Initializing AMReX (26.06-5-g65db2e4e678a)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.06-5-g65db2e4e678a) initialized Starting run at 05:34:35 UTC on 2026-06-03. Successfully read inputs file ... Castro git describe: 26.06-1-g524fc2e04 AMReX git describe: 26.06-5-g65db2e4e6 Microphysics git describe: 26.06-4-g4bad0947 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013760703 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.328614577 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.327068056 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.323498997 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.320581373 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.35824835 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.284758718 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.277133863 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.277810196 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.27760079 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.277082267 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.006789053 seconds Ending run at 05:34:38 UTC on 2026-06-03. Run time = 3.234473737 Run time without initialization = 3.061895043 Average number of zones advanced per microsecond: 0.856 Average number of zones advanced per microsecond per rank: 0.107 TinyProfiler total time across processes [min...avg...max]: 3.2328 ... 3.2340 ... 3.2345 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 1.9930 2.0674 2.1553 66.63% Gravity::make_radial_gravity() 21 0.2815 0.2914 0.3072 9.50% check_for_negative_density() 10 0.02745 0.1157 0.1969 6.09% Castro::initData() 1 0.03461 0.0689 0.1103 3.41% Castro::estTimeStep() 21 0.03505 0.07366 0.1097 3.39% FabArray::ParallelCopy_finish() 41 0.05268 0.06552 0.08991 2.78% amrex::Copy() 193 0.06231 0.07995 0.08939 2.76% FabArray::setVal() 143 0.05455 0.06621 0.07248 2.24% Castro::reset_internal_energy(Fab) 1008 0.04284 0.0456 0.04725 1.46% FillPatchIterator::Initialize 41 0.03883 0.03983 0.04126 1.28% StateData::FillBoundary(geom) 41 0.03081 0.0343 0.03987 1.23% FabArray::ParallelCopy_nowait() 41 0.02503 0.03591 0.03898 1.21% Castro::normalize_species() 62 0.03405 0.03462 0.03527 1.09% Castro::initialize_do_advance() 10 0.01285 0.01948 0.02582 0.80% Gravity::interpolate_monopole_grav() 21 0.02527 0.02544 0.02576 0.80% Castro::construct_new_gravity_source() 10 0.02182 0.02323 0.02481 0.77% Castro::computeTemp() 63 0.01783 0.01856 0.01932 0.60% FabArray::Saxpy() 20 0.01073 0.01247 0.01398 0.43% Castro::initialize_advance() 10 0.005249 0.01046 0.01394 0.43% Amr::writePlotFile() 2 0.007225 0.01007 0.0125 0.39% FabArray::setDomainBndry() 41 0.007161 0.01099 0.01191 0.37% Amr::coarseTimeStep() 10 0.005259 0.008351 0.01164 0.36% MultiFab::contains_nan() 20 0.009532 0.01026 0.01155 0.36% VisMF::Write(FabArray) 2 0.00703 0.008163 0.01062 0.33% Castro::construct_old_gravity_source() 10 0.00701 0.009589 0.01053 0.33% Castro::initMFs() 1 0.006149 0.006677 0.008611 0.27% Castro::finalize_do_advance() 10 0.001231 0.004591 0.007673 0.24% Castro::enforce_min_density() 62 0.006115 0.006364 0.006601 0.20% Castro::construct_new_source() 50 0.005695 0.006076 0.006409 0.20% Gravity::get_new_grav_vector() 11 0.002788 0.003774 0.004108 0.13% Gravity::get_old_grav_vector() 10 0.001713 0.00244 0.003048 0.09% main() 1 0.001931 0.002136 0.002326 0.07% AmrLevel::FillPatch() 41 0.0008133 0.001122 0.001289 0.04% Amr::timeStep() 10 0.0001344 0.0001804 0.0003985 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002491 0.000258 0.0002783 0.01% Castro::do_advance_ctu() 10 0.0001452 0.0001643 0.0002008 0.01% Castro::clean_state() 62 0.0001196 0.0001487 0.0001634 0.01% StateDataPhysBCFunct::() 41 9.959e-05 0.0001182 0.0001624 0.01% Castro::Castro() 1 5.507e-05 8.733e-05 0.0001303 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001063 0.0001135 0.0001278 0.00% Castro::do_old_sources() 10 8.138e-05 9.649e-05 0.0001273 0.00% FabArray::ParallelCopy() 41 7.931e-05 8.756e-05 9.913e-05 0.00% Castro::construct_old_source() 50 6e-05 7.765e-05 9.167e-05 0.00% Amr::FinalizeInit() 1 3.783e-06 1.426e-05 7.981e-05 0.00% FillPatchSingleLevel 41 6.763e-05 7.255e-05 7.596e-05 0.00% Castro::apply_source_to_state() 20 4.778e-05 5.471e-05 6.485e-05 0.00% Castro::subcycle_advance_ctu() 10 4.285e-05 5.369e-05 6.337e-05 0.00% Castro::do_new_sources() 10 5.39e-05 5.776e-05 6.091e-05 0.00% Amr::defBaseLevel() 1 3.674e-05 4.537e-05 5.812e-05 0.00% Castro::construct_old_gravity() 10 3.738e-05 4.072e-05 4.804e-05 0.00% Castro::advance() 10 3.656e-05 4.067e-05 4.436e-05 0.00% Castro::construct_new_gravity() 10 3.032e-05 3.457e-05 4.047e-05 0.00% Castro::check_for_nan() 20 2.377e-05 2.515e-05 2.729e-05 0.00% Castro::expand_state() 10 2.042e-05 2.232e-05 2.478e-05 0.00% Castro::post_timestep() 10 1.524e-05 1.614e-05 1.792e-05 0.00% Castro::computeNewDt() 9 8.206e-06 9.605e-06 1.063e-05 0.00% Castro::computeInitialDt() 2 5.984e-06 6.943e-06 7.78e-06 0.00% Amr::InitializeInit() 1 2.625e-06 3.479e-06 6.6e-06 0.00% Castro::post_init() 1 2.615e-06 3.138e-06 4.313e-06 0.00% Amr::init() 1 1.928e-06 2.41e-06 3.216e-06 0.00% Amr::initialInit() 1 1.402e-06 1.857e-06 2.379e-06 0.00% Other 203 0.01037 0.01296 0.01477 0.46% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.233 3.234 3.234 100.00% Amr::coarseTimeStep() 10 3.053 3.053 3.053 94.38% Amr::timeStep() 10 3.03 3.033 3.036 93.87% Castro::advance() 10 3.015 3.019 3.022 93.41% Castro::subcycle_advance_ctu() 10 2.943 2.949 2.965 91.67% Castro::do_advance_ctu() 10 2.943 2.949 2.965 91.67% Castro::construct_ctu_hydro_source() 10 2.191 2.202 2.209 68.30% Gravity::make_radial_gravity() 21 0.299 0.3091 0.3204 9.91% AmrLevel::FillPatch() 41 0.2063 0.2189 0.2305 7.13% Gravity::get_new_grav_vector() 11 0.2061 0.207 0.2081 6.43% check_for_negative_density() 10 0.02745 0.1157 0.1969 6.09% Castro::construct_old_gravity() 10 0.1807 0.1876 0.1964 6.07% Gravity::get_old_grav_vector() 10 0.1799 0.1869 0.1958 6.05% FillPatchIterator::Initialize 41 0.1754 0.187 0.1947 6.02% Castro::construct_new_gravity() 10 0.1845 0.1853 0.1866 5.77% Castro::initialize_do_advance() 10 0.1618 0.1682 0.1728 5.34% Amr::init() 1 0.1708 0.1719 0.1722 5.32% Amr::initialInit() 1 0.1563 0.1579 0.1583 4.89% FillPatchIterator::FillFromLevel0() 41 0.123 0.1362 0.1463 4.52% FillPatchSingleLevel 41 0.1229 0.1361 0.1461 4.52% Amr::InitializeInit() 1 0.05574 0.08986 0.1314 4.06% Amr::defBaseLevel() 1 0.05573 0.08986 0.1314 4.06% Castro::expand_state() 10 0.1112 0.1148 0.1197 3.70% Castro::do_old_sources() 10 0.09745 0.1059 0.1158 3.58% FabArray::ParallelCopy() 41 0.09108 0.1016 0.1151 3.56% Castro::initData() 1 0.03812 0.07264 0.1137 3.51% Castro::estTimeStep() 21 0.03505 0.07366 0.1097 3.39% Castro::clean_state() 62 0.1015 0.1047 0.1072 3.31% Amr::FinalizeInit() 1 0.02493 0.06801 0.1022 3.16% FabArray::ParallelCopy_finish() 41 0.05268 0.06552 0.08991 2.78% amrex::Copy() 193 0.06231 0.07995 0.08939 2.76% Castro::computeInitialDt() 2 0.002392 0.04496 0.07908 2.44% FabArray::setVal() 143 0.05455 0.06621 0.07248 2.24% Castro::initialize_advance() 10 0.05404 0.06673 0.07226 2.23% Castro::computeTemp() 63 0.06092 0.06442 0.06682 2.07% Castro::do_new_sources() 10 0.05684 0.06063 0.06566 2.03% Castro::reset_internal_energy(MultiFab) 63 0.04309 0.04586 0.0475 1.47% Castro::reset_internal_energy(Fab) 1008 0.04284 0.0456 0.04725 1.46% StateDataPhysBCFunct::() 41 0.03091 0.03442 0.03999 1.24% StateData::FillBoundary(geom) 41 0.03081 0.0343 0.03987 1.23% FabArray::ParallelCopy_nowait() 41 0.02514 0.03601 0.03908 1.21% Castro::normalize_species() 62 0.03405 0.03462 0.03527 1.09% Castro::construct_new_source() 50 0.02751 0.0293 0.03113 0.96% Castro::finalize_do_advance() 10 0.01467 0.02314 0.03019 0.93% Gravity::interpolate_monopole_grav() 21 0.02527 0.02544 0.02576 0.80% Castro::construct_new_gravity_source() 10 0.02182 0.02323 0.02481 0.77% Castro::post_init() 1 0.02248 0.02287 0.023 0.71% Amr::writePlotFile() 2 0.02073 0.02086 0.02137 0.66% Castro::post_timestep() 10 0.01352 0.01403 0.01452 0.45% Castro::apply_source_to_state() 20 0.01079 0.01252 0.01404 0.43% FabArray::Saxpy() 20 0.01073 0.01247 0.01398 0.43% FabArray::setDomainBndry() 41 0.007161 0.01099 0.01191 0.37% Castro::Castro() 1 0.009742 0.01075 0.01183 0.37% Castro::check_for_nan() 20 0.009556 0.01029 0.01157 0.36% MultiFab::contains_nan() 20 0.009532 0.01026 0.01155 0.36% Castro::construct_old_source() 50 0.00707 0.009666 0.01062 0.33% VisMF::Write(FabArray) 2 0.00703 0.008163 0.01062 0.33% Castro::construct_old_gravity_source() 10 0.00701 0.009589 0.01053 0.33% Castro::computeNewDt() 9 0.01016 0.01017 0.01017 0.31% Castro::initMFs() 1 0.006149 0.006677 0.008611 0.27% Castro::enforce_min_density() 62 0.006115 0.006364 0.006601 0.20% Other 203 0.01911 0.02354 0.02639 0.82% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 3 B 6 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8647 KiB 8657 KiB 8660 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6739 KiB 6746 KiB 6751 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7120 KiB 7128 KiB 7131 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4534 KiB 4541 KiB 4561 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 236 KiB 250 KiB 261 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 13 KiB 15 KiB 19 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2788 KiB 2794 KiB 2797 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 235 KiB 243 KiB 252 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 42 KiB 47 KiB 50 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2024 KiB 2026 KiB 2027 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 81 KiB 82 KiB 82 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 71 KiB 74 KiB 77 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.06-5-g65db2e4e678a) finalized