Initializing AMReX (26.05-41-gba3cb0c68650)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.05-41-gba3cb0c68650) initialized Starting run at 05:16:59 UTC on 2026-05-13. Successfully read inputs file ... Castro git describe: 26.05-3-g308427cb3 AMReX git describe: 26.05-41-gba3cb0c68 Microphysics git describe: 26.05-1-g106dcbb2 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013439068 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.314845649 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.314346192 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.307872512 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.312805217 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.359519507 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.284882878 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.277076991 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.273645793 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.274301774 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.274686107 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.006661251 seconds Ending run at 05:17:03 UTC on 2026-05-13. Run time = 3.177640656 Run time without initialization = 3.003334998 Average number of zones advanced per microsecond: 0.873 Average number of zones advanced per microsecond per rank: 0.109 TinyProfiler total time across processes [min...avg...max]: 3.1732 ... 3.1758 ... 3.1780 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 1.9709 2.0366 2.1265 66.91% Gravity::make_radial_gravity() 21 0.2826 0.287 0.3028 9.53% check_for_negative_density() 10 0.02753 0.1203 0.191 6.01% Castro::estTimeStep() 21 0.03694 0.07378 0.1123 3.53% Castro::initData() 1 0.03417 0.06955 0.1088 3.42% FabArray::ParallelCopy_finish() 41 0.03257 0.05098 0.0997 3.14% amrex::Copy() 193 0.05699 0.0771 0.08559 2.69% FabArray::setVal() 143 0.0374 0.06027 0.06862 2.16% Castro::reset_internal_energy(Fab) 1008 0.04383 0.04514 0.0462 1.45% FillPatchIterator::Initialize 41 0.03663 0.0421 0.04548 1.43% FabArray::ParallelCopy_nowait() 41 0.02397 0.03388 0.03728 1.17% Castro::normalize_species() 62 0.03415 0.03485 0.03587 1.13% StateData::FillBoundary(geom) 41 0.03104 0.0327 0.03398 1.07% Castro::initialize_do_advance() 10 0.01622 0.02189 0.02594 0.82% Gravity::interpolate_monopole_grav() 21 0.02487 0.02507 0.02547 0.80% Castro::construct_new_gravity_source() 10 0.01771 0.02224 0.02434 0.77% Castro::computeTemp() 63 0.01807 0.0184 0.0186 0.59% FabArray::Saxpy() 20 0.00941 0.0119 0.01306 0.41% Castro::initialize_advance() 10 0.005984 0.008691 0.01212 0.38% Amr::writePlotFile() 2 0.006833 0.009554 0.01204 0.38% FabArray::setDomainBndry() 41 0.007811 0.01001 0.01181 0.37% MultiFab::contains_nan() 20 0.009591 0.01019 0.01113 0.35% VisMF::Write(FabArray) 2 0.006911 0.008175 0.01051 0.33% Castro::construct_old_gravity_source() 10 0.005255 0.009316 0.01035 0.33% Amr::coarseTimeStep() 10 0.003101 0.00506 0.009666 0.30% StateData::define() 4 0.004977 0.005991 0.008537 0.27% Castro::initMFs() 1 0.00625 0.006837 0.008036 0.25% Castro::finalize_do_advance() 10 0.001078 0.005788 0.007392 0.23% Castro::construct_new_source() 50 0.00517 0.005912 0.006312 0.20% Gravity::get_new_grav_vector() 11 0.002777 0.003601 0.004051 0.13% Gravity::get_old_grav_vector() 10 0.001728 0.002491 0.002875 0.09% main() 1 0.001826 0.002015 0.002324 0.07% AmrLevel::FillPatch() 41 0.0008297 0.0009884 0.001135 0.04% Amr::timeStep() 10 0.0001427 0.0001894 0.0003745 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002403 0.0002509 0.0002646 0.01% Castro::do_advance_ctu() 10 0.0001464 0.0001687 0.000194 0.01% Castro::clean_state() 62 0.0001323 0.0001408 0.0001455 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001077 0.0001111 0.0001181 0.00% StateDataPhysBCFunct::() 41 9.703e-05 0.0001015 0.0001087 0.00% Castro::do_old_sources() 10 7.498e-05 9.199e-05 0.0001077 0.00% FabArray::ParallelCopy() 41 7.116e-05 8.11e-05 9.467e-05 0.00% Amr::FinalizeInit() 1 3.126e-06 1.495e-05 8.977e-05 0.00% Castro::construct_old_source() 50 5.907e-05 7.518e-05 8.964e-05 0.00% Castro::Castro() 1 5.447e-05 6.659e-05 8.263e-05 0.00% FillPatchSingleLevel 41 6.317e-05 6.825e-05 7.497e-05 0.00% Castro::do_new_sources() 10 5.179e-05 5.913e-05 6.589e-05 0.00% Castro::subcycle_advance_ctu() 10 4.042e-05 5.297e-05 6.207e-05 0.00% Castro::construct_old_gravity() 10 4.03e-05 4.643e-05 5.953e-05 0.00% Castro::apply_source_to_state() 20 4.483e-05 5.216e-05 5.77e-05 0.00% Castro::advance() 10 3.059e-05 4e-05 4.912e-05 0.00% Amr::defBaseLevel() 1 3.568e-05 3.993e-05 4.764e-05 0.00% Castro::construct_new_gravity() 10 3.15e-05 3.519e-05 4.25e-05 0.00% Castro::check_for_nan() 20 2.225e-05 2.567e-05 2.821e-05 0.00% Castro::expand_state() 10 2.019e-05 2.397e-05 2.652e-05 0.00% Castro::post_timestep() 10 1.465e-05 1.8e-05 2.393e-05 0.00% AmrLevel::AmrLevel(dm) 1 6.336e-06 9.273e-06 1.649e-05 0.00% Castro::computeNewDt() 9 9.161e-06 1.006e-05 1.057e-05 0.00% Castro::computeInitialDt() 2 5.63e-06 6.917e-06 8.931e-06 0.00% Amr::InitializeInit() 1 2.585e-06 3.368e-06 6.281e-06 0.00% Castro::post_init() 1 2.182e-06 2.82e-06 3.553e-06 0.00% Amr::init() 1 1.816e-06 2.254e-06 2.89e-06 0.00% Amr::initialInit() 1 1.279e-06 1.844e-06 2.617e-06 0.00% Other 260 0.01142 0.01563 0.01886 0.59% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.173 3.176 3.178 100.00% Amr::coarseTimeStep() 10 2.994 2.994 2.995 94.23% Amr::timeStep() 10 2.974 2.978 2.98 93.77% Castro::advance() 10 2.959 2.964 2.966 93.33% Castro::subcycle_advance_ctu() 10 2.896 2.9 2.913 91.67% Castro::do_advance_ctu() 10 2.896 2.9 2.913 91.67% Castro::construct_ctu_hydro_source() 10 2.172 2.176 2.181 68.63% Gravity::make_radial_gravity() 21 0.3006 0.3044 0.3161 9.95% AmrLevel::FillPatch() 41 0.1908 0.2012 0.2235 7.03% Gravity::get_new_grav_vector() 11 0.2019 0.2041 0.2056 6.47% FillPatchIterator::Initialize 41 0.1568 0.1701 0.2006 6.31% check_for_negative_density() 10 0.02753 0.1203 0.191 6.01% Castro::construct_old_gravity() 10 0.1788 0.1829 0.1904 5.99% Gravity::get_old_grav_vector() 10 0.1781 0.1822 0.1898 5.97% Castro::construct_new_gravity() 10 0.1806 0.1821 0.1833 5.77% Castro::initialize_do_advance() 10 0.1634 0.1675 0.1747 5.50% Amr::init() 1 0.1695 0.1722 0.174 5.48% Amr::initialInit() 1 0.1556 0.1586 0.1604 5.05% FillPatchIterator::FillFromLevel0() 41 0.1008 0.118 0.1557 4.90% FillPatchSingleLevel 41 0.1007 0.1179 0.1556 4.90% Amr::InitializeInit() 1 0.05639 0.09179 0.1303 4.10% Amr::defBaseLevel() 1 0.05639 0.09179 0.1303 4.10% Castro::expand_state() 10 0.1046 0.1121 0.1254 3.94% FabArray::ParallelCopy() 41 0.0691 0.08504 0.1239 3.90% Castro::estTimeStep() 21 0.03694 0.07378 0.1123 3.53% Castro::initData() 1 0.03785 0.0729 0.1119 3.52% Castro::clean_state() 62 0.1028 0.1044 0.1063 3.35% Amr::FinalizeInit() 1 0.02527 0.06681 0.1034 3.25% FabArray::ParallelCopy_finish() 41 0.03257 0.05098 0.0997 3.14% Castro::do_old_sources() 10 0.08694 0.09106 0.09459 2.98% amrex::Copy() 193 0.05699 0.0771 0.08559 2.69% Castro::computeInitialDt() 2 0.0024 0.04361 0.08015 2.52% FabArray::setVal() 143 0.0374 0.06027 0.06862 2.16% Castro::do_new_sources() 10 0.04898 0.05937 0.06704 2.11% Castro::initialize_advance() 10 0.04477 0.06067 0.06547 2.06% Castro::computeTemp() 63 0.06229 0.0638 0.06491 2.04% Castro::reset_internal_energy(MultiFab) 63 0.04408 0.04539 0.04646 1.46% Castro::reset_internal_energy(Fab) 1008 0.04383 0.04514 0.0462 1.45% FabArray::ParallelCopy_nowait() 41 0.0241 0.03398 0.03737 1.18% Castro::normalize_species() 62 0.03415 0.03485 0.03587 1.13% Castro::finalize_do_advance() 10 0.01958 0.02601 0.03471 1.09% StateDataPhysBCFunct::() 41 0.03114 0.0328 0.03408 1.07% StateData::FillBoundary(geom) 41 0.03104 0.0327 0.03398 1.07% Castro::construct_new_source() 50 0.02288 0.02815 0.03062 0.96% Gravity::interpolate_monopole_grav() 21 0.02487 0.02507 0.02547 0.80% Castro::construct_new_gravity_source() 10 0.01771 0.02224 0.02434 0.77% Castro::post_init() 1 0.02287 0.02307 0.02319 0.73% Amr::writePlotFile() 2 0.02027 0.02037 0.02071 0.65% Castro::post_timestep() 10 0.01383 0.01427 0.01461 0.46% Castro::apply_source_to_state() 20 0.009455 0.01195 0.01312 0.41% FabArray::Saxpy() 20 0.00941 0.0119 0.01306 0.41% FabArray::setDomainBndry() 41 0.007811 0.01001 0.01181 0.37% Castro::Castro() 1 0.009223 0.01013 0.01122 0.35% Castro::check_for_nan() 20 0.009618 0.01021 0.01116 0.35% MultiFab::contains_nan() 20 0.009591 0.01019 0.01113 0.35% VisMF::Write(FabArray) 2 0.006911 0.008175 0.01051 0.33% Castro::construct_old_source() 50 0.005314 0.009391 0.01043 0.33% Castro::construct_old_gravity_source() 10 0.005255 0.009316 0.01035 0.33% Castro::computeNewDt() 9 0.009948 0.009965 0.009993 0.31% AmrLevel::AmrLevel(dm) 1 0.004985 0.006 0.008553 0.27% StateData::define() 4 0.004977 0.005991 0.008537 0.27% Castro::initMFs() 1 0.00625 0.006837 0.008036 0.25% Other 260 0.01451 0.02258 0.02861 0.90% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 3 B 6 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8639 KiB 8647 KiB 8653 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6728 KiB 6736 KiB 6741 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7112 KiB 7121 KiB 7124 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4536 KiB 4544 KiB 4570 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 223 KiB 237 KiB 266 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 13 KiB 15 KiB 19 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2784 KiB 2792 KiB 2795 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 240 KiB 244 KiB 253 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 31 KiB 40 KiB 59 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2022 KiB 2024 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 81 KiB 82 KiB 83 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 71 KiB 73 KiB 76 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.05-41-gba3cb0c68650) finalized