Initializing AMReX (26.05-39-gbe2cc437644f)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.05-39-gbe2cc437644f) initialized Starting run at 05:27:31 UTC on 2026-05-07. Successfully read inputs file ... Castro git describe: 26.05-2-g7b8ad1db2 AMReX git describe: 26.05-39-gbe2cc4376 Microphysics git describe: 26.05-1-g106dcbb2 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014679332 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.325229044 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.318461455 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.316983599 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.320842779 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.374960201 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.280769414 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.274930942 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.275996505 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.276643207 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.273273653 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007668134 seconds Ending run at 05:27:34 UTC on 2026-05-07. Run time = 3.238087364 Run time without initialization = 3.048354436 Average number of zones advanced per microsecond: 0.860 Average number of zones advanced per microsecond per rank: 0.107 TinyProfiler total time across processes [min...avg...max]: 3.2332 ... 3.2361 ... 3.2382 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0019 2.0480 2.1191 65.44% Gravity::make_radial_gravity() 21 0.2824 0.2865 0.2971 9.17% check_for_negative_density() 10 0.03721 0.1075 0.1537 4.75% Castro::estTimeStep() 21 0.02661 0.07641 0.1224 3.78% Castro::initData() 1 0.03473 0.07388 0.1201 3.71% amrex::Copy() 193 0.07807 0.08676 0.09308 2.87% FabArray::ParallelCopy_finish() 41 0.04278 0.06402 0.08434 2.60% FabArray::setVal() 143 0.06365 0.06678 0.06964 2.15% Castro::reset_internal_energy(Fab) 1008 0.04474 0.04705 0.05442 1.68% FillPatchIterator::Initialize 41 0.03753 0.04586 0.05293 1.63% FabArray::ParallelCopy_nowait() 41 0.03222 0.03729 0.04034 1.25% Castro::normalize_species() 62 0.03397 0.03462 0.03543 1.09% StateData::FillBoundary(geom) 41 0.03103 0.03339 0.03537 1.09% Castro::initialize_do_advance() 10 0.01724 0.02387 0.0263 0.81% Castro::construct_new_gravity_source() 10 0.02188 0.02382 0.02601 0.80% Gravity::interpolate_monopole_grav() 21 0.02476 0.0251 0.02533 0.78% Castro::computeTemp() 63 0.01837 0.01894 0.02015 0.62% FabArray::Saxpy() 20 0.01233 0.0133 0.01424 0.44% Castro::initialize_advance() 10 0.006242 0.01019 0.0133 0.41% FabArray::setDomainBndry() 41 0.008562 0.01097 0.01299 0.40% VisMF::Write(FabArray) 2 0.008063 0.00874 0.01227 0.38% Amr::writePlotFile() 2 0.00714 0.01108 0.0122 0.38% Amr::coarseTimeStep() 10 0.004554 0.006512 0.01195 0.37% MultiFab::contains_nan() 20 0.009815 0.01058 0.01143 0.35% Castro::construct_old_gravity_source() 10 0.008601 0.01031 0.01106 0.34% Castro::initMFs() 1 0.006069 0.007467 0.01003 0.31% Castro::finalize_do_advance() 10 0.001335 0.006763 0.008259 0.26% StateData::define() 4 0.004938 0.005977 0.008058 0.25% Castro::construct_new_source() 50 0.006133 0.00635 0.006472 0.20% Gravity::get_new_grav_vector() 11 0.003582 0.003977 0.004327 0.13% Gravity::get_old_grav_vector() 10 0.0018 0.002623 0.003186 0.10% main() 1 0.001463 0.001838 0.002241 0.07% AmrLevel::FillPatch() 41 0.001108 0.001228 0.001348 0.04% StateDataPhysBCFunct::() 41 0.000102 0.0001898 0.0007395 0.02% Amr::timeStep() 10 0.0001471 0.0001924 0.0003985 0.01% Castro::reset_internal_energy(MultiFab) 63 0.000241 0.0002663 0.0003433 0.01% Castro::do_advance_ctu() 10 0.0001487 0.000166 0.0001947 0.01% Castro::clean_state() 62 0.0001299 0.0001487 0.0001635 0.01% FillPatchIterator::FillFromLevel0() 41 0.0001031 0.0001157 0.0001336 0.00% Castro::do_old_sources() 10 8.039e-05 0.0001012 0.0001273 0.00% Castro::construct_old_source() 50 6.75e-05 8.205e-05 9.24e-05 0.00% FabArray::ParallelCopy() 41 7.342e-05 8.345e-05 9.021e-05 0.00% Amr::FinalizeInit() 1 4.492e-06 1.535e-05 8.858e-05 0.00% FillPatchSingleLevel 41 5.989e-05 6.957e-05 8.442e-05 0.00% Castro::Castro() 1 5.381e-05 6.466e-05 7.735e-05 0.00% Castro::subcycle_advance_ctu() 10 4.203e-05 5.662e-05 7.178e-05 0.00% Castro::do_new_sources() 10 5.603e-05 6.318e-05 6.906e-05 0.00% Castro::apply_source_to_state() 20 4.748e-05 5.375e-05 6.622e-05 0.00% Amr::defBaseLevel() 1 3.453e-05 4.043e-05 5.23e-05 0.00% Castro::construct_old_gravity() 10 3.746e-05 4.356e-05 5.032e-05 0.00% Castro::advance() 10 3.641e-05 4.002e-05 4.81e-05 0.00% Castro::construct_new_gravity() 10 2.877e-05 3.389e-05 4.722e-05 0.00% Castro::check_for_nan() 20 2.322e-05 2.606e-05 3.037e-05 0.00% Castro::expand_state() 10 2.043e-05 2.229e-05 2.9e-05 0.00% Castro::post_timestep() 10 1.443e-05 1.907e-05 2.839e-05 0.00% AmrLevel::AmrLevel(dm) 1 6.492e-06 9.433e-06 1.651e-05 0.00% Castro::computeNewDt() 9 9.677e-06 1.011e-05 1.102e-05 0.00% Castro::computeInitialDt() 2 5.387e-06 6.268e-06 7.119e-06 0.00% Amr::InitializeInit() 1 2.393e-06 3.302e-06 5.158e-06 0.00% Castro::post_init() 1 2.396e-06 3.107e-06 3.782e-06 0.00% Amr::init() 1 1.89e-06 2.196e-06 2.612e-06 0.00% Amr::initialInit() 1 1.498e-06 1.811e-06 2.227e-06 0.00% Other 260 0.01162 0.01657 0.02 0.62% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.233 3.236 3.238 100.00% Amr::coarseTimeStep() 10 3.039 3.039 3.039 93.84% Amr::timeStep() 10 3.015 3.021 3.022 93.34% Castro::advance() 10 3 3.006 3.008 92.88% Castro::subcycle_advance_ctu() 10 2.932 2.936 2.947 91.01% Castro::do_advance_ctu() 10 2.932 2.936 2.947 91.01% Castro::construct_ctu_hydro_source() 10 2.171 2.174 2.18 67.31% Gravity::make_radial_gravity() 21 0.3016 0.3062 0.3163 9.77% AmrLevel::FillPatch() 41 0.2162 0.2276 0.2366 7.31% Gravity::get_new_grav_vector() 11 0.2075 0.2091 0.2101 6.49% FillPatchIterator::Initialize 41 0.1773 0.1921 0.2022 6.24% Castro::construct_old_gravity() 10 0.1866 0.1896 0.1984 6.13% Gravity::get_old_grav_vector() 10 0.1859 0.1889 0.1977 6.11% Amr::init() 1 0.1846 0.1876 0.1893 5.85% Castro::construct_new_gravity() 10 0.1835 0.1844 0.1854 5.73% Castro::initialize_do_advance() 10 0.1692 0.1724 0.175 5.40% Amr::initialInit() 1 0.1695 0.1727 0.1745 5.39% check_for_negative_density() 10 0.03721 0.1075 0.1537 4.75% FillPatchIterator::FillFromLevel0() 41 0.1177 0.1353 0.1517 4.68% FillPatchSingleLevel 41 0.1176 0.1351 0.1516 4.68% Amr::InitializeInit() 1 0.05717 0.09733 0.1436 4.43% Amr::defBaseLevel() 1 0.05716 0.09732 0.1436 4.43% Castro::initData() 1 0.03805 0.07733 0.1238 3.82% Castro::estTimeStep() 21 0.02661 0.07641 0.1224 3.78% Castro::expand_state() 10 0.1094 0.1141 0.1197 3.70% FabArray::ParallelCopy() 41 0.0833 0.1015 0.1195 3.69% Amr::FinalizeInit() 1 0.02923 0.07542 0.1172 3.62% Castro::do_old_sources() 10 0.1078 0.1121 0.1153 3.56% Castro::clean_state() 62 0.1049 0.1066 0.1145 3.54% amrex::Copy() 193 0.07807 0.08676 0.09308 2.87% Castro::computeInitialDt() 2 0.002869 0.04934 0.09104 2.81% FabArray::ParallelCopy_finish() 41 0.04278 0.06402 0.08434 2.60% Castro::computeTemp() 63 0.06347 0.06625 0.07492 2.31% Castro::initialize_advance() 10 0.05722 0.06698 0.07115 2.20% FabArray::setVal() 143 0.06365 0.06678 0.06964 2.15% Castro::do_new_sources() 10 0.05922 0.06279 0.06657 2.06% Castro::reset_internal_energy(MultiFab) 63 0.04498 0.04731 0.05476 1.69% Castro::reset_internal_energy(Fab) 1008 0.04474 0.04705 0.05442 1.68% FabArray::ParallelCopy_nowait() 41 0.03232 0.03738 0.04044 1.25% StateDataPhysBCFunct::() 41 0.03114 0.03358 0.03548 1.10% Castro::normalize_species() 62 0.03397 0.03462 0.03543 1.09% StateData::FillBoundary(geom) 41 0.03103 0.03339 0.03537 1.09% Castro::construct_new_source() 50 0.02822 0.03017 0.03244 1.00% Castro::finalize_do_advance() 10 0.02093 0.02374 0.02745 0.85% Castro::post_init() 1 0.02579 0.02598 0.02622 0.81% Castro::construct_new_gravity_source() 10 0.02188 0.02382 0.02601 0.80% Gravity::interpolate_monopole_grav() 21 0.02476 0.0251 0.02533 0.78% Amr::writePlotFile() 2 0.02234 0.02264 0.02287 0.71% Castro::post_timestep() 10 0.01387 0.01431 0.01461 0.45% Castro::apply_source_to_state() 20 0.01237 0.01336 0.01431 0.44% FabArray::Saxpy() 20 0.01233 0.0133 0.01424 0.44% Castro::Castro() 1 0.009345 0.01089 0.01387 0.43% FabArray::setDomainBndry() 41 0.008562 0.01097 0.01299 0.40% VisMF::Write(FabArray) 2 0.008063 0.00874 0.01227 0.38% Castro::check_for_nan() 20 0.009845 0.0106 0.01146 0.35% MultiFab::contains_nan() 20 0.009815 0.01058 0.01143 0.35% Castro::construct_old_source() 50 0.008672 0.01039 0.01115 0.34% Castro::construct_old_gravity_source() 10 0.008601 0.01031 0.01106 0.34% Castro::computeNewDt() 9 0.01007 0.01011 0.01014 0.31% Castro::initMFs() 1 0.006069 0.007467 0.01003 0.31% AmrLevel::AmrLevel(dm) 1 0.004945 0.005987 0.00807 0.25% StateData::define() 4 0.004938 0.005977 0.008058 0.25% Other 260 0.01555 0.02407 0.02959 0.91% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 13 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 3 B 6 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 13 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8640 KiB 8647 KiB 8655 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6703 KiB 6709 KiB 6711 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7114 KiB 7122 KiB 7125 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4507 KiB 4513 KiB 4530 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 242 KiB 254 KiB 265 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 15 KiB 16 KiB 21 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2771 KiB 2780 KiB 2781 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 237 KiB 240 KiB 248 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 35 KiB 43 KiB 53 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2022 KiB 2024 KiB 2026 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 82 KiB 82 KiB 83 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 73 KiB 74 KiB 78 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.05-39-gbe2cc437644f) finalized