Initializing AMReX (26.05-41-gba3cb0c68650)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.05-41-gba3cb0c68650) initialized Starting run at 05:19:00 UTC on 2026-05-12. Successfully read inputs file ... Castro git describe: 26.05-3-g308427cb3 AMReX git describe: 26.05-41-gba3cb0c68 Microphysics git describe: 26.05-1-g106dcbb2 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013704248 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.323277154 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.30494981 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.307885333 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.304215884 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.366154196 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.285354804 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.274192862 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.275147567 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.27456955 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.275148096 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.006707291 seconds Ending run at 05:19:03 UTC on 2026-05-12. Run time = 3.175757007 Run time without initialization = 3.000003485 Average number of zones advanced per microsecond: 0.874 Average number of zones advanced per microsecond per rank: 0.109 TinyProfiler total time across processes [min...avg...max]: 3.1714 ... 3.1744 ... 3.1758 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 1.9782 2.0532 2.1041 66.26% Gravity::make_radial_gravity() 21 0.2864 0.2922 0.308 9.70% check_for_negative_density() 10 0.03135 0.08287 0.1616 5.09% Castro::initData() 1 0.03461 0.0726 0.1121 3.53% Castro::estTimeStep() 21 0.03584 0.07084 0.1065 3.35% amrex::Copy() 193 0.0626 0.07964 0.08724 2.75% FabArray::ParallelCopy_finish() 41 0.03215 0.0463 0.0849 2.67% FabArray::setVal() 143 0.05435 0.0647 0.06931 2.18% Castro::reset_internal_energy(Fab) 1008 0.04535 0.04614 0.04774 1.50% FillPatchIterator::Initialize 41 0.03653 0.04406 0.04721 1.49% FabArray::ParallelCopy_nowait() 41 0.02788 0.03605 0.03978 1.25% Castro::normalize_species() 62 0.03382 0.03477 0.03608 1.14% StateData::FillBoundary(geom) 41 0.03041 0.03285 0.03529 1.11% Castro::initialize_do_advance() 10 0.01233 0.02226 0.02812 0.89% Gravity::interpolate_monopole_grav() 21 0.02497 0.02544 0.02603 0.82% Castro::construct_new_gravity_source() 10 0.02215 0.02335 0.02545 0.80% Castro::computeTemp() 63 0.01817 0.01872 0.01939 0.61% FabArray::Saxpy() 20 0.01057 0.0125 0.0135 0.43% Castro::initialize_advance() 10 0.005235 0.01008 0.01328 0.42% Amr::writePlotFile() 2 0.006936 0.009817 0.0127 0.40% FabArray::setDomainBndry() 41 0.00752 0.01067 0.01253 0.39% MultiFab::contains_nan() 20 0.009466 0.009969 0.0108 0.34% VisMF::Write(FabArray) 2 0.006736 0.008207 0.01069 0.34% Castro::construct_old_gravity_source() 10 0.006956 0.00952 0.01047 0.33% Castro::initMFs() 1 0.006095 0.007346 0.009882 0.31% Castro::finalize_do_advance() 10 0.001333 0.006709 0.009839 0.31% Amr::coarseTimeStep() 10 0.001762 0.00458 0.009648 0.30% StateData::define() 4 0.004976 0.005993 0.007958 0.25% Castro::construct_new_source() 50 0.005538 0.006201 0.006425 0.20% Gravity::get_new_grav_vector() 11 0.00271 0.003735 0.004094 0.13% Gravity::get_old_grav_vector() 10 0.001885 0.002503 0.002721 0.09% main() 1 0.001692 0.001871 0.001966 0.06% AmrLevel::FillPatch() 41 0.0006783 0.0009618 0.001171 0.04% Amr::timeStep() 10 0.0001431 0.0001814 0.0003397 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002453 0.0002542 0.0002715 0.01% Castro::do_advance_ctu() 10 0.000136 0.0001548 0.0001716 0.01% Castro::clean_state() 62 0.0001295 0.0001398 0.0001594 0.01% FillPatchIterator::FillFromLevel0() 41 9.665e-05 0.0001109 0.0001213 0.00% StateDataPhysBCFunct::() 41 9.183e-05 0.000103 0.0001117 0.00% Castro::do_old_sources() 10 6.137e-05 9.098e-05 0.0001034 0.00% Castro::construct_old_source() 50 4.743e-05 7.459e-05 8.989e-05 0.00% FabArray::ParallelCopy() 41 7.117e-05 7.942e-05 8.435e-05 0.00% Amr::FinalizeInit() 1 3.266e-06 1.399e-05 8.286e-05 0.00% Castro::Castro() 1 4.99e-05 6.557e-05 7.498e-05 0.00% Amr::defBaseLevel() 1 3.526e-05 4.86e-05 7.092e-05 0.00% FillPatchSingleLevel 41 5.853e-05 6.546e-05 7.044e-05 0.00% Castro::do_new_sources() 10 4.491e-05 6.065e-05 6.932e-05 0.00% Castro::subcycle_advance_ctu() 10 4.97e-05 5.698e-05 6.734e-05 0.00% Castro::apply_source_to_state() 20 3.574e-05 5.048e-05 6.067e-05 0.00% Castro::construct_old_gravity() 10 2.89e-05 3.967e-05 4.748e-05 0.00% Castro::construct_new_gravity() 10 3.018e-05 3.496e-05 4.543e-05 0.00% Castro::advance() 10 3.585e-05 3.877e-05 4.295e-05 0.00% Castro::check_for_nan() 20 2.061e-05 2.465e-05 2.756e-05 0.00% Castro::expand_state() 10 1.808e-05 2.21e-05 2.381e-05 0.00% Castro::post_timestep() 10 1.552e-05 1.687e-05 1.834e-05 0.00% AmrLevel::AmrLevel(dm) 1 6.392e-06 9.133e-06 1.379e-05 0.00% Castro::post_init() 1 2.574e-06 4.525e-06 1.089e-05 0.00% Castro::computeNewDt() 9 8.923e-06 9.792e-06 1.047e-05 0.00% Amr::InitializeInit() 1 2.364e-06 3.746e-06 8.273e-06 0.00% Castro::computeInitialDt() 2 5.871e-06 6.797e-06 7.758e-06 0.00% Amr::init() 1 1.829e-06 2.228e-06 2.65e-06 0.00% Amr::initialInit() 1 1.551e-06 1.923e-06 2.491e-06 0.00% Other 260 0.01132 0.01596 0.01907 0.60% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.171 3.174 3.176 100.00% Amr::coarseTimeStep() 10 2.991 2.991 2.991 94.19% Amr::timeStep() 10 2.97 2.975 2.978 93.78% Castro::advance() 10 2.955 2.961 2.964 93.33% Castro::subcycle_advance_ctu() 10 2.887 2.892 2.905 91.47% Castro::do_advance_ctu() 10 2.887 2.892 2.905 91.47% Castro::construct_ctu_hydro_source() 10 2.152 2.155 2.159 67.98% Gravity::make_radial_gravity() 21 0.3033 0.3098 0.3207 10.10% AmrLevel::FillPatch() 41 0.1894 0.2029 0.217 6.83% Gravity::get_new_grav_vector() 11 0.2067 0.2074 0.2081 6.55% Castro::construct_old_gravity() 10 0.1812 0.1871 0.196 6.17% Gravity::get_old_grav_vector() 10 0.1804 0.1864 0.1953 6.15% FillPatchIterator::Initialize 41 0.1584 0.1704 0.192 6.05% Castro::construct_new_gravity() 10 0.185 0.1858 0.1863 5.87% Amr::init() 1 0.1711 0.1739 0.1753 5.52% Castro::initialize_do_advance() 10 0.159 0.1669 0.1718 5.41% check_for_negative_density() 10 0.03135 0.08287 0.1616 5.09% Amr::initialInit() 1 0.1573 0.16 0.1615 5.09% FillPatchIterator::FillFromLevel0() 41 0.1027 0.1157 0.1445 4.55% FillPatchSingleLevel 41 0.1026 0.1156 0.1444 4.55% Amr::InitializeInit() 1 0.05597 0.09589 0.1352 4.26% Amr::defBaseLevel() 1 0.05596 0.09589 0.1352 4.26% Castro::expand_state() 10 0.1041 0.1109 0.1201 3.78% Castro::initData() 1 0.03818 0.07608 0.1154 3.63% FabArray::ParallelCopy() 41 0.06935 0.08253 0.113 3.56% Castro::clean_state() 62 0.1035 0.1056 0.1088 3.43% Castro::estTimeStep() 21 0.03584 0.07084 0.1065 3.35% Amr::FinalizeInit() 1 0.02487 0.06413 0.1044 3.29% Castro::do_old_sources() 10 0.08934 0.09405 0.09796 3.08% amrex::Copy() 193 0.0626 0.07964 0.08724 2.75% FabArray::ParallelCopy_finish() 41 0.03215 0.0463 0.0849 2.67% Castro::computeInitialDt() 2 0.002332 0.04112 0.08132 2.56% Castro::initialize_advance() 10 0.05223 0.0658 0.07102 2.24% FabArray::setVal() 143 0.05435 0.0647 0.06931 2.18% Castro::computeTemp() 63 0.0638 0.06511 0.06737 2.12% Castro::do_new_sources() 10 0.05809 0.06152 0.06635 2.09% Castro::reset_internal_energy(MultiFab) 63 0.04561 0.04639 0.04798 1.51% Castro::reset_internal_energy(Fab) 1008 0.04535 0.04614 0.04774 1.50% FabArray::ParallelCopy_nowait() 41 0.02799 0.03615 0.03987 1.26% Castro::normalize_species() 62 0.03382 0.03477 0.03608 1.14% StateDataPhysBCFunct::() 41 0.03052 0.03296 0.03539 1.11% StateData::FillBoundary(geom) 41 0.03041 0.03285 0.03529 1.11% Castro::construct_new_source() 50 0.02769 0.02955 0.03188 1.00% Castro::finalize_do_advance() 10 0.01594 0.0262 0.03105 0.98% Gravity::interpolate_monopole_grav() 21 0.02497 0.02544 0.02603 0.82% Castro::construct_new_gravity_source() 10 0.02215 0.02335 0.02545 0.80% Castro::post_init() 1 0.02256 0.02281 0.02301 0.72% Amr::writePlotFile() 2 0.02058 0.0207 0.02118 0.67% Castro::post_timestep() 10 0.01377 0.01426 0.01476 0.46% Castro::Castro() 1 0.009495 0.01088 0.01394 0.44% Castro::apply_source_to_state() 20 0.01061 0.01255 0.01356 0.43% FabArray::Saxpy() 20 0.01057 0.0125 0.0135 0.43% FabArray::setDomainBndry() 41 0.00752 0.01067 0.01253 0.39% Castro::check_for_nan() 20 0.00949 0.009994 0.01082 0.34% MultiFab::contains_nan() 20 0.009466 0.009969 0.0108 0.34% VisMF::Write(FabArray) 2 0.006736 0.008207 0.01069 0.34% Castro::construct_old_source() 50 0.007003 0.009594 0.01056 0.33% Castro::construct_old_gravity_source() 10 0.006956 0.00952 0.01047 0.33% Castro::computeNewDt() 9 0.01024 0.01025 0.01026 0.32% Castro::initMFs() 1 0.006095 0.007346 0.009882 0.31% AmrLevel::AmrLevel(dm) 1 0.004986 0.006002 0.007969 0.25% StateData::define() 4 0.004976 0.005993 0.007958 0.25% Other 260 0.01546 0.02336 0.02809 0.88% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8639 KiB 8646 KiB 8652 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6726 KiB 6733 KiB 6736 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7114 KiB 7121 KiB 7123 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4523 KiB 4532 KiB 4553 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 221 KiB 237 KiB 256 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 12 KiB 16 KiB 19 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2783 KiB 2791 KiB 2795 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 243 KiB 248 KiB 257 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 31 KiB 38 KiB 53 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2022 KiB 2024 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 83 KiB 83 KiB 84 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 72 KiB 75 KiB 78 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.05-41-gba3cb0c68650) finalized