 0.01078 0.01253 0.01416 0.44% FabArray::setDomainBndry() 41 0.008124 0.01044 0.01162 0.36% Castro::Castro() 1 0.00961 0.01059 0.01154 0.36% Castro::check_for_nan() 20 0.00948 0.01046 0.01143 0.36% MultiFab::contains_nan() 20 0.009458 0.01044 0.01141 0.36% Castro::construct_old_source() 50 0.007218 0.009814 0.01058 0.33% Castro::construct_old_gravity_source() 10 0.007172 0.00974 0.01049 0.33% VisMF::Write(FabArray) 2 0.006713 0.008001 0.01032 0.32% Castro::computeNewDt() 9 0.01005 0.01007 0.01008 0.32% Castro::initMFs() 1 0.006048 0.006529 0.007992 0.25% Castro::enforce_min_density() 62 0.005992 0.00626 0.006832 0.21% Other 203 0.01922 0.02296 0.02661 0.84% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 4 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8647 KiB 8658 KiB 8661 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6747 KiB 6753 KiB 6757 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7121 KiB 7129 KiB 7130 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4542 KiB 4548 KiB 4567 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 229 KiB 236 KiB 252 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 13 KiB 15 KiB 19 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2792 KiB 2799 KiB 2802 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 239 KiB 245 KiB 255 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 33 KiB 39 KiB 54 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2024 KiB 2026 KiB 2027 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 82 KiB 83 KiB 84 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 72 KiB 74 KiB 78 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.04-116-g6f2c4aff90ae) finalized