Initializing AMReX (26.06-26-ge95d50b2b424)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.06-26-ge95d50b2b424) initialized Starting run at 05:17:51 UTC on 2026-06-26. Successfully read inputs file ... Castro git describe: 26.06-10-gfcd4fff5d AMReX git describe: 26.06-26-ge95d50b2b Microphysics git describe: 26.06-9-g2914a100 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013461915 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.320838771 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.322002736 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.316166138 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.315972588 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.349268365 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.287358521 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.279413728 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.276432648 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.276507 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.276968636 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007853895 seconds Ending run at 05:17:54 UTC on 2026-06-26. Run time = 3.202597314 Run time without initialization = 3.031289018 Average number of zones advanced per microsecond: 0.865 Average number of zones advanced per microsecond per rank: 0.108 TinyProfiler total time across processes [min...avg...max]: 3.2017 ... 3.2020 ... 3.2027 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 1.9534 2.0436 2.1245 66.34% Gravity::make_radial_gravity() 21 0.2842 0.2914 0.3105 9.69% check_for_negative_density() 10 0.03364 0.1155 0.2118 6.61% Castro::initData() 1 0.03927 0.07219 0.1102 3.44% Castro::estTimeStep() 21 0.02543 0.07108 0.1048 3.27% amrex::Copy() 193 0.0601 0.07847 0.08426 2.63% FabArray::ParallelCopy_finish() 41 0.03513 0.05739 0.08223 2.57% FabArray::setVal() 143 0.05312 0.06533 0.07109 2.22% FillPatchIterator::Initialize 41 0.03675 0.04046 0.04777 1.49% Castro::reset_internal_energy(Fab) 1008 0.04035 0.04508 0.04745 1.48% Castro::normalize_species() 62 0.03438 0.03664 0.04064 1.27% FabArray::ParallelCopy_nowait() 41 0.02703 0.0358 0.03792 1.18% StateData::FillBoundary(geom) 41 0.02968 0.03277 0.03534 1.10% Castro::initialize_do_advance() 10 0.01493 0.02126 0.03222 1.01% Gravity::interpolate_monopole_grav() 21 0.02471 0.02519 0.02674 0.83% Castro::construct_new_gravity_source() 10 0.02124 0.02328 0.02563 0.80% Castro::computeTemp() 63 0.01691 0.01864 0.01925 0.60% FabArray::Saxpy() 20 0.01092 0.01268 0.01409 0.44% Amr::writePlotFile() 2 0.00696 0.01093 0.01348 0.42% Castro::initialize_advance() 10 0.004992 0.01009 0.01274 0.40% FabArray::setDomainBndry() 41 0.007667 0.01041 0.01186 0.37% VisMF::Write(FabArray) 2 0.006922 0.008227 0.01163 0.36% MultiFab::contains_nan() 20 0.009293 0.01013 0.01095 0.34% Castro::construct_old_gravity_source() 10 0.007198 0.009815 0.01078 0.34% Amr::coarseTimeStep() 10 0.003393 0.00749 0.01065 0.33% Castro::finalize_do_advance() 10 0.0009929 0.005521 0.01047 0.33% Castro::initMFs() 1 0.006059 0.006689 0.007139 0.22% Castro::enforce_min_density() 62 0.006042 0.006328 0.006886 0.22% Castro::construct_new_source() 50 0.005634 0.006204 0.006422 0.20% Gravity::get_new_grav_vector() 11 0.002821 0.003632 0.004216 0.13% Gravity::get_old_grav_vector() 10 0.001587 0.002538 0.003061 0.10% main() 1 0.001733 0.001891 0.001982 0.06% AmrLevel::FillPatch() 41 0.0007895 0.000996 0.00108 0.03% Amr::timeStep() 10 0.0001298 0.0001821 0.0004221 0.01% Castro::reset_internal_energy(MultiFab) 63 0.000246 0.0002548 0.0002663 0.01% Castro::do_advance_ctu() 10 0.0001446 0.0001668 0.0002092 0.01% Castro::clean_state() 62 0.0001359 0.0001471 0.0001575 0.00% FillPatchIterator::FillFromLevel0() 41 9.784e-05 0.0001163 0.0001284 0.00% StateDataPhysBCFunct::() 41 8.839e-05 0.0001021 0.0001212 0.00% Castro::do_old_sources() 10 7.068e-05 9.101e-05 0.000106 0.00% Castro::construct_old_source() 50 5.47e-05 7.962e-05 9.681e-05 0.00% FabArray::ParallelCopy() 41 6.81e-05 8.445e-05 9.373e-05 0.00% Amr::FinalizeInit() 1 3.639e-06 1.442e-05 8.659e-05 0.00% FillPatchSingleLevel 41 6.641e-05 7.207e-05 8.064e-05 0.00% Castro::Castro() 1 5.866e-05 7.186e-05 7.934e-05 0.00% Castro::do_new_sources() 10 5.205e-05 6.092e-05 6.873e-05 0.00% Castro::subcycle_advance_ctu() 10 3.945e-05 5.226e-05 6.539e-05 0.00% Castro::apply_source_to_state() 20 5.132e-05 5.583e-05 5.896e-05 0.00% Castro::construct_old_gravity() 10 3.811e-05 4.53e-05 5.274e-05 0.00% Castro::advance() 10 3.338e-05 4.083e-05 4.809e-05 0.00% Amr::defBaseLevel() 1 3.558e-05 3.934e-05 4.282e-05 0.00% Castro::construct_new_gravity() 10 3.012e-05 3.472e-05 4.079e-05 0.00% Castro::check_for_nan() 20 2.58e-05 2.687e-05 2.902e-05 0.00% Castro::expand_state() 10 1.936e-05 2.131e-05 2.41e-05 0.00% Castro::post_timestep() 10 1.367e-05 1.608e-05 2.192e-05 0.00% Castro::computeNewDt() 9 9.362e-06 1.053e-05 1.425e-05 0.00% Castro::computeInitialDt() 2 6.324e-06 7.005e-06 8.951e-06 0.00% Amr::InitializeInit() 1 2.763e-06 3.486e-06 6.871e-06 0.00% Castro::post_init() 1 2.16e-06 3.078e-06 4.181e-06 0.00% Amr::init() 1 1.982e-06 2.362e-06 2.886e-06 0.00% Amr::initialInit() 1 1.439e-06 1.872e-06 2.562e-06 0.00% Other 203 0.01034 0.01259 0.01464 0.46% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.202 3.202 3.203 100.00% Amr::coarseTimeStep() 10 3.022 3.022 3.022 94.34% Amr::timeStep() 10 2.999 3.003 3.007 93.88% Castro::advance() 10 2.983 2.988 2.993 93.44% Castro::subcycle_advance_ctu() 10 2.912 2.919 2.935 91.66% Castro::do_advance_ctu() 10 2.912 2.919 2.935 91.65% Castro::construct_ctu_hydro_source() 10 2.176 2.178 2.184 68.20% Gravity::make_radial_gravity() 21 0.302 0.3089 0.3237 10.11% AmrLevel::FillPatch() 41 0.1994 0.2091 0.2162 6.75% check_for_negative_density() 10 0.03364 0.1155 0.2118 6.61% Gravity::get_new_grav_vector() 11 0.205 0.2065 0.2082 6.50% Castro::construct_old_gravity() 10 0.1841 0.1882 0.1988 6.21% Gravity::get_old_grav_vector() 10 0.1832 0.1874 0.1982 6.19% FillPatchIterator::Initialize 41 0.1658 0.1773 0.1872 5.85% Castro::construct_new_gravity() 10 0.1839 0.185 0.1862 5.81% Castro::initialize_do_advance() 10 0.1664 0.1708 0.1749 5.46% Amr::init() 1 0.1698 0.1703 0.171 5.34% Amr::initialInit() 1 0.156 0.1566 0.1573 4.91% FillPatchIterator::FillFromLevel0() 41 0.1079 0.1264 0.1394 4.35% FillPatchSingleLevel 41 0.1077 0.1263 0.1393 4.35% Amr::InitializeInit() 1 0.05993 0.09242 0.1311 4.09% Amr::defBaseLevel() 1 0.05992 0.09241 0.1311 4.09% Castro::expand_state() 10 0.1064 0.1164 0.124 3.87% Castro::initData() 1 0.04296 0.07585 0.1138 3.55% Castro::clean_state() 62 0.09911 0.1062 0.1113 3.48% FabArray::ParallelCopy() 41 0.07279 0.09337 0.1094 3.42% Castro::estTimeStep() 21 0.02543 0.07108 0.1048 3.27% Castro::do_old_sources() 10 0.0926 0.09473 0.09677 3.02% Amr::FinalizeInit() 1 0.02536 0.06413 0.09621 3.00% amrex::Copy() 193 0.0601 0.07847 0.08426 2.63% FabArray::ParallelCopy_finish() 41 0.03513 0.05739 0.08223 2.57% Castro::computeInitialDt() 2 0.002526 0.04133 0.07328 2.29% FabArray::setVal() 143 0.05312 0.06533 0.07109 2.22% Castro::initialize_advance() 10 0.05254 0.06611 0.06907 2.16% Castro::do_new_sources() 10 0.05569 0.06142 0.06748 2.11% Castro::computeTemp() 63 0.05751 0.06397 0.06694 2.09% Castro::reset_internal_energy(MultiFab) 63 0.0406 0.04534 0.04771 1.49% Castro::reset_internal_energy(Fab) 1008 0.04035 0.04508 0.04745 1.48% Castro::normalize_species() 62 0.03438 0.03664 0.04064 1.27% FabArray::ParallelCopy_nowait() 41 0.02713 0.03589 0.038 1.19% StateDataPhysBCFunct::() 41 0.02978 0.03287 0.03545 1.11% StateData::FillBoundary(geom) 41 0.02968 0.03277 0.03534 1.10% Castro::finalize_do_advance() 10 0.01803 0.02514 0.03502 1.09% Castro::construct_new_source() 50 0.02688 0.02948 0.03183 0.99% Gravity::interpolate_monopole_grav() 21 0.02471 0.02519 0.02674 0.83% Castro::construct_new_gravity_source() 10 0.02124 0.02328 0.02563 0.80% Castro::post_init() 1 0.0224 0.02265 0.02277 0.71% Amr::writePlotFile() 2 0.02159 0.0217 0.02201 0.69% Castro::post_timestep() 10 0.01377 0.01466 0.01577 0.49% Castro::apply_source_to_state() 20 0.01097 0.01274 0.01415 0.44% FabArray::Saxpy() 20 0.01092 0.01268 0.01409 0.44% FabArray::setDomainBndry() 41 0.007667 0.01041 0.01186 0.37% VisMF::Write(FabArray) 2 0.006922 0.008227 0.01163 0.36% Castro::Castro() 1 0.009222 0.01041 0.01121 0.35% Castro::check_for_nan() 20 0.00932 0.01016 0.01098 0.34% MultiFab::contains_nan() 20 0.009293 0.01013 0.01095 0.34% Castro::construct_old_source() 50 0.007253 0.009895 0.01087 0.34% Castro::construct_old_gravity_source() 10 0.007198 0.009815 0.01078 0.34% Castro::computeNewDt() 9 0.01014 0.01015 0.01016 0.32% Castro::initMFs() 1 0.006059 0.006689 0.007139 0.22% Castro::enforce_min_density() 62 0.006042 0.006328 0.006886 0.22% Other 203 0.0192 0.02279 0.02634 0.82% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 3 B 6 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8641 KiB 8657 KiB 8661 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6735 KiB 6745 KiB 6750 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7116 KiB 7128 KiB 7130 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4526 KiB 4537 KiB 4559 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 228 KiB 244 KiB 253 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 12 KiB 16 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2784 KiB 2792 KiB 2797 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 240 KiB 245 KiB 257 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 32 KiB 44 KiB 50 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2023 KiB 2026 KiB 2027 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 82 KiB 82 KiB 83 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 73 KiB 75 KiB 79 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.06-26-ge95d50b2b424) finalized