Initializing AMReX (26.06-22-gee36883035e7)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.06-22-gee36883035e7) initialized Starting run at 05:37:02 UTC on 2026-06-23. Successfully read inputs file ... Castro git describe: 26.06-6-g98b28b05d AMReX git describe: 26.06-22-gee3688303 Microphysics git describe: 26.06-8-g88df0dd4 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.01448352 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.32744591 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.319424656 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.318476669 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.322883059 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.399507695 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.280146931 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.276923894 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.281669248 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.278604647 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.278611787 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.008207584 seconds Ending run at 05:37:06 UTC on 2026-06-23. Run time = 3.263752814 Run time without initialization = 3.094384609 Average number of zones advanced per microsecond: 0.847 Average number of zones advanced per microsecond per rank: 0.106 TinyProfiler total time across processes [min...avg...max]: 3.2579 ... 3.2617 ... 3.2638 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 1.9898 2.0517 2.1394 65.55% Gravity::make_radial_gravity() 21 0.2848 0.309 0.3238 9.92% check_for_negative_density() 10 0.03471 0.1195 0.1825 5.59% Castro::initData() 1 0.03493 0.07229 0.102 3.13% Castro::estTimeStep() 21 0.02798 0.05814 0.1009 3.09% amrex::Copy() 193 0.07831 0.08519 0.09686 2.97% FabArray::ParallelCopy_finish() 41 0.0528 0.07663 0.09425 2.89% FabArray::setVal() 143 0.06491 0.06829 0.07407 2.27% FillPatchIterator::Initialize 41 0.03797 0.04281 0.0504 1.54% Castro::reset_internal_energy(Fab) 1008 0.04394 0.04554 0.04689 1.44% FabArray::ParallelCopy_nowait() 41 0.03147 0.03669 0.04367 1.34% StateData::FillBoundary(geom) 41 0.03129 0.03379 0.03586 1.10% Castro::normalize_species() 62 0.03421 0.03443 0.03505 1.07% Castro::initialize_do_advance() 10 0.01531 0.02229 0.03401 1.04% Gravity::interpolate_monopole_grav() 21 0.02465 0.02525 0.02668 0.82% Castro::construct_new_gravity_source() 10 0.02247 0.02335 0.02553 0.78% Castro::computeTemp() 63 0.01841 0.01866 0.01907 0.58% FabArray::Saxpy() 20 0.01196 0.01284 0.01377 0.42% MultiFab::contains_nan() 20 0.009469 0.01081 0.01349 0.41% Castro::initialize_advance() 10 0.006603 0.01088 0.01337 0.41% VisMF::Write(FabArray) 2 0.008106 0.009096 0.01275 0.39% Amr::coarseTimeStep() 10 0.00358 0.007427 0.01217 0.37% FabArray::setDomainBndry() 41 0.008603 0.0108 0.01185 0.36% Amr::writePlotFile() 2 0.007042 0.01077 0.01184 0.36% Castro::initMFs() 1 0.006148 0.007858 0.01113 0.34% Castro::finalize_do_advance() 10 0.001285 0.005967 0.01034 0.32% Castro::construct_old_gravity_source() 10 0.008866 0.009479 0.01015 0.31% StateData::define() 4 0.005058 0.006342 0.009 0.28% Castro::construct_new_source() 50 0.006117 0.006423 0.006576 0.20% Gravity::get_old_grav_vector() 10 0.002248 0.002955 0.004625 0.14% Gravity::get_new_grav_vector() 11 0.003547 0.003941 0.004505 0.14% main() 1 0.001745 0.001945 0.002064 0.06% AmrLevel::FillPatch() 41 0.001191 0.001327 0.001445 0.04% Amr::timeStep() 10 0.00013 0.0001886 0.0004018 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002508 0.0002618 0.0002737 0.01% Castro::do_advance_ctu() 10 0.000151 0.0001712 0.0001833 0.01% Castro::clean_state() 62 0.0001384 0.0001555 0.0001752 0.01% StateDataPhysBCFunct::() 41 0.00011 0.0001195 0.0001497 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001082 0.0001179 0.0001267 0.00% Castro::do_old_sources() 10 8.426e-05 9.613e-05 0.0001107 0.00% FabArray::ParallelCopy() 41 8.261e-05 9.401e-05 0.0001046 0.00% Castro::Castro() 1 5.927e-05 7.403e-05 9.715e-05 0.00% Castro::construct_old_source() 50 6.388e-05 8.197e-05 9.436e-05 0.00% Amr::FinalizeInit() 1 4.448e-06 1.54e-05 8.987e-05 0.00% Castro::do_new_sources() 10 5.499e-05 6.599e-05 7.695e-05 0.00% FillPatchSingleLevel 41 6.745e-05 7.104e-05 7.487e-05 0.00% Castro::subcycle_advance_ctu() 10 4.451e-05 5.392e-05 7.318e-05 0.00% Amr::defBaseLevel() 1 3.352e-05 4.732e-05 6.623e-05 0.00% Castro::apply_source_to_state() 20 4.779e-05 5.777e-05 6.441e-05 0.00% Castro::construct_old_gravity() 10 3.212e-05 4.413e-05 5.367e-05 0.00% Castro::advance() 10 3.755e-05 4.121e-05 4.867e-05 0.00% Castro::construct_new_gravity() 10 2.907e-05 3.687e-05 4.31e-05 0.00% Castro::check_for_nan() 20 2.524e-05 2.787e-05 3.327e-05 0.00% Castro::expand_state() 10 1.772e-05 2.53e-05 3.143e-05 0.00% Castro::computeNewDt() 9 9.214e-06 1.222e-05 2.225e-05 0.00% Castro::post_timestep() 10 1.37e-05 1.735e-05 1.989e-05 0.00% AmrLevel::AmrLevel(dm) 1 6.583e-06 9.697e-06 1.737e-05 0.00% Castro::computeInitialDt() 2 5.769e-06 7.117e-06 8.432e-06 0.00% Amr::InitializeInit() 1 2.719e-06 3.843e-06 6.996e-06 0.00% Castro::post_init() 1 2.953e-06 3.484e-06 4.331e-06 0.00% Amr::init() 1 1.754e-06 2.554e-06 3.571e-06 0.00% Amr::initialInit() 1 1.227e-06 2.198e-06 3.14e-06 0.00% Other 260 0.01154 0.01729 0.02142 0.66% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.258 3.262 3.264 100.00% Amr::coarseTimeStep() 10 3.084 3.084 3.084 94.50% Amr::timeStep() 10 3.061 3.066 3.069 94.04% Castro::advance() 10 3.046 3.051 3.055 93.61% Castro::subcycle_advance_ctu() 10 2.977 2.981 2.993 91.69% Castro::do_advance_ctu() 10 2.977 2.981 2.993 91.69% Castro::construct_ctu_hydro_source() 10 2.183 2.19 2.193 67.21% Gravity::make_radial_gravity() 21 0.3034 0.3273 0.342 10.48% AmrLevel::FillPatch() 41 0.2204 0.2357 0.2526 7.74% Castro::construct_old_gravity() 10 0.192 0.2126 0.2242 6.87% Gravity::get_old_grav_vector() 10 0.1908 0.2119 0.2236 6.85% FillPatchIterator::Initialize 41 0.1857 0.2012 0.2115 6.48% Gravity::get_new_grav_vector() 11 0.2058 0.2066 0.2077 6.36% Castro::initialize_do_advance() 10 0.1739 0.1836 0.2019 6.19% Castro::construct_new_gravity() 10 0.1839 0.1842 0.1848 5.66% check_for_negative_density() 10 0.03471 0.1195 0.1825 5.59% Amr::init() 1 0.1631 0.1669 0.1689 5.18% FillPatchIterator::FillFromLevel0() 41 0.1318 0.1476 0.162 4.96% FillPatchSingleLevel 41 0.1316 0.1475 0.1619 4.96% Amr::initialInit() 1 0.1486 0.1524 0.1544 4.73% Castro::expand_state() 10 0.1168 0.127 0.1472 4.51% FabArray::ParallelCopy() 41 0.09665 0.1135 0.1279 3.92% Amr::InitializeInit() 1 0.05955 0.09751 0.1272 3.90% Amr::defBaseLevel() 1 0.05954 0.09751 0.1272 3.90% Castro::do_old_sources() 10 0.09783 0.1067 0.1141 3.50% Castro::clean_state() 62 0.1037 0.1045 0.106 3.25% Castro::initData() 1 0.03818 0.07573 0.1052 3.22% Castro::estTimeStep() 21 0.02798 0.05814 0.1009 3.09% amrex::Copy() 193 0.07831 0.08519 0.09686 2.97% Amr::FinalizeInit() 1 0.02619 0.05488 0.09442 2.89% FabArray::ParallelCopy_finish() 41 0.0528 0.07663 0.09425 2.89% FabArray::setVal() 143 0.06491 0.06829 0.07407 2.27% Castro::initialize_advance() 10 0.05893 0.06751 0.07142 2.19% Castro::computeInitialDt() 2 0.002484 0.03109 0.07074 2.17% Castro::do_new_sources() 10 0.06001 0.06264 0.06615 2.03% Castro::computeTemp() 63 0.06269 0.06446 0.06579 2.02% Castro::reset_internal_energy(MultiFab) 63 0.04419 0.0458 0.04714 1.44% Castro::reset_internal_energy(Fab) 1008 0.04394 0.04554 0.04689 1.44% FabArray::ParallelCopy_nowait() 41 0.03156 0.03678 0.04376 1.34% StateDataPhysBCFunct::() 41 0.0314 0.03391 0.03598 1.10% StateData::FillBoundary(geom) 41 0.03129 0.03379 0.03586 1.10% Castro::normalize_species() 62 0.03421 0.03443 0.03505 1.07% Castro::construct_new_source() 50 0.02858 0.02977 0.0321 0.98% Castro::finalize_do_advance() 10 0.01811 0.02305 0.02957 0.91% Gravity::interpolate_monopole_grav() 21 0.02465 0.02525 0.02668 0.82% Castro::construct_new_gravity_source() 10 0.02247 0.02335 0.02553 0.78% Castro::post_init() 1 0.02349 0.02362 0.02371 0.73% Amr::writePlotFile() 2 0.02268 0.02281 0.02293 0.70% Castro::Castro() 1 0.009118 0.01147 0.01589 0.49% Castro::post_timestep() 10 0.01398 0.01421 0.01481 0.45% Castro::apply_source_to_state() 20 0.01201 0.0129 0.01383 0.42% FabArray::Saxpy() 20 0.01196 0.01284 0.01377 0.42% Castro::check_for_nan() 20 0.009502 0.01084 0.01352 0.41% MultiFab::contains_nan() 20 0.009469 0.01081 0.01349 0.41% VisMF::Write(FabArray) 2 0.008106 0.009096 0.01275 0.39% FabArray::setDomainBndry() 41 0.008603 0.0108 0.01185 0.36% Castro::initMFs() 1 0.006148 0.007858 0.01113 0.34% Castro::construct_old_source() 50 0.00893 0.009561 0.01023 0.31% Castro::construct_old_gravity_source() 10 0.008866 0.009479 0.01015 0.31% Castro::computeNewDt() 9 0.009959 0.009989 0.01001 0.31% AmrLevel::AmrLevel(dm) 1 0.005065 0.006351 0.009018 0.28% StateData::define() 4 0.005058 0.006342 0.009 0.28% Other 260 0.01499 0.02511 0.03176 0.97% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 13 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 13 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8632 KiB 8643 KiB 8651 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6750 KiB 6758 KiB 6760 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7111 KiB 7120 KiB 7123 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4543 KiB 4548 KiB 4562 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 255 KiB 268 KiB 296 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 15 KiB 17 KiB 21 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2791 KiB 2799 KiB 2804 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 236 KiB 255 KiB 266 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 39 KiB 52 KiB 63 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2021 KiB 2023 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 80 KiB 81 KiB 81 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 74 KiB 83 KiB 87 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.06-22-gee36883035e7) finalized