Initializing AMReX (26.06-13-g87eac2327e9f)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.06-13-g87eac2327e9f) initialized Starting run at 05:17:13 UTC on 2026-06-17. Successfully read inputs file ... Castro git describe: 26.06-5-g350b833bf AMReX git describe: 26.06-13-g87eac2327 Microphysics git describe: 26.06-6-gd76fd209 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014113126 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.332600169 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.324090138 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.330289042 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.324121013 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.347481739 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.279746698 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.272941772 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.275062423 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.273226288 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.273198741 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.006851685 seconds Ending run at 05:17:16 UTC on 2026-06-17. Run time = 3.202128716 Run time without initialization = 3.042195454 Average number of zones advanced per microsecond: 0.862 Average number of zones advanced per microsecond per rank: 0.108 TinyProfiler total time across processes [min...avg...max]: 3.2013 ... 3.2019 ... 3.2022 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 1.9204 2.0684 2.1536 67.25% Gravity::make_radial_gravity() 21 0.279 0.2851 0.3047 9.52% check_for_negative_density() 10 0.04185 0.1284 0.2819 8.80% Castro::initData() 1 0.03414 0.06976 0.09941 3.10% Castro::estTimeStep() 21 0.02527 0.05867 0.0971 3.03% amrex::Copy() 193 0.06151 0.07979 0.08699 2.72% FabArray::ParallelCopy_finish() 41 0.03611 0.04488 0.07494 2.34% FabArray::setVal() 143 0.05249 0.06534 0.07006 2.19% Castro::reset_internal_energy(Fab) 1008 0.0434 0.04551 0.04674 1.46% FillPatchIterator::Initialize 41 0.03786 0.03987 0.04182 1.31% FabArray::ParallelCopy_nowait() 41 0.02558 0.03674 0.04 1.25% StateData::FillBoundary(geom) 41 0.02816 0.03296 0.03564 1.11% Castro::normalize_species() 62 0.03365 0.03433 0.03522 1.10% Gravity::interpolate_monopole_grav() 21 0.02452 0.02517 0.02552 0.80% Castro::construct_new_gravity_source() 10 0.02176 0.02304 0.02474 0.77% Castro::initialize_do_advance() 10 0.01895 0.02029 0.02425 0.76% Castro::computeTemp() 63 0.01797 0.01848 0.01883 0.59% FabArray::Saxpy() 20 0.01064 0.01279 0.01353 0.42% Castro::initialize_advance() 10 0.005214 0.009926 0.01308 0.41% FabArray::setDomainBndry() 41 0.008056 0.01113 0.01226 0.38% VisMF::Write(FabArray) 2 0.007983 0.008529 0.01185 0.37% MultiFab::contains_nan() 20 0.009505 0.01022 0.01157 0.36% Castro::construct_old_gravity_source() 10 0.006881 0.009665 0.01066 0.33% Amr::writePlotFile() 2 0.007253 0.00974 0.01026 0.32% Castro::initMFs() 1 0.006246 0.00674 0.008238 0.26% Castro::enforce_min_density() 62 0.006145 0.00643 0.006639 0.21% Castro::construct_new_source() 50 0.005411 0.006178 0.006514 0.20% Castro::finalize_do_advance() 10 0.00415 0.005078 0.00589 0.18% Amr::coarseTimeStep() 10 0.00396 0.004702 0.005418 0.17% Gravity::get_new_grav_vector() 11 0.002706 0.003884 0.004268 0.13% Gravity::get_old_grav_vector() 10 0.001772 0.00249 0.003104 0.10% main() 1 0.001738 0.001923 0.002067 0.06% AmrLevel::FillPatch() 41 0.0007653 0.001114 0.001272 0.04% Amr::timeStep() 10 0.000145 0.0001736 0.0003182 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002459 0.0002542 0.0002664 0.01% Castro::do_advance_ctu() 10 0.0001326 0.0001583 0.000183 0.01% Castro::clean_state() 62 0.0001297 0.0001453 0.0001637 0.01% FillPatchIterator::FillFromLevel0() 41 9.875e-05 0.0001063 0.0001144 0.00% Castro::Castro() 1 5.139e-05 8.41e-05 0.0001135 0.00% StateDataPhysBCFunct::() 41 0.0001025 0.0001062 0.0001115 0.00% Castro::do_old_sources() 10 7.352e-05 9.203e-05 0.0001032 0.00% Castro::construct_old_source() 50 4.986e-05 8.083e-05 9.91e-05 0.00% FabArray::ParallelCopy() 41 7.148e-05 8.596e-05 9.831e-05 0.00% FillPatchSingleLevel 41 6.292e-05 6.8e-05 8.097e-05 0.00% Castro::do_new_sources() 10 5.14e-05 6.145e-05 6.972e-05 0.00% Amr::FinalizeInit() 1 4.203e-06 1.199e-05 6.476e-05 0.00% Castro::subcycle_advance_ctu() 10 4.557e-05 5.107e-05 6.003e-05 0.00% Castro::apply_source_to_state() 20 4.814e-05 5.463e-05 5.966e-05 0.00% Amr::defBaseLevel() 1 3.766e-05 4.348e-05 5.712e-05 0.00% Castro::advance() 10 3.48e-05 4.109e-05 4.879e-05 0.00% Castro::construct_old_gravity() 10 3.287e-05 4.156e-05 4.849e-05 0.00% Castro::construct_new_gravity() 10 2.995e-05 3.465e-05 4.115e-05 0.00% Castro::check_for_nan() 20 2.328e-05 2.5e-05 2.765e-05 0.00% Castro::expand_state() 10 2.035e-05 2.196e-05 2.363e-05 0.00% Castro::post_timestep() 10 1.448e-05 1.636e-05 1.941e-05 0.00% Castro::computeNewDt() 9 8.392e-06 9.041e-06 1.016e-05 0.00% Castro::computeInitialDt() 2 6.352e-06 7.352e-06 9.005e-06 0.00% Castro::post_init() 1 2.287e-06 4.374e-06 8.845e-06 0.00% Amr::InitializeInit() 1 2.42e-06 3.229e-06 6.702e-06 0.00% Amr::init() 1 1.882e-06 2.165e-06 2.566e-06 0.00% Amr::initialInit() 1 1.215e-06 1.646e-06 2.119e-06 0.00% Other 203 0.009494 0.01292 0.01487 0.46% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.201 3.202 3.202 100.00% Amr::coarseTimeStep() 10 3.033 3.033 3.033 94.73% Amr::timeStep() 10 3.017 3.018 3.018 94.26% Castro::advance() 10 3.002 3.003 3.004 93.80% Castro::subcycle_advance_ctu() 10 2.931 2.935 2.951 92.14% Castro::do_advance_ctu() 10 2.931 2.935 2.951 92.14% Castro::construct_ctu_hydro_source() 10 2.213 2.216 2.221 69.36% Gravity::make_radial_gravity() 21 0.2964 0.3028 0.318 9.93% check_for_negative_density() 10 0.04185 0.1284 0.2819 8.80% AmrLevel::FillPatch() 41 0.1918 0.1985 0.205 6.40% Gravity::get_new_grav_vector() 11 0.2011 0.2022 0.2034 6.35% Castro::construct_old_gravity() 10 0.1801 0.185 0.1963 6.13% Gravity::get_old_grav_vector() 10 0.1794 0.1843 0.1957 6.11% Castro::construct_new_gravity() 10 0.1802 0.1808 0.1816 5.67% FillPatchIterator::Initialize 41 0.1582 0.166 0.179 5.59% Castro::initialize_do_advance() 10 0.1544 0.1602 0.1642 5.13% Amr::init() 1 0.1585 0.1594 0.1596 4.98% Amr::initialInit() 1 0.1443 0.1454 0.1459 4.56% FillPatchIterator::FillFromLevel0() 41 0.1075 0.115 0.1291 4.03% FillPatchSingleLevel 41 0.1074 0.1149 0.129 4.03% Amr::InitializeInit() 1 0.05445 0.09047 0.1204 3.76% Amr::defBaseLevel() 1 0.05444 0.09047 0.1204 3.76% Castro::expand_state() 10 0.1013 0.1063 0.1108 3.46% Castro::clean_state() 62 0.1016 0.1043 0.1057 3.30% Castro::initData() 1 0.03789 0.07341 0.1029 3.21% FabArray::ParallelCopy() 41 0.07434 0.0818 0.1007 3.14% Castro::do_old_sources() 10 0.0925 0.09486 0.09711 3.03% Castro::estTimeStep() 21 0.02527 0.05867 0.0971 3.03% Amr::FinalizeInit() 1 0.0255 0.05496 0.09124 2.85% amrex::Copy() 193 0.06151 0.07979 0.08699 2.72% FabArray::ParallelCopy_finish() 41 0.03611 0.04488 0.07494 2.34% FabArray::setVal() 143 0.05249 0.06534 0.07006 2.19% Castro::initialize_advance() 10 0.05064 0.06537 0.06969 2.18% Castro::computeInitialDt() 2 0.002417 0.03213 0.06838 2.14% Castro::do_new_sources() 10 0.05567 0.06098 0.06569 2.05% Castro::computeTemp() 63 0.06163 0.06425 0.06565 2.05% Castro::reset_internal_energy(MultiFab) 63 0.04366 0.04577 0.047 1.47% Castro::reset_internal_energy(Fab) 1008 0.0434 0.04551 0.04674 1.46% FabArray::ParallelCopy_nowait() 41 0.02568 0.03684 0.04009 1.25% StateDataPhysBCFunct::() 41 0.02827 0.03307 0.03574 1.12% StateData::FillBoundary(geom) 41 0.02816 0.03296 0.03564 1.11% Castro::normalize_species() 62 0.03365 0.03433 0.03522 1.10% Castro::construct_new_source() 50 0.02734 0.02921 0.03117 0.97% Castro::finalize_do_advance() 10 0.0161 0.02178 0.02877 0.90% Gravity::interpolate_monopole_grav() 21 0.02452 0.02517 0.02552 0.80% Castro::construct_new_gravity_source() 10 0.02176 0.02304 0.02474 0.77% Castro::post_init() 1 0.02215 0.02262 0.02287 0.71% Amr::writePlotFile() 2 0.02064 0.02088 0.02122 0.66% Castro::post_timestep() 10 0.01385 0.01416 0.01447 0.45% Castro::apply_source_to_state() 20 0.01069 0.01284 0.01359 0.42% FabArray::Saxpy() 20 0.01064 0.01279 0.01353 0.42% FabArray::setDomainBndry() 41 0.008056 0.01113 0.01226 0.38% VisMF::Write(FabArray) 2 0.007983 0.008529 0.01185 0.37% Castro::Castro() 1 0.01014 0.01067 0.01175 0.37% Castro::check_for_nan() 20 0.009529 0.01024 0.0116 0.36% MultiFab::contains_nan() 20 0.009505 0.01022 0.01157 0.36% Castro::construct_old_source() 50 0.006931 0.009746 0.01074 0.34% Castro::construct_old_gravity_source() 10 0.006881 0.009665 0.01066 0.33% Castro::computeNewDt() 9 0.009841 0.009851 0.009868 0.31% Castro::initMFs() 1 0.006246 0.00674 0.008238 0.26% Castro::enforce_min_density() 62 0.006145 0.00643 0.006639 0.21% Other 203 0.01843 0.02351 0.02661 0.83% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 3 B 4 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8645 KiB 8657 KiB 8661 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6767 KiB 6770 KiB 6772 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7120 KiB 7128 KiB 7131 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4557 KiB 4564 KiB 4581 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 219 KiB 228 KiB 236 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 15 KiB 16 KiB 19 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2805 KiB 2807 KiB 2809 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 235 KiB 240 KiB 252 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 34 KiB 37 KiB 44 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2024 KiB 2026 KiB 2027 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 80 KiB 80 KiB 81 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 71 KiB 73 KiB 78 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.06-13-g87eac2327e9f) finalized