Initializing AMReX (26.06-8-g5bee7705813e)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.06-8-g5bee7705813e) initialized Starting run at 05:35:48 UTC on 2026-06-05. Successfully read inputs file ... Castro git describe: 26.06-1-g524fc2e04 AMReX git describe: 26.06-8-g5bee77058 Microphysics git describe: 26.06-4-g4bad0947 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014072681 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.332990684 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.323267857 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.315721487 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.315995447 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.362832611 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.288774376 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.275519983 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.275731261 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.275154164 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.279144818 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.00662629 seconds Ending run at 05:35:51 UTC on 2026-06-05. Run time = 3.238936271 Run time without initialization = 3.054893559 Average number of zones advanced per microsecond: 0.858 Average number of zones advanced per microsecond per rank: 0.107 TinyProfiler total time across processes [min...avg...max]: 3.2355 ... 3.2379 ... 3.2391 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 1.9583 2.0350 2.1133 65.24% Gravity::make_radial_gravity() 21 0.2825 0.2952 0.3078 9.50% check_for_negative_density() 10 0.03536 0.1227 0.2054 6.34% Castro::estTimeStep() 21 0.02587 0.07919 0.1183 3.65% Castro::initData() 1 0.03426 0.07043 0.1174 3.62% FabArray::ParallelCopy_finish() 41 0.06173 0.07931 0.1119 3.45% amrex::Copy() 193 0.06574 0.08101 0.09485 2.93% FabArray::setVal() 143 0.05848 0.06793 0.07441 2.30% Castro::reset_internal_energy(Fab) 1008 0.0431 0.04674 0.05543 1.71% FillPatchIterator::Initialize 41 0.03818 0.04126 0.04656 1.44% FabArray::ParallelCopy_nowait() 41 0.02704 0.03424 0.03762 1.16% StateData::FillBoundary(geom) 41 0.0306 0.03333 0.03545 1.09% Castro::normalize_species() 62 0.03369 0.03432 0.03511 1.08% Gravity::interpolate_monopole_grav() 21 0.02477 0.02554 0.02765 0.85% Castro::initialize_do_advance() 10 0.01614 0.02059 0.02729 0.84% Castro::construct_new_gravity_source() 10 0.02099 0.02242 0.02351 0.73% Castro::computeTemp() 63 0.01762 0.01885 0.02133 0.66% MultiFab::contains_nan() 20 0.009543 0.01132 0.0136 0.42% Castro::initialize_advance() 10 0.005365 0.0102 0.01324 0.41% FabArray::Saxpy() 20 0.01068 0.01221 0.01274 0.39% Amr::writePlotFile() 2 0.007328 0.01007 0.01195 0.37% FabArray::setDomainBndry() 41 0.007752 0.01033 0.01128 0.35% Amr::coarseTimeStep() 10 0.003802 0.007595 0.01085 0.34% VisMF::Write(FabArray) 2 0.006766 0.008183 0.01058 0.33% Castro::construct_old_gravity_source() 10 0.006357 0.008769 0.009559 0.30% Castro::finalize_do_advance() 10 0.001084 0.004624 0.008558 0.26% StateData::define() 4 0.00505 0.005801 0.008524 0.26% Castro::initMFs() 1 0.006192 0.006767 0.007843 0.24% Castro::construct_new_source() 50 0.005872 0.006118 0.006358 0.20% Gravity::get_old_grav_vector() 10 0.002064 0.003084 0.004431 0.14% Gravity::get_new_grav_vector() 11 0.00298 0.003777 0.004112 0.13% main() 1 0.001856 0.00252 0.002738 0.08% AmrLevel::FillPatch() 41 0.0009441 0.001119 0.001273 0.04% Amr::timeStep() 10 0.0001399 0.0001849 0.0003814 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002446 0.0002677 0.0003152 0.01% Castro::do_advance_ctu() 10 0.0001571 0.0001659 0.0001798 0.01% Castro::clean_state() 62 0.0001357 0.0001484 0.0001626 0.01% StateDataPhysBCFunct::() 41 9.818e-05 0.0001196 0.0001593 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001091 0.0001213 0.0001406 0.00% Amr::defBaseLevel() 1 3.248e-05 5.046e-05 0.0001376 0.00% Castro::do_old_sources() 10 9.313e-05 9.768e-05 0.0001039 0.00% FabArray::ParallelCopy() 41 7.718e-05 8.642e-05 9.425e-05 0.00% Amr::FinalizeInit() 1 4.161e-06 1.544e-05 8.96e-05 0.00% Castro::Castro() 1 4.945e-05 7.056e-05 8.713e-05 0.00% Castro::construct_old_source() 50 6.249e-05 7.577e-05 8.138e-05 0.00% FillPatchSingleLevel 41 6.376e-05 7.102e-05 7.783e-05 0.00% Castro::subcycle_advance_ctu() 10 4.583e-05 5.577e-05 6.735e-05 0.00% Castro::do_new_sources() 10 5.925e-05 6.272e-05 6.657e-05 0.00% Castro::construct_old_gravity() 10 4.287e-05 4.901e-05 6.371e-05 0.00% Castro::apply_source_to_state() 20 5.099e-05 5.477e-05 5.971e-05 0.00% Castro::advance() 10 3.663e-05 4.544e-05 5.369e-05 0.00% Castro::construct_new_gravity() 10 3.259e-05 3.717e-05 4.391e-05 0.00% Castro::check_for_nan() 20 2.297e-05 2.744e-05 3.555e-05 0.00% Castro::expand_state() 10 2.012e-05 2.175e-05 2.363e-05 0.00% Castro::post_init() 1 2.777e-06 8.424e-06 2.294e-05 0.00% Castro::post_timestep() 10 1.443e-05 1.682e-05 1.949e-05 0.00% AmrLevel::AmrLevel(dm) 1 6.026e-06 8.786e-06 1.616e-05 0.00% Amr::InitializeInit() 1 2.448e-06 4.343e-06 1.448e-05 0.00% Castro::computeNewDt() 9 8.466e-06 9.619e-06 1.018e-05 0.00% Castro::computeInitialDt() 2 5.73e-06 6.793e-06 7.581e-06 0.00% Amr::init() 1 1.739e-06 2.433e-06 4.086e-06 0.00% Amr::initialInit() 1 1.361e-06 1.787e-06 2.217e-06 0.00% Other 260 0.01139 0.01545 0.01787 0.55% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.236 3.238 3.239 100.00% Amr::coarseTimeStep() 10 3.046 3.046 3.046 94.03% Amr::timeStep() 10 3.023 3.027 3.03 93.56% Castro::advance() 10 3.009 3.012 3.016 93.12% Castro::subcycle_advance_ctu() 10 2.933 2.942 2.957 91.29% Castro::do_advance_ctu() 10 2.933 2.942 2.957 91.29% Castro::construct_ctu_hydro_source() 10 2.168 2.177 2.183 67.40% Gravity::make_radial_gravity() 21 0.3008 0.3124 0.3254 10.04% AmrLevel::FillPatch() 41 0.2176 0.232 0.2492 7.69% FillPatchIterator::Initialize 41 0.1851 0.199 0.2216 6.84% Castro::construct_old_gravity() 10 0.1896 0.1985 0.2092 6.46% Gravity::get_old_grav_vector() 10 0.1885 0.1976 0.2086 6.44% Gravity::get_new_grav_vector() 11 0.2035 0.2043 0.2058 6.35% check_for_negative_density() 10 0.03536 0.1227 0.2054 6.34% Castro::initialize_do_advance() 10 0.1714 0.1821 0.1952 6.03% Amr::init() 1 0.1802 0.1827 0.1838 5.67% Castro::construct_new_gravity() 10 0.1812 0.1818 0.1829 5.65% FillPatchIterator::FillFromLevel0() 41 0.1293 0.1474 0.1719 5.31% FillPatchSingleLevel 41 0.1292 0.1472 0.1717 5.30% Amr::initialInit() 1 0.1659 0.1684 0.1695 5.23% Castro::expand_state() 10 0.1187 0.1255 0.1398 4.32% Amr::InitializeInit() 1 0.05696 0.09264 0.1397 4.31% Amr::defBaseLevel() 1 0.05696 0.09263 0.1397 4.31% FabArray::ParallelCopy() 41 0.09836 0.1137 0.1391 4.29% Castro::initData() 1 0.03799 0.07393 0.1207 3.73% Castro::estTimeStep() 21 0.02587 0.07919 0.1183 3.65% Castro::clean_state() 62 0.1004 0.1059 0.1174 3.63% Castro::do_old_sources() 10 0.09816 0.1049 0.1143 3.53% Amr::FinalizeInit() 1 0.02617 0.0758 0.1125 3.47% FabArray::ParallelCopy_finish() 41 0.06173 0.07931 0.1119 3.45% amrex::Copy() 193 0.06574 0.08101 0.09485 2.93% Castro::computeInitialDt() 2 0.00244 0.05207 0.08873 2.74% Castro::computeTemp() 63 0.06097 0.06587 0.07708 2.38% Castro::initialize_advance() 10 0.05349 0.06726 0.07549 2.33% FabArray::setVal() 143 0.05848 0.06793 0.07441 2.30% Castro::do_new_sources() 10 0.05495 0.0598 0.06365 1.97% Castro::reset_internal_energy(MultiFab) 63 0.04335 0.04701 0.05575 1.72% Castro::reset_internal_energy(Fab) 1008 0.0431 0.04674 0.05543 1.71% FabArray::ParallelCopy_nowait() 41 0.02714 0.03433 0.03771 1.16% StateDataPhysBCFunct::() 41 0.03074 0.03345 0.03555 1.10% StateData::FillBoundary(geom) 41 0.0306 0.03333 0.03545 1.09% Castro::normalize_species() 62 0.03369 0.03432 0.03511 1.08% Castro::construct_new_source() 50 0.02686 0.02854 0.02975 0.92% Gravity::interpolate_monopole_grav() 21 0.02477 0.02554 0.02765 0.85% Castro::finalize_do_advance() 10 0.0168 0.02169 0.02751 0.85% Castro::post_init() 1 0.02345 0.02354 0.02358 0.73% Castro::construct_new_gravity_source() 10 0.02099 0.02242 0.02351 0.73% Amr::writePlotFile() 2 0.02093 0.02101 0.0211 0.65% Castro::post_timestep() 10 0.01386 0.01424 0.01436 0.44% Castro::check_for_nan() 20 0.009569 0.01135 0.01362 0.42% MultiFab::contains_nan() 20 0.009543 0.01132 0.0136 0.42% Castro::apply_source_to_state() 20 0.01073 0.01227 0.0128 0.40% FabArray::Saxpy() 20 0.01068 0.01221 0.01274 0.39% Castro::Castro() 1 0.009655 0.01028 0.01129 0.35% FabArray::setDomainBndry() 41 0.007752 0.01033 0.01128 0.35% VisMF::Write(FabArray) 2 0.006766 0.008183 0.01058 0.33% Castro::computeNewDt() 9 0.01002 0.01007 0.0101 0.31% Castro::construct_old_source() 50 0.006419 0.008844 0.009636 0.30% Castro::construct_old_gravity_source() 10 0.006357 0.008769 0.009559 0.30% AmrLevel::AmrLevel(dm) 1 0.00506 0.00581 0.00854 0.26% StateData::define() 4 0.00505 0.005801 0.008524 0.26% Castro::initMFs() 1 0.006192 0.006767 0.007843 0.24% Other 260 0.01526 0.02206 0.02573 0.79% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 13 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 4 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 13 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8638 KiB 8649 KiB 8653 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6714 KiB 6721 KiB 6724 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7114 KiB 7122 KiB 7125 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4512 KiB 4524 KiB 4546 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 251 KiB 266 KiB 290 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 13 KiB 15 KiB 19 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2778 KiB 2784 KiB 2788 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 236 KiB 245 KiB 255 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 46 KiB 53 KiB 65 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2022 KiB 2024 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 80 KiB 80 KiB 81 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 74 KiB 78 KiB 82 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.06-8-g5bee7705813e) finalized