Initializing AMReX (26.05-55-g750b74d10a21)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.05-55-g750b74d10a21) initialized Starting run at 05:17:47 UTC on 2026-05-22. Successfully read inputs file ... Castro git describe: 26.05-3-g308427cb3 AMReX git describe: 26.05-55-g750b74d10 Microphysics git describe: 26.05-1-g106dcbb2 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014099114 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.321311665 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.319883015 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.319573186 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.32125641 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.366829069 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.284027693 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.273692479 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.27464183 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.273321576 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.273393623 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007766854 seconds Ending run at 05:17:50 UTC on 2026-05-22. Run time = 3.205338971 Run time without initialization = 3.038169301 Average number of zones advanced per microsecond: 0.863 Average number of zones advanced per microsecond per rank: 0.108 TinyProfiler total time across processes [min...avg...max]: 3.2032 ... 3.2046 ... 3.2054 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0004 2.0455 2.1154 66.00% Gravity::make_radial_gravity() 21 0.2777 0.2834 0.2932 9.15% check_for_negative_density() 10 0.03186 0.1061 0.1513 4.72% Castro::initData() 1 0.03397 0.06939 0.1034 3.22% Castro::estTimeStep() 21 0.02759 0.06425 0.1031 3.22% FabArray::ParallelCopy_finish() 41 0.04075 0.06567 0.09791 3.05% amrex::Copy() 193 0.07672 0.08266 0.08976 2.80% FabArray::setVal() 143 0.06317 0.06702 0.07175 2.24% FillPatchIterator::Initialize 41 0.03838 0.04528 0.05011 1.56% Castro::reset_internal_energy(Fab) 1008 0.04444 0.04568 0.04704 1.47% FabArray::ParallelCopy_nowait() 41 0.03322 0.03643 0.03856 1.20% StateData::FillBoundary(geom) 41 0.0319 0.03342 0.03566 1.11% Castro::normalize_species() 62 0.03408 0.03458 0.03558 1.11% Castro::initialize_do_advance() 10 0.01615 0.02463 0.03398 1.06% Gravity::interpolate_monopole_grav() 21 0.02454 0.02485 0.0252 0.79% Castro::construct_new_gravity_source() 10 0.02212 0.02364 0.02503 0.78% Castro::construct_old_gravity_source() 10 0.008696 0.01199 0.02385 0.74% Castro::computeTemp() 63 0.01815 0.01861 0.01913 0.60% FabArray::Saxpy() 20 0.01239 0.01349 0.01441 0.45% Castro::initialize_advance() 10 0.00644 0.01049 0.01293 0.40% VisMF::Write(FabArray) 2 0.007987 0.008777 0.01223 0.38% FabArray::setDomainBndry() 41 0.009094 0.01099 0.01219 0.38% Amr::writePlotFile() 2 0.006953 0.01068 0.01165 0.36% MultiFab::contains_nan() 20 0.009441 0.01056 0.01143 0.36% Amr::coarseTimeStep() 10 0.002637 0.005952 0.0108 0.34% Castro::finalize_do_advance() 10 0.001214 0.006263 0.01017 0.32% Castro::initMFs() 1 0.006286 0.006876 0.007724 0.24% Castro::enforce_min_density() 62 0.006028 0.006403 0.006773 0.21% Castro::construct_new_source() 50 0.006164 0.006405 0.006637 0.21% Gravity::get_new_grav_vector() 11 0.00333 0.003818 0.0042 0.13% Gravity::get_old_grav_vector() 10 0.002004 0.002579 0.002954 0.09% main() 1 0.001665 0.001863 0.002075 0.06% AmrLevel::FillPatch() 41 0.001072 0.001144 0.001218 0.04% Amr::timeStep() 10 0.0001314 0.0001789 0.0003789 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002485 0.0002579 0.0002745 0.01% Castro::do_advance_ctu() 10 0.0001554 0.0001701 0.0001911 0.01% Castro::clean_state() 62 0.000129 0.0001482 0.0001622 0.01% Castro::construct_old_source() 50 7.278e-05 9.161e-05 0.0001449 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001079 0.0001164 0.0001271 0.00% Castro::do_old_sources() 10 8.086e-05 9.753e-05 0.0001168 0.00% Castro::Castro() 1 5.813e-05 7.949e-05 0.0001153 0.00% StateDataPhysBCFunct::() 41 9.559e-05 0.0001035 0.0001105 0.00% FabArray::ParallelCopy() 41 7.523e-05 8.522e-05 9.704e-05 0.00% Amr::FinalizeInit() 1 4.014e-06 1.514e-05 8.889e-05 0.00% Castro::do_new_sources() 10 5.3e-05 6.576e-05 7.729e-05 0.00% FillPatchSingleLevel 41 6.49e-05 6.972e-05 7.203e-05 0.00% Castro::apply_source_to_state() 20 4.59e-05 5.402e-05 6.472e-05 0.00% Castro::subcycle_advance_ctu() 10 4.509e-05 5.422e-05 6.309e-05 0.00% Castro::advance() 10 3.5e-05 4.485e-05 6.066e-05 0.00% Castro::construct_old_gravity() 10 3.599e-05 4.244e-05 4.84e-05 0.00% Castro::construct_new_gravity() 10 2.964e-05 3.572e-05 4.526e-05 0.00% Amr::defBaseLevel() 1 3.522e-05 3.955e-05 4.404e-05 0.00% Castro::expand_state() 10 1.813e-05 2.343e-05 2.931e-05 0.00% Castro::check_for_nan() 20 2.34e-05 2.604e-05 2.901e-05 0.00% Castro::post_timestep() 10 1.379e-05 1.662e-05 1.829e-05 0.00% Castro::computeNewDt() 9 8.939e-06 1.052e-05 1.242e-05 0.00% Castro::post_init() 1 2.362e-06 5.437e-06 1.204e-05 0.00% Castro::computeInitialDt() 2 5.639e-06 6.893e-06 8.602e-06 0.00% Amr::InitializeInit() 1 2.359e-06 3.451e-06 5.956e-06 0.00% Amr::init() 1 1.833e-06 2.289e-06 3.232e-06 0.00% Amr::initialInit() 1 1.645e-06 2.138e-06 2.978e-06 0.00% Other 203 0.01046 0.01342 0.0153 0.48% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.203 3.205 3.205 100.00% Amr::coarseTimeStep() 10 3.028 3.028 3.028 94.48% Amr::timeStep() 10 3.006 3.011 3.015 94.05% Castro::advance() 10 2.992 2.997 3.001 93.62% Castro::subcycle_advance_ctu() 10 2.925 2.929 2.936 91.58% Castro::do_advance_ctu() 10 2.925 2.928 2.935 91.58% Castro::construct_ctu_hydro_source() 10 2.167 2.171 2.173 67.80% Gravity::make_radial_gravity() 21 0.2963 0.302 0.3116 9.72% AmrLevel::FillPatch() 41 0.2095 0.2258 0.2431 7.58% FillPatchIterator::Initialize 41 0.1733 0.1923 0.2129 6.64% Gravity::get_new_grav_vector() 11 0.2036 0.2047 0.2061 6.43% Castro::construct_old_gravity() 10 0.1782 0.1837 0.1909 5.96% Gravity::get_old_grav_vector() 10 0.1774 0.1829 0.1903 5.94% Castro::construct_new_gravity() 10 0.1818 0.1823 0.1833 5.72% Castro::initialize_do_advance() 10 0.1682 0.1741 0.1826 5.70% Amr::init() 1 0.1649 0.1662 0.1667 5.20% FillPatchIterator::FillFromLevel0() 41 0.1138 0.136 0.1655 5.16% FillPatchSingleLevel 41 0.1137 0.1359 0.1653 5.16% Amr::initialInit() 1 0.1505 0.1518 0.1524 4.75% check_for_negative_density() 10 0.03186 0.1061 0.1513 4.72% FabArray::ParallelCopy() 41 0.07935 0.1023 0.1313 4.10% Castro::expand_state() 10 0.1055 0.1152 0.1304 4.07% Amr::InitializeInit() 1 0.0551 0.09052 0.1248 3.89% Amr::defBaseLevel() 1 0.05509 0.09052 0.1248 3.89% Castro::do_old_sources() 10 0.1121 0.1152 0.117 3.65% Castro::clean_state() 62 0.1029 0.1048 0.1076 3.36% Castro::initData() 1 0.03787 0.07299 0.1066 3.33% Castro::estTimeStep() 21 0.02759 0.06425 0.1031 3.22% FabArray::ParallelCopy_finish() 41 0.04075 0.06567 0.09791 3.05% Amr::FinalizeInit() 1 0.02639 0.06128 0.09723 3.03% amrex::Copy() 193 0.07672 0.08266 0.08976 2.80% Castro::computeInitialDt() 2 0.002462 0.03739 0.07338 2.29% FabArray::setVal() 143 0.06317 0.06702 0.07175 2.24% Castro::initialize_advance() 10 0.05618 0.06586 0.07007 2.19% Castro::do_new_sources() 10 0.05979 0.06326 0.06722 2.10% Castro::computeTemp() 63 0.06284 0.06454 0.06618 2.06% Castro::reset_internal_energy(MultiFab) 63 0.04469 0.04593 0.04732 1.48% Castro::reset_internal_energy(Fab) 1008 0.04444 0.04568 0.04704 1.47% FabArray::ParallelCopy_nowait() 41 0.03333 0.03653 0.03866 1.21% StateDataPhysBCFunct::() 41 0.03201 0.03353 0.03576 1.12% StateData::FillBoundary(geom) 41 0.0319 0.03342 0.03566 1.11% Castro::normalize_species() 62 0.03408 0.03458 0.03558 1.11% Castro::construct_new_source() 50 0.02852 0.03004 0.03158 0.99% Castro::finalize_do_advance() 10 0.01674 0.02332 0.02962 0.92% Gravity::interpolate_monopole_grav() 21 0.02454 0.02485 0.0252 0.79% Castro::construct_new_gravity_source() 10 0.02212 0.02364 0.02503 0.78% Castro::construct_old_source() 50 0.008774 0.01208 0.02399 0.75% Castro::construct_old_gravity_source() 10 0.008696 0.01199 0.02385 0.74% Castro::post_init() 1 0.02359 0.02373 0.02382 0.74% Amr::writePlotFile() 2 0.02211 0.02221 0.02235 0.70% Castro::apply_source_to_state() 20 0.01244 0.01355 0.01446 0.45% Castro::post_timestep() 10 0.01369 0.0142 0.01446 0.45% FabArray::Saxpy() 20 0.01239 0.01349 0.01441 0.45% VisMF::Write(FabArray) 2 0.007987 0.008777 0.01223 0.38% FabArray::setDomainBndry() 41 0.009094 0.01099 0.01219 0.38% Castro::Castro() 1 0.009714 0.01076 0.01162 0.36% Castro::check_for_nan() 20 0.009467 0.01059 0.01146 0.36% MultiFab::contains_nan() 20 0.009441 0.01056 0.01143 0.36% Castro::computeNewDt() 9 0.009813 0.009826 0.009833 0.31% Castro::initMFs() 1 0.006286 0.006876 0.007724 0.24% Castro::enforce_min_density() 62 0.006028 0.006403 0.006773 0.21% Other 203 0.01909 0.02411 0.02747 0.86% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 4 B 6 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8646 KiB 8655 KiB 8658 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6748 KiB 6754 KiB 6755 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7119 KiB 7127 KiB 7129 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4541 KiB 4547 KiB 4563 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 242 KiB 259 KiB 284 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 15 KiB 17 KiB 21 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2791 KiB 2799 KiB 2803 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 235 KiB 239 KiB 247 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 36 KiB 45 KiB 62 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2024 KiB 2026 KiB 2026 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 81 KiB 81 KiB 82 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 70 KiB 73 KiB 76 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.05-55-g750b74d10a21) finalized