Initializing AMReX (26.06-11-g9ed35ab0e584)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.06-11-g9ed35ab0e584) initialized Starting run at 05:17:04 UTC on 2026-06-11. Successfully read inputs file ... Castro git describe: 26.06-5-g350b833bf AMReX git describe: 26.06-11-g9ed35ab0e Microphysics git describe: 26.06-5-g844166bc reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014265733 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.321432301 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.316410211 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.316761508 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.318344828 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.345535391 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.286410906 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.279268176 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.281026767 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.282574855 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.278317674 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007716218 seconds Ending run at 05:17:08 UTC on 2026-06-11. Run time = 3.229034604 Run time without initialization = 3.036718302 Average number of zones advanced per microsecond: 0.863 Average number of zones advanced per microsecond per rank: 0.108 TinyProfiler total time across processes [min...avg...max]: 3.2245 ... 3.2278 ... 3.2291 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0148 2.0626 2.1197 65.64% Gravity::make_radial_gravity() 21 0.2835 0.2884 0.297 9.20% check_for_negative_density() 10 0.03995 0.0988 0.1498 4.64% Castro::estTimeStep() 21 0.03258 0.08373 0.1261 3.90% Castro::initData() 1 0.03438 0.07195 0.1209 3.74% amrex::Copy() 193 0.0757 0.08097 0.0866 2.68% FabArray::setVal() 143 0.06503 0.06827 0.07299 2.26% FabArray::ParallelCopy_finish() 41 0.03263 0.05492 0.06435 1.99% FillPatchIterator::Initialize 41 0.03854 0.04229 0.04881 1.51% Castro::reset_internal_energy(Fab) 1008 0.04468 0.04562 0.04674 1.45% FabArray::ParallelCopy_nowait() 41 0.0331 0.03651 0.03936 1.22% StateData::FillBoundary(geom) 41 0.03065 0.03304 0.03581 1.11% Castro::normalize_species() 62 0.03373 0.03439 0.03494 1.08% Castro::initialize_do_advance() 10 0.01236 0.02138 0.03232 1.00% Gravity::interpolate_monopole_grav() 21 0.02488 0.02521 0.0255 0.79% Castro::construct_new_gravity_source() 10 0.02285 0.02384 0.02487 0.77% Castro::computeTemp() 63 0.01826 0.01864 0.01901 0.59% FabArray::Saxpy() 20 0.01298 0.01375 0.01436 0.44% Castro::initialize_advance() 10 0.005789 0.0104 0.01306 0.40% FabArray::setDomainBndry() 41 0.008477 0.01106 0.01247 0.39% VisMF::Write(FabArray) 2 0.008041 0.008839 0.01235 0.38% Castro::construct_old_gravity_source() 10 0.009376 0.01079 0.01202 0.37% Amr::coarseTimeStep() 10 0.003056 0.007504 0.01167 0.36% Amr::writePlotFile() 2 0.006818 0.01055 0.01152 0.36% MultiFab::contains_nan() 20 0.01 0.01049 0.01098 0.34% Castro::initMFs() 1 0.006196 0.007325 0.01051 0.33% Castro::finalize_do_advance() 10 0.001303 0.005896 0.01036 0.32% StateData::define() 4 0.004987 0.005938 0.008126 0.25% Castro::construct_new_source() 50 0.006095 0.006365 0.006639 0.21% Gravity::get_new_grav_vector() 11 0.003656 0.00408 0.004329 0.13% Gravity::get_old_grav_vector() 10 0.002364 0.002677 0.003039 0.09% main() 1 0.001673 0.002031 0.002392 0.07% AmrLevel::FillPatch() 41 0.0009975 0.0012 0.001567 0.05% Amr::timeStep() 10 0.0001353 0.0001858 0.0004094 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002405 0.0002569 0.0002892 0.01% Castro::do_advance_ctu() 10 0.000153 0.0001772 0.0001986 0.01% Castro::clean_state() 62 0.0001367 0.000148 0.0001594 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001123 0.0001234 0.0001492 0.00% StateDataPhysBCFunct::() 41 0.0001063 0.0001153 0.0001345 0.00% Castro::construct_old_source() 50 7.372e-05 8.87e-05 0.0001074 0.00% Castro::do_old_sources() 10 8.078e-05 9.697e-05 0.0001064 0.00% FabArray::ParallelCopy() 41 8.052e-05 9.509e-05 0.0001062 0.00% Castro::Castro() 1 6.842e-05 8.134e-05 0.0001038 0.00% Amr::FinalizeInit() 1 3.812e-06 1.532e-05 8.946e-05 0.00% FillPatchSingleLevel 41 6.701e-05 7.461e-05 8.688e-05 0.00% Castro::do_new_sources() 10 5.525e-05 6.48e-05 7.289e-05 0.00% Castro::apply_source_to_state() 20 5.68e-05 6.237e-05 6.857e-05 0.00% Castro::subcycle_advance_ctu() 10 5.25e-05 5.617e-05 6.1e-05 0.00% Amr::defBaseLevel() 1 3.328e-05 3.986e-05 5.561e-05 0.00% Castro::construct_old_gravity() 10 3.823e-05 4.423e-05 5.249e-05 0.00% Castro::advance() 10 3.8e-05 4.2e-05 4.964e-05 0.00% Castro::construct_new_gravity() 10 3.211e-05 3.808e-05 4.667e-05 0.00% Castro::check_for_nan() 20 2.351e-05 2.571e-05 2.774e-05 0.00% Castro::expand_state() 10 1.886e-05 2.346e-05 2.716e-05 0.00% Castro::post_timestep() 10 1.28e-05 1.679e-05 1.95e-05 0.00% AmrLevel::AmrLevel(dm) 1 5.953e-06 8.077e-06 1.29e-05 0.00% Castro::post_init() 1 2.79e-06 6.762e-06 1.187e-05 0.00% Castro::computeNewDt() 9 8.302e-06 9.298e-06 1.15e-05 0.00% Castro::computeInitialDt() 2 5.604e-06 7.33e-06 8.454e-06 0.00% Amr::InitializeInit() 1 2.442e-06 3.312e-06 5.389e-06 0.00% Amr::init() 1 1.729e-06 2.138e-06 2.842e-06 0.00% Amr::initialInit() 1 1.324e-06 1.859e-06 2.288e-06 0.00% Other 260 0.01157 0.01637 0.01938 0.60% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.224 3.228 3.229 100.00% Amr::coarseTimeStep() 10 3.027 3.027 3.027 93.73% Amr::timeStep() 10 3.004 3.008 3.013 93.29% Castro::advance() 10 2.989 2.994 2.998 92.85% Castro::subcycle_advance_ctu() 10 2.919 2.924 2.937 90.95% Castro::do_advance_ctu() 10 2.919 2.924 2.937 90.95% Castro::construct_ctu_hydro_source() 10 2.178 2.18 2.184 67.63% Gravity::make_radial_gravity() 21 0.3017 0.3063 0.3134 9.71% AmrLevel::FillPatch() 41 0.1935 0.2108 0.2231 6.91% Gravity::get_new_grav_vector() 11 0.2035 0.2042 0.2053 6.36% Castro::construct_old_gravity() 10 0.1841 0.1894 0.1976 6.12% Gravity::get_old_grav_vector() 10 0.1833 0.1887 0.197 6.10% Amr::init() 1 0.1879 0.1909 0.1923 5.96% FillPatchIterator::Initialize 41 0.1613 0.1783 0.1883 5.83% Castro::construct_new_gravity() 10 0.181 0.1818 0.1826 5.65% Amr::initialInit() 1 0.1735 0.1764 0.1778 5.51% Castro::initialize_do_advance() 10 0.1637 0.1712 0.1762 5.46% check_for_negative_density() 10 0.03995 0.0988 0.1498 4.64% Amr::InitializeInit() 1 0.0577 0.09582 0.1472 4.56% Amr::defBaseLevel() 1 0.0577 0.09581 0.1472 4.56% FillPatchIterator::FillFromLevel0() 41 0.1019 0.125 0.136 4.21% FillPatchSingleLevel 41 0.1017 0.1249 0.1359 4.21% Castro::estTimeStep() 21 0.03258 0.08373 0.1261 3.90% Castro::expand_state() 10 0.1016 0.116 0.1246 3.86% Castro::initData() 1 0.03799 0.07549 0.1243 3.85% Amr::FinalizeInit() 1 0.02635 0.0806 0.1197 3.71% Castro::clean_state() 62 0.1029 0.1046 0.1059 3.28% Castro::do_old_sources() 10 0.09497 0.09855 0.1008 3.12% FabArray::ParallelCopy() 41 0.06919 0.09163 0.09992 3.09% Castro::computeInitialDt() 2 0.002468 0.05679 0.09601 2.97% amrex::Copy() 193 0.0757 0.08097 0.0866 2.68% FabArray::setVal() 143 0.06503 0.06827 0.07299 2.26% Castro::initialize_advance() 10 0.05718 0.06716 0.07081 2.19% Castro::do_new_sources() 10 0.05988 0.06343 0.0679 2.10% Castro::computeTemp() 63 0.06351 0.06452 0.06572 2.04% FabArray::ParallelCopy_finish() 41 0.03263 0.05492 0.06435 1.99% Castro::reset_internal_energy(MultiFab) 63 0.04493 0.04588 0.04699 1.46% Castro::reset_internal_energy(Fab) 1008 0.04468 0.04562 0.04674 1.45% FabArray::ParallelCopy_nowait() 41 0.03321 0.03661 0.03946 1.22% StateDataPhysBCFunct::() 41 0.03077 0.03315 0.03591 1.11% StateData::FillBoundary(geom) 41 0.03065 0.03304 0.03581 1.11% Castro::normalize_species() 62 0.03373 0.03439 0.03494 1.08% Castro::construct_new_source() 50 0.02906 0.0302 0.0315 0.98% Castro::finalize_do_advance() 10 0.01547 0.02299 0.02933 0.91% Gravity::interpolate_monopole_grav() 21 0.02488 0.02521 0.0255 0.79% Castro::construct_new_gravity_source() 10 0.02285 0.02384 0.02487 0.77% Castro::post_init() 1 0.0234 0.02359 0.02372 0.73% Amr::writePlotFile() 2 0.0222 0.0223 0.02246 0.70% Castro::Castro() 1 0.009785 0.01127 0.01461 0.45% Castro::apply_source_to_state() 20 0.01304 0.01382 0.01443 0.45% Castro::post_timestep() 10 0.01395 0.01421 0.01438 0.45% FabArray::Saxpy() 20 0.01298 0.01375 0.01436 0.44% FabArray::setDomainBndry() 41 0.008477 0.01106 0.01247 0.39% VisMF::Write(FabArray) 2 0.008041 0.008839 0.01235 0.38% Castro::construct_old_source() 50 0.00945 0.01088 0.01213 0.38% Castro::construct_old_gravity_source() 10 0.009376 0.01079 0.01202 0.37% Castro::check_for_nan() 20 0.01003 0.01051 0.01101 0.34% MultiFab::contains_nan() 20 0.01 0.01049 0.01098 0.34% Castro::initMFs() 1 0.006196 0.007325 0.01051 0.33% Castro::computeNewDt() 9 0.009848 0.009862 0.009882 0.31% AmrLevel::AmrLevel(dm) 1 0.004994 0.005946 0.008139 0.25% StateData::define() 4 0.004987 0.005938 0.008126 0.25% Other 260 0.01525 0.02347 0.02813 0.87% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 2 B 3 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8638 KiB 8646 KiB 8652 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6694 KiB 6700 KiB 6703 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7113 KiB 7121 KiB 7123 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4502 KiB 4507 KiB 4522 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 219 KiB 243 KiB 259 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 15 KiB 17 KiB 21 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2768 KiB 2775 KiB 2779 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 237 KiB 241 KiB 246 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 29 KiB 43 KiB 49 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2022 KiB 2024 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 80 KiB 81 KiB 81 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 72 KiB 74 KiB 78 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.06-11-g9ed35ab0e584) finalized