Initializing AMReX (26.05-39-gbe2cc437644f)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.05-39-gbe2cc437644f) initialized Starting run at 05:17:48 UTC on 2026-05-08. Successfully read inputs file ... Castro git describe: 26.05-2-g7b8ad1db2 AMReX git describe: 26.05-39-gbe2cc4376 Microphysics git describe: 26.05-1-g106dcbb2 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.0139781 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.31661649 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.32590356 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.314113806 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.312675882 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.345026833 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.285084725 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.280761733 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.281157868 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.28255785 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.280437833 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.006755329 seconds Ending run at 05:17:51 UTC on 2026-05-08. Run time = 3.211274455 Run time without initialization = 3.033751257 Average number of zones advanced per microsecond: 0.864 Average number of zones advanced per microsecond per rank: 0.108 TinyProfiler total time across processes [min...avg...max]: 3.2072 ... 3.2100 ... 3.2113 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0262 2.0610 2.1024 65.47% Gravity::make_radial_gravity() 21 0.2841 0.2917 0.308 9.59% check_for_negative_density() 10 0.06477 0.1099 0.1466 4.56% Castro::estTimeStep() 21 0.03414 0.06875 0.108 3.36% Castro::initData() 1 0.03595 0.07269 0.1054 3.28% amrex::Copy() 193 0.06405 0.08102 0.08918 2.78% FabArray::ParallelCopy_finish() 41 0.03579 0.04872 0.08557 2.66% FabArray::setVal() 143 0.05734 0.06579 0.07116 2.22% Castro::reset_internal_energy(Fab) 1008 0.04289 0.04562 0.04732 1.47% FillPatchIterator::Initialize 41 0.03669 0.04267 0.04573 1.42% FabArray::ParallelCopy_nowait() 41 0.02723 0.0352 0.03823 1.19% StateData::FillBoundary(geom) 41 0.03123 0.03318 0.03635 1.13% Castro::normalize_species() 62 0.03434 0.03507 0.03599 1.12% Gravity::interpolate_monopole_grav() 21 0.02466 0.02526 0.02587 0.81% Castro::initialize_do_advance() 10 0.01565 0.02206 0.02505 0.78% Castro::construct_new_gravity_source() 10 0.02209 0.02325 0.02462 0.77% Castro::computeTemp() 63 0.01788 0.01861 0.01934 0.60% FabArray::Saxpy() 20 0.01088 0.0127 0.0135 0.42% Amr::writePlotFile() 2 0.006961 0.01001 0.01265 0.39% FabArray::setDomainBndry() 41 0.008082 0.01033 0.01243 0.39% Castro::initialize_advance() 10 0.006226 0.009085 0.01204 0.38% MultiFab::contains_nan() 20 0.00944 0.01029 0.01134 0.35% VisMF::Write(FabArray) 2 0.006908 0.008363 0.01092 0.34% Amr::coarseTimeStep() 10 0.003352 0.00636 0.01063 0.33% Castro::construct_old_gravity_source() 10 0.007221 0.009696 0.01061 0.33% Castro::initMFs() 1 0.006284 0.007589 0.01027 0.32% StateData::define() 4 0.005045 0.00612 0.008335 0.26% Castro::finalize_do_advance() 10 0.001119 0.005677 0.007231 0.23% Castro::construct_new_source() 50 0.005651 0.006074 0.006366 0.20% Gravity::get_new_grav_vector() 11 0.002765 0.003648 0.004032 0.13% Gravity::get_old_grav_vector() 10 0.00168 0.002594 0.003289 0.10% main() 1 0.00184 0.001907 0.001992 0.06% AmrLevel::FillPatch() 41 0.0008687 0.00101 0.001122 0.03% Amr::timeStep() 10 0.0001618 0.0002085 0.0004561 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002478 0.000259 0.0002748 0.01% Castro::do_advance_ctu() 10 0.0001579 0.0001785 0.0002051 0.01% Castro::clean_state() 62 0.0001341 0.0001481 0.0001599 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001042 0.0001143 0.0001281 0.00% StateDataPhysBCFunct::() 41 9.725e-05 0.0001094 0.0001214 0.00% Castro::do_old_sources() 10 7.976e-05 9.545e-05 0.0001156 0.00% FabArray::ParallelCopy() 41 7.258e-05 8.634e-05 0.0001088 0.00% Amr::FinalizeInit() 1 4.075e-06 1.688e-05 9.997e-05 0.00% Castro::construct_old_source() 50 6.43e-05 8.142e-05 9.188e-05 0.00% Castro::Castro() 1 5.208e-05 6.746e-05 8.463e-05 0.00% FillPatchSingleLevel 41 6.371e-05 6.869e-05 7.579e-05 0.00% Castro::subcycle_advance_ctu() 10 4.413e-05 5.754e-05 6.681e-05 0.00% Castro::do_new_sources() 10 5.254e-05 5.932e-05 6.624e-05 0.00% Castro::apply_source_to_state() 20 3.933e-05 5.19e-05 5.956e-05 0.00% Amr::defBaseLevel() 1 4.015e-05 4.846e-05 5.729e-05 0.00% Castro::construct_old_gravity() 10 3.614e-05 4.477e-05 5.26e-05 0.00% Castro::advance() 10 3.451e-05 4.285e-05 5.126e-05 0.00% Castro::construct_new_gravity() 10 2.954e-05 3.735e-05 4.297e-05 0.00% Castro::expand_state() 10 2.006e-05 2.695e-05 3.885e-05 0.00% Castro::post_timestep() 10 1.523e-05 1.911e-05 3.089e-05 0.00% Castro::check_for_nan() 20 2.244e-05 2.591e-05 2.921e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.206e-06 9.809e-06 1.587e-05 0.00% Castro::computeNewDt() 9 9.445e-06 1.101e-05 1.486e-05 0.00% Castro::post_init() 1 2.476e-06 5.184e-06 1.038e-05 0.00% Castro::computeInitialDt() 2 5.57e-06 7.196e-06 8.014e-06 0.00% Amr::InitializeInit() 1 2.838e-06 3.831e-06 7.469e-06 0.00% Amr::init() 1 1.97e-06 2.528e-06 2.846e-06 0.00% Amr::initialInit() 1 1.542e-06 2.038e-06 2.695e-06 0.00% Other 260 0.01153 0.01616 0.01934 0.60% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.207 3.21 3.211 100.00% Amr::coarseTimeStep() 10 3.025 3.025 3.025 94.20% Amr::timeStep() 10 3.003 3.008 3.011 93.75% Castro::advance() 10 2.988 2.993 2.995 93.25% Castro::subcycle_advance_ctu() 10 2.919 2.925 2.931 91.28% Castro::do_advance_ctu() 10 2.919 2.925 2.931 91.27% Castro::construct_ctu_hydro_source() 10 2.186 2.19 2.193 68.30% Gravity::make_radial_gravity() 21 0.3014 0.3099 0.3219 10.02% AmrLevel::FillPatch() 41 0.1957 0.2035 0.2158 6.72% Gravity::get_new_grav_vector() 11 0.2103 0.2114 0.2127 6.62% Castro::construct_old_gravity() 10 0.1774 0.1829 0.1919 5.98% Gravity::get_old_grav_vector() 10 0.1765 0.1822 0.1913 5.96% FillPatchIterator::Initialize 41 0.1619 0.1706 0.1902 5.92% Castro::construct_new_gravity() 10 0.1865 0.1876 0.1884 5.87% Amr::init() 1 0.1729 0.1758 0.1771 5.52% Castro::initialize_do_advance() 10 0.1646 0.1679 0.1708 5.32% Amr::initialInit() 1 0.1582 0.1615 0.163 5.07% check_for_negative_density() 10 0.06477 0.1099 0.1466 4.56% FillPatchIterator::FillFromLevel0() 41 0.1075 0.1176 0.1454 4.53% FillPatchSingleLevel 41 0.1073 0.1175 0.1453 4.53% Amr::InitializeInit() 1 0.05871 0.09648 0.1311 4.08% Amr::defBaseLevel() 1 0.0587 0.09648 0.1311 4.08% Castro::expand_state() 10 0.1078 0.1122 0.118 3.67% FabArray::ParallelCopy() 41 0.07284 0.08412 0.113 3.52% Castro::initData() 1 0.03935 0.0762 0.109 3.39% Castro::clean_state() 62 0.1013 0.1053 0.1087 3.39% Castro::estTimeStep() 21 0.03414 0.06875 0.108 3.36% Amr::FinalizeInit() 1 0.02712 0.06502 0.1026 3.20% Castro::do_old_sources() 10 0.0911 0.09411 0.0984 3.06% amrex::Copy() 193 0.06405 0.08102 0.08918 2.78% FabArray::ParallelCopy_finish() 41 0.03579 0.04872 0.08557 2.66% Castro::computeInitialDt() 2 0.002344 0.03979 0.07724 2.41% FabArray::setVal() 143 0.05734 0.06579 0.07116 2.22% Castro::initialize_advance() 10 0.05609 0.06531 0.06901 2.15% Castro::computeTemp() 63 0.06102 0.06449 0.06693 2.08% Castro::do_new_sources() 10 0.05816 0.06147 0.06584 2.05% Castro::reset_internal_energy(MultiFab) 63 0.04314 0.04588 0.04759 1.48% Castro::reset_internal_energy(Fab) 1008 0.04289 0.04562 0.04732 1.47% FabArray::ParallelCopy_nowait() 41 0.02734 0.03531 0.03833 1.19% StateDataPhysBCFunct::() 41 0.03135 0.03329 0.03647 1.14% StateData::FillBoundary(geom) 41 0.03123 0.03318 0.03635 1.13% Castro::normalize_species() 62 0.03434 0.03507 0.03599 1.12% Castro::construct_new_source() 50 0.02813 0.02933 0.03099 0.97% Castro::finalize_do_advance() 10 0.02128 0.02468 0.0293 0.91% Gravity::interpolate_monopole_grav() 21 0.02466 0.02526 0.02587 0.81% Castro::post_init() 1 0.02473 0.02498 0.02517 0.78% Castro::construct_new_gravity_source() 10 0.02209 0.02325 0.02462 0.77% Amr::writePlotFile() 2 0.02102 0.02115 0.02161 0.67% Castro::post_timestep() 10 0.01373 0.01441 0.01587 0.49% Castro::Castro() 1 0.009705 0.0112 0.01433 0.45% Castro::apply_source_to_state() 20 0.01092 0.01275 0.01355 0.42% FabArray::Saxpy() 20 0.01088 0.0127 0.0135 0.42% FabArray::setDomainBndry() 41 0.008082 0.01033 0.01243 0.39% Castro::check_for_nan() 20 0.009467 0.01032 0.01137 0.35% MultiFab::contains_nan() 20 0.00944 0.01029 0.01134 0.35% VisMF::Write(FabArray) 2 0.006908 0.008363 0.01092 0.34% Castro::construct_old_source() 50 0.007286 0.009777 0.0107 0.33% Castro::construct_old_gravity_source() 10 0.007221 0.009696 0.01061 0.33% Castro::initMFs() 1 0.006284 0.007589 0.01027 0.32% Castro::computeNewDt() 9 0.00997 0.00998 0.009988 0.31% AmrLevel::AmrLevel(dm) 1 0.005052 0.00613 0.008351 0.26% StateData::define() 4 0.005045 0.00612 0.008335 0.26% Other 260 0.01524 0.02351 0.02874 0.89% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 5 B 14 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8632 KiB 8646 KiB 8652 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6722 KiB 6733 KiB 6739 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7109 KiB 7122 KiB 7124 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4524 KiB 4534 KiB 4550 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 227 KiB 236 KiB 250 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 13 KiB 16 KiB 19 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2781 KiB 2790 KiB 2792 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 238 KiB 245 KiB 255 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 33 KiB 39 KiB 52 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2021 KiB 2024 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 84 KiB 84 KiB 84 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 70 KiB 72 KiB 76 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.05-39-gbe2cc437644f) finalized