Initializing AMReX (26.05-41-gba3cb0c68650)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.05-41-gba3cb0c68650) initialized Starting run at 05:17:11 UTC on 2026-05-14. Successfully read inputs file ... Castro git describe: 26.05-3-g308427cb3 AMReX git describe: 26.05-41-gba3cb0c68 Microphysics git describe: 26.05-1-g106dcbb2 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013512554 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.326565738 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.304761387 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.320355692 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.31694392 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.353541865 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.285378288 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.279211657 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.279027406 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.278912454 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.27937862 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.006681123 seconds Ending run at 05:17:14 UTC on 2026-05-14. Run time = 3.202110961 Run time without initialization = 3.033332422 Average number of zones advanced per microsecond: 0.864 Average number of zones advanced per microsecond per rank: 0.108 TinyProfiler total time across processes [min...avg...max]: 3.2007 ... 3.2017 ... 3.2021 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 1.9987 2.0500 2.1166 66.10% Gravity::make_radial_gravity() 21 0.2827 0.2888 0.3093 9.66% check_for_negative_density() 10 0.05701 0.1226 0.1785 5.57% Castro::initData() 1 0.03745 0.06952 0.1076 3.36% Castro::estTimeStep() 21 0.03481 0.07084 0.1054 3.29% FabArray::ParallelCopy_finish() 41 0.03365 0.04828 0.08923 2.79% amrex::Copy() 193 0.05996 0.08104 0.08776 2.74% FabArray::setVal() 143 0.05526 0.06616 0.07208 2.25% Castro::reset_internal_energy(Fab) 1008 0.04305 0.0451 0.04699 1.47% FillPatchIterator::Initialize 41 0.03679 0.04288 0.04575 1.43% FabArray::ParallelCopy_nowait() 41 0.02551 0.03508 0.03859 1.21% StateData::FillBoundary(geom) 41 0.03026 0.03279 0.03543 1.11% Castro::normalize_species() 62 0.0339 0.03453 0.03522 1.10% Castro::initialize_do_advance() 10 0.01609 0.02253 0.0257 0.80% Gravity::interpolate_monopole_grav() 21 0.02485 0.02526 0.02554 0.80% Castro::construct_new_gravity_source() 10 0.02178 0.02334 0.02552 0.80% Castro::computeTemp() 63 0.01776 0.01834 0.01898 0.59% FabArray::Saxpy() 20 0.0106 0.01266 0.01358 0.42% Castro::initialize_advance() 10 0.006016 0.009805 0.01234 0.39% Amr::writePlotFile() 2 0.006933 0.009806 0.01232 0.38% FabArray::setDomainBndry() 41 0.007897 0.01034 0.01216 0.38% MultiFab::contains_nan() 20 0.00957 0.0102 0.01105 0.35% Castro::construct_old_gravity_source() 10 0.006914 0.0097 0.01061 0.33% VisMF::Write(FabArray) 2 0.006876 0.008141 0.01054 0.33% Amr::coarseTimeStep() 10 0.002811 0.004749 0.00979 0.31% Castro::initMFs() 1 0.006148 0.00684 0.007942 0.25% Castro::finalize_do_advance() 10 0.001004 0.005852 0.007339 0.23% Castro::enforce_min_density() 62 0.006176 0.006516 0.006895 0.22% Castro::construct_new_source() 50 0.005502 0.006118 0.006455 0.20% Gravity::get_new_grav_vector() 11 0.002666 0.003651 0.00415 0.13% Gravity::get_old_grav_vector() 10 0.001619 0.002664 0.003545 0.11% main() 1 0.001645 0.001984 0.002165 0.07% AmrLevel::FillPatch() 41 0.0008057 0.001151 0.001302 0.04% Amr::timeStep() 10 0.0001315 0.0001818 0.0003851 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002406 0.0002461 0.0002562 0.01% Castro::do_advance_ctu() 10 0.0001318 0.0001573 0.0001806 0.01% Castro::clean_state() 62 0.0001305 0.0001408 0.0001544 0.00% FillPatchIterator::FillFromLevel0() 41 9.775e-05 0.0001091 0.0001214 0.00% StateDataPhysBCFunct::() 41 9.174e-05 0.0001018 0.000118 0.00% Castro::do_old_sources() 10 7.936e-05 9.227e-05 0.0001085 0.00% FabArray::ParallelCopy() 41 7.033e-05 7.833e-05 8.811e-05 0.00% Castro::construct_old_source() 50 5.621e-05 7.394e-05 8.784e-05 0.00% Amr::FinalizeInit() 1 3.679e-06 1.593e-05 8.379e-05 0.00% Castro::Castro() 1 5.232e-05 6.729e-05 8.197e-05 0.00% FillPatchSingleLevel 41 6.067e-05 6.91e-05 7.487e-05 0.00% Castro::do_new_sources() 10 5.357e-05 6.172e-05 7.224e-05 0.00% Castro::subcycle_advance_ctu() 10 4.244e-05 5.633e-05 7.114e-05 0.00% Castro::advance() 10 3.027e-05 4.283e-05 5.52e-05 0.00% Castro::apply_source_to_state() 20 3.986e-05 4.876e-05 5.319e-05 0.00% Castro::construct_old_gravity() 10 3.4e-05 4.059e-05 4.517e-05 0.00% Amr::defBaseLevel() 1 3.325e-05 3.872e-05 4.394e-05 0.00% Castro::construct_new_gravity() 10 2.828e-05 3.373e-05 4.204e-05 0.00% Castro::expand_state() 10 1.988e-05 2.23e-05 2.545e-05 0.00% Castro::check_for_nan() 20 2.188e-05 2.382e-05 2.531e-05 0.00% Castro::post_timestep() 10 1.374e-05 1.767e-05 2.398e-05 0.00% Castro::computeNewDt() 9 9.346e-06 1.02e-05 1.242e-05 0.00% Castro::post_init() 1 2.003e-06 4.303e-06 9.318e-06 0.00% Castro::computeInitialDt() 2 5.661e-06 6.518e-06 8.04e-06 0.00% Amr::InitializeInit() 1 2.348e-06 3.283e-06 6.753e-06 0.00% Amr::init() 1 1.741e-06 1.982e-06 2.507e-06 0.00% Amr::initialInit() 1 1.608e-06 1.885e-06 2.408e-06 0.00% Other 203 0.01029 0.0126 0.01445 0.45% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.201 3.202 3.202 100.00% Amr::coarseTimeStep() 10 3.025 3.025 3.025 94.46% Amr::timeStep() 10 3.003 3.008 3.01 94.01% Castro::advance() 10 2.989 2.994 2.996 93.55% Castro::subcycle_advance_ctu() 10 2.921 2.925 2.935 91.66% Castro::do_advance_ctu() 10 2.921 2.925 2.935 91.66% Castro::construct_ctu_hydro_source() 10 2.189 2.191 2.196 68.59% Gravity::make_radial_gravity() 21 0.3016 0.3068 0.3218 10.05% AmrLevel::FillPatch() 41 0.1944 0.2028 0.2131 6.65% Gravity::get_new_grav_vector() 11 0.2065 0.2082 0.2093 6.54% Castro::construct_old_gravity() 10 0.1795 0.1836 0.1949 6.09% Gravity::get_old_grav_vector() 10 0.1787 0.1829 0.1943 6.07% FillPatchIterator::Initialize 41 0.1611 0.1698 0.1901 5.94% Castro::construct_new_gravity() 10 0.1852 0.1864 0.1874 5.85% check_for_negative_density() 10 0.05701 0.1226 0.1785 5.57% Castro::initialize_do_advance() 10 0.1667 0.1681 0.1706 5.33% Amr::init() 1 0.1673 0.168 0.1683 5.26% Amr::initialInit() 1 0.1536 0.1542 0.1546 4.83% FillPatchIterator::FillFromLevel0() 41 0.1066 0.1166 0.1454 4.54% FillPatchSingleLevel 41 0.1064 0.1165 0.1453 4.54% Amr::InitializeInit() 1 0.05782 0.08978 0.1282 4.00% Amr::defBaseLevel() 1 0.05782 0.08977 0.1282 4.00% Castro::expand_state() 10 0.1085 0.112 0.1188 3.71% FabArray::ParallelCopy() 41 0.07081 0.08354 0.1149 3.59% Castro::initData() 1 0.04062 0.07312 0.1108 3.46% Castro::clean_state() 62 0.1019 0.104 0.1075 3.36% Castro::estTimeStep() 21 0.03481 0.07084 0.1054 3.29% Amr::FinalizeInit() 1 0.02564 0.06441 0.09586 2.99% Castro::do_old_sources() 10 0.08898 0.09306 0.09548 2.98% FabArray::ParallelCopy_finish() 41 0.03365 0.04828 0.08923 2.79% amrex::Copy() 193 0.05996 0.08104 0.08776 2.74% Castro::computeInitialDt() 2 0.002415 0.04127 0.07256 2.27% FabArray::setVal() 143 0.05526 0.06616 0.07208 2.25% Castro::initialize_advance() 10 0.05302 0.06567 0.06902 2.16% Castro::do_new_sources() 10 0.05752 0.06155 0.06833 2.13% Castro::computeTemp() 63 0.06108 0.06369 0.06623 2.07% Castro::reset_internal_energy(MultiFab) 63 0.04331 0.04535 0.04725 1.48% Castro::reset_internal_energy(Fab) 1008 0.04305 0.0451 0.04699 1.47% FabArray::ParallelCopy_nowait() 41 0.02561 0.03518 0.03868 1.21% StateDataPhysBCFunct::() 41 0.03035 0.03289 0.03555 1.11% StateData::FillBoundary(geom) 41 0.03026 0.03279 0.03543 1.11% Castro::normalize_species() 62 0.0339 0.03453 0.03522 1.10% Castro::construct_new_source() 50 0.02728 0.02946 0.03198 1.00% Castro::finalize_do_advance() 10 0.01941 0.02516 0.02967 0.93% Gravity::interpolate_monopole_grav() 21 0.02485 0.02526 0.02554 0.80% Castro::construct_new_gravity_source() 10 0.02178 0.02334 0.02552 0.80% Castro::post_init() 1 0.02259 0.02295 0.0231 0.72% Amr::writePlotFile() 2 0.02043 0.02059 0.02105 0.66% Castro::post_timestep() 10 0.01386 0.01419 0.01444 0.45% Castro::apply_source_to_state() 20 0.01064 0.01271 0.01363 0.43% FabArray::Saxpy() 20 0.0106 0.01266 0.01358 0.42% FabArray::setDomainBndry() 41 0.007897 0.01034 0.01216 0.38% Castro::Castro() 1 0.009887 0.0105 0.01132 0.35% Castro::check_for_nan() 20 0.009593 0.01022 0.01107 0.35% MultiFab::contains_nan() 20 0.00957 0.0102 0.01105 0.35% Castro::construct_old_source() 50 0.00697 0.009774 0.01069 0.33% Castro::construct_old_gravity_source() 10 0.006914 0.0097 0.01061 0.33% VisMF::Write(FabArray) 2 0.006876 0.008141 0.01054 0.33% Castro::computeNewDt() 9 0.01024 0.01027 0.01031 0.32% Castro::initMFs() 1 0.006148 0.00684 0.007942 0.25% Castro::enforce_min_density() 62 0.006176 0.006516 0.006895 0.22% Other 203 0.01905 0.02297 0.02616 0.82% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8646 KiB 8657 KiB 8661 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6745 KiB 6751 KiB 6755 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7121 KiB 7129 KiB 7130 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4543 KiB 4547 KiB 4568 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 226 KiB 236 KiB 250 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 13 KiB 15 KiB 19 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2791 KiB 2799 KiB 2801 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 239 KiB 244 KiB 256 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 32 KiB 38 KiB 54 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2024 KiB 2026 KiB 2027 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 82 KiB 83 KiB 83 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 71 KiB 73 KiB 77 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.05-41-gba3cb0c68650) finalized