Initializing AMReX (26.05-51-gd6ac387a0802)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.05-51-gd6ac387a0802) initialized Starting run at 05:18:01 UTC on 2026-05-19. Successfully read inputs file ... Castro git describe: 26.05-3-g308427cb3 AMReX git describe: 26.05-51-gd6ac387a0 Microphysics git describe: 26.05-1-g106dcbb2 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014734328 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.330983569 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.322966433 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.323204921 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.322350203 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.366194517 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.281534439 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.279834863 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.279459827 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.280863445 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.279226141 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.006830916 seconds Ending run at 05:18:04 UTC on 2026-05-19. Run time = 3.261950799 Run time without initialization = 3.075983148 Average number of zones advanced per microsecond: 0.852 Average number of zones advanced per microsecond per rank: 0.107 TinyProfiler total time across processes [min...avg...max]: 3.2608 ... 3.2615 ... 3.2620 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 1.9962 2.0463 2.0977 64.31% Gravity::make_radial_gravity() 21 0.2908 0.3029 0.3133 9.60% check_for_negative_density() 10 0.07624 0.1286 0.1809 5.55% Castro::estTimeStep() 21 0.02717 0.07807 0.1204 3.69% Castro::initData() 1 0.03442 0.07291 0.1193 3.66% amrex::Copy() 193 0.07676 0.08824 0.09967 3.06% FabArray::ParallelCopy_finish() 41 0.03695 0.05615 0.08713 2.67% FabArray::setVal() 143 0.06376 0.06939 0.07492 2.30% Castro::reset_internal_energy(Fab) 1008 0.04487 0.0471 0.05388 1.65% FillPatchIterator::Initialize 41 0.04012 0.0455 0.05019 1.54% FabArray::ParallelCopy_nowait() 41 0.03107 0.03756 0.04144 1.27% Castro::normalize_species() 62 0.03369 0.03504 0.03628 1.11% StateData::FillBoundary(geom) 41 0.03135 0.03356 0.03611 1.11% Gravity::interpolate_monopole_grav() 21 0.02528 0.02594 0.02755 0.84% Castro::initialize_do_advance() 10 0.01721 0.0232 0.02593 0.79% Castro::construct_new_gravity_source() 10 0.02191 0.02319 0.02457 0.75% Castro::computeTemp() 63 0.01823 0.01906 0.02139 0.66% FabArray::Saxpy() 20 0.01162 0.01287 0.01389 0.43% MultiFab::contains_nan() 20 0.009487 0.0106 0.0131 0.40% Castro::initialize_advance() 10 0.009176 0.01078 0.01306 0.40% FabArray::setDomainBndry() 41 0.008794 0.01069 0.01165 0.36% VisMF::Write(FabArray) 2 0.00818 0.00877 0.01143 0.35% Amr::writePlotFile() 2 0.00716 0.01013 0.01084 0.33% Castro::construct_old_gravity_source() 10 0.007901 0.009394 0.009993 0.31% Amr::coarseTimeStep() 10 0.003477 0.005205 0.009685 0.30% Castro::finalize_do_advance() 10 0.001599 0.00607 0.007724 0.24% Castro::initMFs() 1 0.006173 0.006747 0.00747 0.23% Castro::enforce_min_density() 62 0.006211 0.006479 0.007032 0.22% Castro::construct_new_source() 50 0.006301 0.006392 0.006496 0.20% Gravity::get_old_grav_vector() 10 0.001938 0.002929 0.004431 0.14% Gravity::get_new_grav_vector() 11 0.003537 0.003874 0.00413 0.13% main() 1 0.001854 0.00193 0.002051 0.06% AmrLevel::FillPatch() 41 0.0009943 0.00106 0.001146 0.04% Amr::timeStep() 10 0.0001406 0.0001865 0.0003736 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002524 0.00027 0.0003417 0.01% Castro::do_advance_ctu() 10 0.0001374 0.0001659 0.0001958 0.01% Castro::clean_state() 62 0.0001327 0.0001444 0.000164 0.01% FillPatchIterator::FillFromLevel0() 41 0.0001029 0.0001151 0.0001405 0.00% StateDataPhysBCFunct::() 41 9.698e-05 0.000106 0.0001151 0.00% Castro::do_old_sources() 10 7.397e-05 9.401e-05 0.0001026 0.00% Castro::Castro() 1 6.2e-05 7.574e-05 9.03e-05 0.00% FabArray::ParallelCopy() 41 7.321e-05 7.987e-05 8.503e-05 0.00% Castro::construct_old_source() 50 5.719e-05 7.375e-05 8.499e-05 0.00% FillPatchSingleLevel 41 6.644e-05 7.144e-05 8.421e-05 0.00% Amr::FinalizeInit() 1 4.503e-06 1.345e-05 7.383e-05 0.00% Castro::do_new_sources() 10 4.982e-05 6.182e-05 7.22e-05 0.00% Castro::subcycle_advance_ctu() 10 4.254e-05 5.386e-05 6.134e-05 0.00% Castro::construct_old_gravity() 10 3.692e-05 4.419e-05 6e-05 0.00% Castro::advance() 10 3.891e-05 4.212e-05 5.703e-05 0.00% Castro::apply_source_to_state() 20 4.385e-05 4.914e-05 5.568e-05 0.00% Amr::defBaseLevel() 1 3.919e-05 4.508e-05 5.329e-05 0.00% Castro::check_for_nan() 20 2.306e-05 2.771e-05 4.954e-05 0.00% Castro::construct_new_gravity() 10 2.84e-05 3.337e-05 4.485e-05 0.00% Castro::expand_state() 10 2.076e-05 2.373e-05 3.444e-05 0.00% Castro::post_timestep() 10 1.291e-05 1.632e-05 1.869e-05 0.00% Castro::computeNewDt() 9 9.111e-06 1.01e-05 1.059e-05 0.00% Castro::computeInitialDt() 2 6.239e-06 6.642e-06 7.613e-06 0.00% Amr::InitializeInit() 1 2.342e-06 3.496e-06 6.238e-06 0.00% Castro::post_init() 1 2.58e-06 3.061e-06 3.444e-06 0.00% Amr::init() 1 1.997e-06 2.311e-06 2.792e-06 0.00% Amr::initialInit() 1 1.518e-06 1.855e-06 2.157e-06 0.00% Other 203 0.0107 0.01308 0.01512 0.46% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.261 3.261 3.262 100.00% Amr::coarseTimeStep() 10 3.067 3.067 3.067 94.03% Amr::timeStep() 10 3.046 3.051 3.052 93.57% Castro::advance() 10 3.031 3.036 3.038 93.13% Castro::subcycle_advance_ctu() 10 2.96 2.965 2.969 91.01% Castro::do_advance_ctu() 10 2.96 2.965 2.969 91.00% Castro::construct_ctu_hydro_source() 10 2.191 2.194 2.197 67.34% Gravity::make_radial_gravity() 21 0.3099 0.3223 0.3306 10.14% AmrLevel::FillPatch() 41 0.2049 0.2185 0.2277 6.98% Castro::construct_old_gravity() 10 0.1966 0.2064 0.2137 6.55% Gravity::get_old_grav_vector() 10 0.1955 0.2057 0.213 6.53% Gravity::get_new_grav_vector() 11 0.206 0.2072 0.2081 6.38% FillPatchIterator::Initialize 41 0.1684 0.1839 0.1992 6.11% Amr::init() 1 0.1845 0.1851 0.1856 5.69% Castro::initialize_do_advance() 10 0.1687 0.1735 0.1829 5.61% Castro::construct_new_gravity() 10 0.1818 0.1823 0.1828 5.60% check_for_negative_density() 10 0.07624 0.1286 0.1809 5.55% Amr::initialInit() 1 0.1694 0.1702 0.1708 5.24% FillPatchIterator::FillFromLevel0() 41 0.1074 0.1277 0.15 4.60% FillPatchSingleLevel 41 0.1073 0.1276 0.1499 4.60% Amr::InitializeInit() 1 0.05445 0.09341 0.1407 4.31% Amr::defBaseLevel() 1 0.05445 0.09341 0.1407 4.31% Castro::initData() 1 0.03832 0.07663 0.1233 3.78% Castro::estTimeStep() 21 0.02717 0.07807 0.1204 3.69% Castro::expand_state() 10 0.1101 0.1144 0.1191 3.65% FabArray::ParallelCopy() 41 0.07298 0.0939 0.1184 3.63% Castro::clean_state() 62 0.1036 0.1072 0.1173 3.60% Amr::FinalizeInit() 1 0.0293 0.07678 0.1161 3.56% Castro::do_old_sources() 10 0.0978 0.1036 0.1083 3.32% amrex::Copy() 193 0.07676 0.08824 0.09967 3.06% Castro::computeInitialDt() 2 0.002865 0.05053 0.08998 2.76% FabArray::ParallelCopy_finish() 41 0.03695 0.05615 0.08713 2.67% Castro::computeTemp() 63 0.06377 0.06643 0.07561 2.32% FabArray::setVal() 143 0.06376 0.06939 0.07492 2.30% Castro::initialize_advance() 10 0.0622 0.06839 0.07103 2.18% Castro::do_new_sources() 10 0.0595 0.06247 0.06568 2.01% Castro::reset_internal_energy(MultiFab) 63 0.04513 0.04737 0.05422 1.66% Castro::reset_internal_energy(Fab) 1008 0.04487 0.0471 0.05388 1.65% FabArray::ParallelCopy_nowait() 41 0.03119 0.03767 0.04155 1.27% Castro::normalize_species() 62 0.03369 0.03504 0.03628 1.11% StateDataPhysBCFunct::() 41 0.03144 0.03366 0.03622 1.11% StateData::FillBoundary(geom) 41 0.03135 0.03356 0.03611 1.11% Castro::construct_new_source() 50 0.02823 0.02958 0.03102 0.95% Castro::finalize_do_advance() 10 0.01694 0.0236 0.02847 0.87% Gravity::interpolate_monopole_grav() 21 0.02528 0.02594 0.02755 0.84% Castro::post_init() 1 0.02601 0.02613 0.02641 0.81% Castro::construct_new_gravity_source() 10 0.02191 0.02319 0.02457 0.75% Amr::writePlotFile() 2 0.02166 0.02185 0.02196 0.67% Castro::post_timestep() 10 0.01404 0.01429 0.0146 0.45% Castro::apply_source_to_state() 20 0.01166 0.01292 0.01394 0.43% FabArray::Saxpy() 20 0.01162 0.01287 0.01389 0.43% Castro::check_for_nan() 20 0.00951 0.01063 0.01315 0.40% MultiFab::contains_nan() 20 0.009487 0.0106 0.0131 0.40% FabArray::setDomainBndry() 41 0.008794 0.01069 0.01165 0.36% VisMF::Write(FabArray) 2 0.00818 0.00877 0.01143 0.35% Castro::Castro() 1 0.009584 0.01052 0.01139 0.35% Castro::construct_old_source() 50 0.007958 0.009468 0.01007 0.31% Castro::computeNewDt() 9 0.009999 0.01002 0.01003 0.31% Castro::construct_old_gravity_source() 10 0.007901 0.009394 0.009993 0.31% Castro::initMFs() 1 0.006173 0.006747 0.00747 0.23% Castro::enforce_min_density() 62 0.006211 0.006479 0.007032 0.22% Other 203 0.01983 0.02378 0.02712 0.83% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 13 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 3 B 6 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 13 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8646 KiB 8658 KiB 8661 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6713 KiB 6719 KiB 6721 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7121 KiB 7129 KiB 7131 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4518 KiB 4524 KiB 4534 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 231 KiB 245 KiB 257 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 15 KiB 16 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2779 KiB 2786 KiB 2788 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 241 KiB 251 KiB 258 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 32 KiB 41 KiB 52 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2024 KiB 2026 KiB 2027 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 80 KiB 81 KiB 81 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 76 KiB 80 KiB 83 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.05-51-gd6ac387a0802) finalized