Initializing AMReX (26.05-63-gc2eb6db7ee79)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.05-63-gc2eb6db7ee79) initialized Starting run at 05:19:31 UTC on 2026-06-01. Successfully read inputs file ... Castro git describe: 26.05-3-g308427cb3 AMReX git describe: 26.05-63-gc2eb6db7e Microphysics git describe: 26.05-10-g6abd2216 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013399277 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.327032968 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.321369033 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.318529003 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.320935056 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.353819403 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.286159668 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.279004708 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.27754148 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.276035312 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.273967307 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.006714787 seconds Ending run at 05:19:34 UTC on 2026-06-01. Run time = 3.211274209 Run time without initialization = 3.043658217 Average number of zones advanced per microsecond: 0.861 Average number of zones advanced per microsecond per rank: 0.108 TinyProfiler total time across processes [min...avg...max]: 3.2079 ... 3.2100 ... 3.2114 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 1.9760 2.0508 2.1321 66.39% Gravity::make_radial_gravity() 21 0.2811 0.2891 0.3071 9.56% check_for_negative_density() 10 0.04411 0.1287 0.2065 6.43% Castro::estTimeStep() 21 0.03149 0.06467 0.1052 3.28% Castro::initData() 1 0.03489 0.07135 0.1029 3.20% FabArray::ParallelCopy_finish() 41 0.03416 0.04902 0.09413 2.93% amrex::Copy() 193 0.06217 0.0815 0.08971 2.79% FabArray::setVal() 143 0.05329 0.06529 0.0703 2.19% Castro::reset_internal_energy(Fab) 1008 0.04433 0.04583 0.04698 1.46% FillPatchIterator::Initialize 41 0.03707 0.04358 0.04659 1.45% FabArray::ParallelCopy_nowait() 41 0.02635 0.0358 0.03861 1.20% StateData::FillBoundary(geom) 41 0.03131 0.03309 0.03583 1.12% Castro::normalize_species() 62 0.03398 0.03457 0.0353 1.10% Castro::initialize_do_advance() 10 0.01692 0.02321 0.02604 0.81% Gravity::interpolate_monopole_grav() 21 0.02481 0.02526 0.02562 0.80% Castro::construct_new_gravity_source() 10 0.02115 0.02311 0.02489 0.78% Castro::computeTemp() 63 0.01809 0.01865 0.01961 0.61% FabArray::Saxpy() 20 0.01064 0.01261 0.01365 0.43% Castro::initialize_advance() 10 0.006082 0.00979 0.01265 0.39% FabArray::setDomainBndry() 41 0.008018 0.01065 0.01236 0.38% Amr::writePlotFile() 2 0.006849 0.009579 0.01189 0.37% MultiFab::contains_nan() 20 0.009385 0.01018 0.01136 0.35% Castro::construct_old_gravity_source() 10 0.006971 0.009644 0.01049 0.33% VisMF::Write(FabArray) 2 0.007043 0.008152 0.01047 0.33% Amr::coarseTimeStep() 10 0.002593 0.004574 0.009203 0.29% Castro::initMFs() 1 0.006324 0.006991 0.008317 0.26% Castro::finalize_do_advance() 10 0.001066 0.005693 0.007507 0.23% Castro::enforce_min_density() 62 0.00616 0.006468 0.006868 0.21% Castro::construct_new_source() 50 0.005531 0.006041 0.006272 0.20% Gravity::get_new_grav_vector() 11 0.002785 0.003812 0.004188 0.13% Gravity::get_old_grav_vector() 10 0.001703 0.002749 0.003691 0.11% main() 1 0.001837 0.001996 0.002155 0.07% AmrLevel::FillPatch() 41 0.0008908 0.001157 0.001253 0.04% Amr::timeStep() 10 0.0001453 0.000185 0.000365 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002436 0.0002576 0.0002757 0.01% Castro::do_advance_ctu() 10 0.0001436 0.0001646 0.0001861 0.01% Castro::clean_state() 62 0.0001249 0.0001457 0.000171 0.01% FillPatchIterator::FillFromLevel0() 41 0.0001094 0.0001181 0.0001329 0.00% StateDataPhysBCFunct::() 41 9.039e-05 0.0001011 0.0001138 0.00% Castro::do_old_sources() 10 7.838e-05 9.57e-05 0.0001107 0.00% Castro::construct_old_source() 50 6.955e-05 8.204e-05 0.0001081 0.00% FabArray::ParallelCopy() 41 7.562e-05 8.425e-05 9.631e-05 0.00% Castro::Castro() 1 5.203e-05 6.923e-05 8.778e-05 0.00% FillPatchSingleLevel 41 6.661e-05 7.043e-05 7.774e-05 0.00% Amr::FinalizeInit() 1 3.486e-06 1.338e-05 7.672e-05 0.00% Castro::do_new_sources() 10 5.124e-05 6.114e-05 7.05e-05 0.00% Castro::subcycle_advance_ctu() 10 4.289e-05 5.435e-05 6.69e-05 0.00% Castro::apply_source_to_state() 20 4.56e-05 5.115e-05 5.878e-05 0.00% Castro::construct_old_gravity() 10 3.617e-05 4.306e-05 4.975e-05 0.00% Castro::advance() 10 3.858e-05 4.275e-05 4.96e-05 0.00% Castro::construct_new_gravity() 10 2.982e-05 3.481e-05 4.713e-05 0.00% Amr::defBaseLevel() 1 3.247e-05 3.87e-05 4.661e-05 0.00% Castro::expand_state() 10 1.964e-05 2.427e-05 2.844e-05 0.00% Castro::check_for_nan() 20 2.081e-05 2.464e-05 2.7e-05 0.00% Castro::post_timestep() 10 1.522e-05 1.669e-05 1.819e-05 0.00% Castro::computeNewDt() 9 9.52e-06 1.009e-05 1.062e-05 0.00% AmrLevel::AmrLevel(dm) 1 6.46e-06 7.728e-06 1.013e-05 0.00% Castro::computeInitialDt() 2 5.621e-06 6.507e-06 7.881e-06 0.00% Amr::InitializeInit() 1 2.481e-06 3.284e-06 5.383e-06 0.00% Castro::post_init() 1 2.245e-06 3.282e-06 4.636e-06 0.00% Amr::init() 1 1.738e-06 2.321e-06 3.088e-06 0.00% Amr::initialInit() 1 1.365e-06 1.706e-06 1.951e-06 0.00% Other 202 0.01036 0.01448 0.018 0.56% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.208 3.21 3.211 100.00% Amr::coarseTimeStep() 10 3.035 3.035 3.035 94.51% Amr::timeStep() 10 3.014 3.019 3.021 94.06% Castro::advance() 10 3 3.004 3.006 93.62% Castro::subcycle_advance_ctu() 10 2.932 2.936 2.946 91.73% Castro::do_advance_ctu() 10 2.932 2.936 2.946 91.73% Castro::construct_ctu_hydro_source() 10 2.194 2.199 2.202 68.57% Gravity::make_radial_gravity() 21 0.2986 0.3071 0.3202 9.97% AmrLevel::FillPatch() 41 0.1935 0.2063 0.2225 6.93% Gravity::get_new_grav_vector() 11 0.205 0.2058 0.207 6.45% check_for_negative_density() 10 0.04411 0.1287 0.2065 6.43% FillPatchIterator::Initialize 41 0.1625 0.1726 0.1978 6.16% Castro::construct_old_gravity() 10 0.1812 0.1862 0.1958 6.10% Gravity::get_old_grav_vector() 10 0.1804 0.1855 0.1952 6.08% Castro::construct_new_gravity() 10 0.1837 0.1841 0.1847 5.75% Castro::initialize_do_advance() 10 0.1663 0.1712 0.1743 5.43% Amr::init() 1 0.1637 0.1659 0.1672 5.21% Amr::initialInit() 1 0.1502 0.1523 0.1538 4.79% FillPatchIterator::FillFromLevel0() 41 0.1079 0.1184 0.1527 4.76% FillPatchSingleLevel 41 0.1078 0.1183 0.1526 4.75% Amr::InitializeInit() 1 0.05707 0.09343 0.1251 3.90% Amr::defBaseLevel() 1 0.05706 0.09343 0.1251 3.90% Castro::expand_state() 10 0.1081 0.114 0.1243 3.87% FabArray::ParallelCopy() 41 0.07213 0.085 0.1207 3.76% Castro::initData() 1 0.03858 0.07489 0.1065 3.32% Castro::clean_state() 62 0.1032 0.1051 0.1063 3.31% Castro::estTimeStep() 21 0.03149 0.06467 0.1052 3.28% Castro::do_old_sources() 10 0.08882 0.09462 0.09904 3.08% Amr::FinalizeInit() 1 0.02564 0.05891 0.09649 3.00% FabArray::ParallelCopy_finish() 41 0.03416 0.04902 0.09413 2.93% amrex::Copy() 193 0.06217 0.0815 0.08971 2.79% Castro::computeInitialDt() 2 0.002651 0.03598 0.0735 2.29% FabArray::setVal() 143 0.05329 0.06529 0.0703 2.19% Castro::initialize_advance() 10 0.0528 0.06545 0.06944 2.16% Castro::do_new_sources() 10 0.05533 0.06117 0.0666 2.07% Castro::computeTemp() 63 0.06267 0.06473 0.06593 2.05% Castro::reset_internal_energy(MultiFab) 63 0.04459 0.04609 0.04724 1.47% Castro::reset_internal_energy(Fab) 1008 0.04433 0.04583 0.04698 1.46% FabArray::ParallelCopy_nowait() 41 0.02647 0.0359 0.03871 1.21% StateDataPhysBCFunct::() 41 0.03141 0.03319 0.03593 1.12% StateData::FillBoundary(geom) 41 0.03131 0.03309 0.03583 1.12% Castro::normalize_species() 62 0.03398 0.03457 0.0353 1.10% Castro::construct_new_source() 50 0.02668 0.02916 0.03116 0.97% Castro::finalize_do_advance() 10 0.0199 0.0243 0.02773 0.86% Gravity::interpolate_monopole_grav() 21 0.02481 0.02526 0.02562 0.80% Castro::construct_new_gravity_source() 10 0.02115 0.02311 0.02489 0.78% Castro::post_init() 1 0.02252 0.02293 0.02307 0.72% Amr::writePlotFile() 2 0.02026 0.02042 0.02085 0.65% Castro::post_timestep() 10 0.01398 0.01428 0.01469 0.46% Castro::apply_source_to_state() 20 0.01069 0.01266 0.01371 0.43% FabArray::Saxpy() 20 0.01064 0.01261 0.01365 0.43% FabArray::setDomainBndry() 41 0.008018 0.01065 0.01236 0.38% Castro::Castro() 1 0.009744 0.01058 0.01152 0.36% Castro::check_for_nan() 20 0.009411 0.0102 0.01139 0.35% MultiFab::contains_nan() 20 0.009385 0.01018 0.01136 0.35% Castro::construct_old_source() 50 0.007041 0.009726 0.01058 0.33% Castro::construct_old_gravity_source() 10 0.006971 0.009644 0.01049 0.33% VisMF::Write(FabArray) 2 0.007043 0.008152 0.01047 0.33% Castro::computeNewDt() 9 0.01008 0.01009 0.01011 0.31% Castro::initMFs() 1 0.006324 0.006991 0.008317 0.26% Castro::enforce_min_density() 62 0.00616 0.006468 0.006868 0.21% AmrLevel::AmrLevel(dm) 1 0.00515 0.005649 0.006798 0.21% Other 202 0.01408 0.02104 0.02618 0.82% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8643 KiB 8652 KiB 8657 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6748 KiB 6756 KiB 6759 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7116 KiB 7125 KiB 7128 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4548 KiB 4553 KiB 4572 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 224 KiB 240 KiB 261 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 13 KiB 15 KiB 19 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2793 KiB 2801 KiB 2804 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 236 KiB 243 KiB 254 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 32 KiB 39 KiB 57 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2023 KiB 2025 KiB 2026 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 81 KiB 82 KiB 82 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 72 KiB 74 KiB 77 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.05-63-gc2eb6db7ee79) finalized