Initializing AMReX (26.05-49-g939c28a6ef7c)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.05-49-g939c28a6ef7c) initialized Starting run at 05:35:54 UTC on 2026-05-18. Successfully read inputs file ... Castro git describe: 26.05-3-g308427cb3 AMReX git describe: 26.05-49-g939c28a6e Microphysics git describe: 26.05-1-g106dcbb2 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013965195 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.32184347 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.323658975 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.318105189 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.321088477 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.356019988 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.281604103 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.27713475 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.276297332 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.276141836 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.275271597 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007716887 seconds Ending run at 05:35:57 UTC on 2026-05-18. Run time = 3.202689877 Run time without initialization = 3.038420484 Average number of zones advanced per microsecond: 0.863 Average number of zones advanced per microsecond per rank: 0.108 TinyProfiler total time across processes [min...avg...max]: 3.1995 ... 3.2016 ... 3.2027 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 1.9694 2.0437 2.1177 66.12% Gravity::make_radial_gravity() 21 0.2803 0.2893 0.3043 9.50% check_for_negative_density() 10 0.05048 0.1279 0.2071 6.47% Castro::initData() 1 0.04887 0.07474 0.09911 3.09% FabArray::ParallelCopy_finish() 41 0.03641 0.04698 0.09413 2.94% amrex::Copy() 193 0.06207 0.07969 0.08879 2.77% Castro::estTimeStep() 21 0.02633 0.05433 0.07774 2.43% FabArray::setVal() 143 0.05361 0.06492 0.07245 2.26% Castro::reset_internal_energy(Fab) 1008 0.04455 0.04558 0.04724 1.48% FillPatchIterator::Initialize 41 0.03678 0.04441 0.04584 1.43% FabArray::ParallelCopy_nowait() 41 0.0255 0.03675 0.04057 1.27% StateData::FillBoundary(geom) 41 0.02947 0.03341 0.03746 1.17% Castro::normalize_species() 62 0.03371 0.0346 0.03574 1.12% Castro::initialize_do_advance() 10 0.01729 0.02465 0.02774 0.87% Gravity::interpolate_monopole_grav() 21 0.02486 0.02505 0.0253 0.79% Castro::construct_new_gravity_source() 10 0.02216 0.0232 0.02472 0.77% Castro::computeTemp() 63 0.01805 0.01856 0.01931 0.60% FabArray::Saxpy() 20 0.01062 0.01267 0.0138 0.43% Amr::writePlotFile() 2 0.008084 0.01139 0.01288 0.40% Castro::initialize_advance() 10 0.005954 0.009526 0.01231 0.38% VisMF::Write(FabArray) 2 0.008078 0.008804 0.01179 0.37% FabArray::setDomainBndry() 41 0.007946 0.01053 0.01164 0.36% MultiFab::contains_nan() 20 0.009654 0.0104 0.01149 0.36% Amr::coarseTimeStep() 10 0.005185 0.007159 0.01121 0.35% Castro::construct_old_gravity_source() 10 0.007153 0.009604 0.01047 0.33% Castro::initMFs() 1 0.006026 0.007333 0.01013 0.32% Castro::finalize_do_advance() 10 0.003593 0.00731 0.009319 0.29% StateData::define() 4 0.005097 0.006035 0.008024 0.25% Castro::construct_new_source() 50 0.005815 0.00611 0.006304 0.20% Gravity::get_new_grav_vector() 11 0.00282 0.003786 0.004218 0.13% Gravity::get_old_grav_vector() 10 0.001982 0.002544 0.00311 0.10% main() 1 0.001738 0.001965 0.002093 0.07% AmrLevel::FillPatch() 41 0.0008063 0.001006 0.001167 0.04% Amr::timeStep() 10 0.0001508 0.0001808 0.0003222 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002448 0.0002573 0.0002693 0.01% Castro::do_advance_ctu() 10 0.0001579 0.0001764 0.0002243 0.01% Castro::clean_state() 62 0.0001353 0.0001458 0.0001631 0.01% FillPatchIterator::FillFromLevel0() 41 0.0001004 0.0001203 0.0001359 0.00% StateDataPhysBCFunct::() 41 9.155e-05 0.0001078 0.0001305 0.00% Castro::do_old_sources() 10 7.823e-05 9.545e-05 0.0001162 0.00% FabArray::ParallelCopy() 41 7.858e-05 8.557e-05 9.119e-05 0.00% Castro::Castro() 1 5.331e-05 6.944e-05 8.894e-05 0.00% Castro::construct_old_source() 50 6.135e-05 7.717e-05 8.738e-05 0.00% Amr::FinalizeInit() 1 3.56e-06 1.39e-05 7.74e-05 0.00% FillPatchSingleLevel 41 6.571e-05 7.077e-05 7.622e-05 0.00% Castro::do_new_sources() 10 5.342e-05 6.455e-05 7.466e-05 0.00% Castro::subcycle_advance_ctu() 10 4.728e-05 5.706e-05 6.564e-05 0.00% Castro::apply_source_to_state() 20 4.482e-05 5.318e-05 5.942e-05 0.00% Castro::construct_old_gravity() 10 3.512e-05 4.352e-05 5.678e-05 0.00% Amr::defBaseLevel() 1 3.485e-05 4.291e-05 5.484e-05 0.00% Castro::construct_new_gravity() 10 3.131e-05 3.581e-05 4.871e-05 0.00% Castro::advance() 10 3.467e-05 4.035e-05 4.638e-05 0.00% Castro::check_for_nan() 20 2.278e-05 2.741e-05 3.28e-05 0.00% Castro::expand_state() 10 2.179e-05 2.387e-05 2.786e-05 0.00% Castro::post_timestep() 10 1.564e-05 1.787e-05 2.105e-05 0.00% AmrLevel::AmrLevel(dm) 1 6.722e-06 8.973e-06 1.328e-05 0.00% Castro::computeNewDt() 9 8.971e-06 1.011e-05 1.08e-05 0.00% Castro::post_init() 1 2.971e-06 5.004e-06 9.401e-06 0.00% Amr::InitializeInit() 1 2.447e-06 3.664e-06 8.366e-06 0.00% Castro::computeInitialDt() 2 5.847e-06 6.602e-06 8.098e-06 0.00% Amr::init() 1 1.83e-06 2.266e-06 2.895e-06 0.00% Amr::initialInit() 1 1.636e-06 1.938e-06 2.596e-06 0.00% Other 260 0.01126 0.01575 0.01922 0.60% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.199 3.202 3.203 100.00% Amr::coarseTimeStep() 10 3.028 3.028 3.028 94.54% Amr::timeStep() 10 3.005 3.009 3.011 94.02% Castro::advance() 10 2.991 2.995 2.997 93.56% Castro::subcycle_advance_ctu() 10 2.922 2.927 2.936 91.66% Castro::do_advance_ctu() 10 2.922 2.927 2.936 91.66% Castro::construct_ctu_hydro_source() 10 2.186 2.191 2.195 68.55% Gravity::make_radial_gravity() 21 0.2966 0.3069 0.3168 9.89% AmrLevel::FillPatch() 41 0.1912 0.2047 0.2216 6.92% check_for_negative_density() 10 0.05048 0.1279 0.2071 6.47% Gravity::get_new_grav_vector() 11 0.2039 0.2054 0.2066 6.45% FillPatchIterator::Initialize 41 0.1626 0.1726 0.1966 6.14% Castro::construct_old_gravity() 10 0.1796 0.1863 0.1932 6.03% Gravity::get_old_grav_vector() 10 0.1788 0.1856 0.1925 6.01% Castro::construct_new_gravity() 10 0.1808 0.1814 0.182 5.68% Castro::initialize_do_advance() 10 0.1661 0.1706 0.1751 5.47% Amr::init() 1 0.1602 0.1627 0.1639 5.12% FillPatchIterator::FillFromLevel0() 41 0.1079 0.1176 0.1519 4.74% FillPatchSingleLevel 41 0.1078 0.1175 0.1518 4.74% Amr::initialInit() 1 0.1461 0.1487 0.15 4.68% Castro::expand_state() 10 0.105 0.1121 0.1252 3.91% Amr::InitializeInit() 1 0.07432 0.09786 0.1217 3.80% Amr::defBaseLevel() 1 0.07432 0.09785 0.1217 3.80% FabArray::ParallelCopy() 41 0.07379 0.08392 0.1198 3.74% Castro::clean_state() 62 0.1027 0.1047 0.1072 3.35% Castro::initData() 1 0.05205 0.0783 0.1025 3.20% Castro::do_old_sources() 10 0.09128 0.09492 0.09855 3.08% FabArray::ParallelCopy_finish() 41 0.03641 0.04698 0.09413 2.94% amrex::Copy() 193 0.06207 0.07969 0.08879 2.77% Castro::estTimeStep() 21 0.02633 0.05433 0.07774 2.43% FabArray::setVal() 143 0.05361 0.06492 0.07245 2.26% Amr::FinalizeInit() 1 0.02793 0.05086 0.07218 2.25% Castro::initialize_advance() 10 0.05262 0.06492 0.06907 2.16% Castro::do_new_sources() 10 0.05689 0.0612 0.0673 2.10% Castro::computeTemp() 63 0.06315 0.0644 0.06682 2.09% Castro::reset_internal_energy(MultiFab) 63 0.04481 0.04584 0.0475 1.48% Castro::reset_internal_energy(Fab) 1008 0.04455 0.04558 0.04724 1.48% Castro::computeInitialDt() 2 0.00259 0.02553 0.04671 1.46% FabArray::ParallelCopy_nowait() 41 0.02562 0.03685 0.04067 1.27% StateDataPhysBCFunct::() 41 0.02957 0.03352 0.03757 1.17% StateData::FillBoundary(geom) 41 0.02947 0.03341 0.03746 1.17% Castro::normalize_species() 62 0.03371 0.0346 0.03574 1.12% Castro::construct_new_source() 50 0.02798 0.02931 0.03098 0.97% Castro::finalize_do_advance() 10 0.01823 0.02603 0.03016 0.94% Castro::post_init() 1 0.02478 0.02522 0.02547 0.80% Gravity::interpolate_monopole_grav() 21 0.02486 0.02505 0.0253 0.79% Castro::construct_new_gravity_source() 10 0.02216 0.0232 0.02472 0.77% Amr::writePlotFile() 2 0.02253 0.0228 0.02313 0.72% Castro::post_timestep() 10 0.01376 0.01412 0.01459 0.46% Castro::Castro() 1 0.009203 0.01089 0.01395 0.44% Castro::apply_source_to_state() 20 0.01067 0.01272 0.01385 0.43% FabArray::Saxpy() 20 0.01062 0.01267 0.0138 0.43% VisMF::Write(FabArray) 2 0.008078 0.008804 0.01179 0.37% FabArray::setDomainBndry() 41 0.007946 0.01053 0.01164 0.36% Castro::check_for_nan() 20 0.009677 0.01043 0.01152 0.36% MultiFab::contains_nan() 20 0.009654 0.0104 0.01149 0.36% Castro::construct_old_source() 50 0.007214 0.009681 0.01056 0.33% Castro::construct_old_gravity_source() 10 0.007153 0.009604 0.01047 0.33% Castro::initMFs() 1 0.006026 0.007333 0.01013 0.32% Castro::computeNewDt() 9 0.01008 0.01009 0.01011 0.32% AmrLevel::AmrLevel(dm) 1 0.005104 0.006044 0.008035 0.25% StateData::define() 4 0.005097 0.006035 0.008024 0.25% Other 260 0.01499 0.02271 0.02786 0.87% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 4 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8630 KiB 8648 KiB 8654 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6755 KiB 6761 KiB 6765 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7114 KiB 7123 KiB 7125 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4541 KiB 4547 KiB 4567 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 221 KiB 238 KiB 262 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 14 KiB 16 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2795 KiB 2799 KiB 2801 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 235 KiB 244 KiB 252 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 33 KiB 38 KiB 57 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2021 KiB 2024 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 81 KiB 82 KiB 82 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 71 KiB 74 KiB 77 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.05-49-g939c28a6ef7c) finalized