Initializing AMReX (26.06-30-g5fbc49bce6cc)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.06-30-g5fbc49bce6cc) initialized Starting run at 05:35:35 UTC on 2026-06-29. Successfully read inputs file ... Castro git describe: 26.06-10-gfcd4fff5d AMReX git describe: 26.06-30-g5fbc49bce Microphysics git describe: 26.06-16-g87c1833b reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013509313 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.328132736 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.324824696 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.335039365 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.323967809 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.358259647 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.283932397 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.279793979 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.280795975 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.275697144 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.275738364 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007701496 seconds Ending run at 05:35:39 UTC on 2026-06-29. Run time = 3.258039395 Run time without initialization = 3.076478993 Average number of zones advanced per microsecond: 0.852 Average number of zones advanced per microsecond per rank: 0.107 TinyProfiler total time across processes [min...avg...max]: 3.2570 ... 3.2576 ... 3.2581 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 1.9316 2.0476 2.1482 65.93% Gravity::make_radial_gravity() 21 0.2941 0.302 0.3213 9.86% check_for_negative_density() 10 0.02699 0.1323 0.2524 7.75% Castro::initData() 1 0.03478 0.07168 0.1193 3.66% Castro::estTimeStep() 21 0.02657 0.07844 0.1182 3.63% FabArray::ParallelCopy_finish() 41 0.05278 0.06963 0.1047 3.21% amrex::Copy() 193 0.06041 0.08288 0.09451 2.90% FabArray::setVal() 143 0.05315 0.0667 0.07469 2.29% FillPatchIterator::Initialize 41 0.03987 0.04208 0.04913 1.51% Castro::reset_internal_energy(Fab) 1008 0.04451 0.04572 0.04728 1.45% FabArray::ParallelCopy_nowait() 41 0.0257 0.03575 0.03885 1.19% Castro::normalize_species() 62 0.03367 0.03456 0.03676 1.13% StateData::FillBoundary(geom) 41 0.02951 0.03343 0.03663 1.12% Castro::initialize_do_advance() 10 0.01866 0.02167 0.03362 1.03% Gravity::interpolate_monopole_grav() 21 0.0253 0.0259 0.02761 0.85% Castro::construct_new_gravity_source() 10 0.0217 0.02222 0.0231 0.71% Castro::computeTemp() 63 0.01835 0.01867 0.01907 0.59% FabArray::Saxpy() 20 0.01042 0.0122 0.01307 0.40% Castro::initialize_advance() 10 0.005309 0.01024 0.01273 0.39% VisMF::Write(FabArray) 2 0.007491 0.008339 0.01233 0.38% FabArray::setDomainBndry() 41 0.00781 0.01075 0.01177 0.36% MultiFab::contains_nan() 20 0.009603 0.01041 0.01176 0.36% Amr::writePlotFile() 2 0.006966 0.01015 0.01113 0.34% Castro::finalize_do_advance() 10 0.004002 0.005566 0.0103 0.32% Castro::construct_old_gravity_source() 10 0.006643 0.008934 0.009706 0.30% Castro::initMFs() 1 0.006386 0.006811 0.008299 0.25% Amr::coarseTimeStep() 10 0.002456 0.006584 0.007844 0.24% Castro::enforce_min_density() 62 0.006056 0.006307 0.00652 0.20% Castro::construct_new_source() 50 0.005464 0.006209 0.006431 0.20% Gravity::get_new_grav_vector() 11 0.002765 0.003747 0.004132 0.13% Gravity::get_old_grav_vector() 10 0.001723 0.002542 0.00303 0.09% main() 1 0.001732 0.001923 0.00217 0.07% AmrLevel::FillPatch() 41 0.0008387 0.001059 0.001179 0.04% Amr::timeStep() 10 0.0001362 0.0001844 0.0003768 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002378 0.0002479 0.0002609 0.01% Castro::clean_state() 62 0.0001331 0.0001518 0.000183 0.01% Castro::do_advance_ctu() 10 0.0001439 0.0001589 0.0001712 0.01% StateDataPhysBCFunct::() 41 9.288e-05 0.0001054 0.0001447 0.00% Castro::Castro() 1 5.834e-05 9.137e-05 0.0001297 0.00% FillPatchIterator::FillFromLevel0() 41 0.000105 0.0001129 0.0001243 0.00% Castro::do_old_sources() 10 7.343e-05 9.089e-05 9.76e-05 0.00% FabArray::ParallelCopy() 41 7.696e-05 8.934e-05 9.717e-05 0.00% Castro::construct_old_source() 50 5.315e-05 7.234e-05 8.46e-05 0.00% FillPatchSingleLevel 41 6.333e-05 6.583e-05 6.868e-05 0.00% Castro::do_new_sources() 10 5.347e-05 6.107e-05 6.68e-05 0.00% Amr::FinalizeInit() 1 3.818e-06 1.224e-05 6.345e-05 0.00% Castro::apply_source_to_state() 20 4.686e-05 5.429e-05 6.158e-05 0.00% Castro::subcycle_advance_ctu() 10 4.308e-05 5.136e-05 5.74e-05 0.00% Castro::construct_new_gravity() 10 3.281e-05 3.757e-05 5.62e-05 0.00% Castro::advance() 10 3.579e-05 4.064e-05 5.105e-05 0.00% Amr::defBaseLevel() 1 3.384e-05 3.856e-05 4.956e-05 0.00% Castro::construct_old_gravity() 10 3.722e-05 4.28e-05 4.804e-05 0.00% Castro::check_for_nan() 20 2.574e-05 2.872e-05 3.351e-05 0.00% Castro::expand_state() 10 1.87e-05 2.199e-05 2.455e-05 0.00% Castro::post_timestep() 10 1.47e-05 1.683e-05 1.932e-05 0.00% Amr::InitializeInit() 1 2.311e-06 4.519e-06 1.244e-05 0.00% Castro::computeNewDt() 9 9.449e-06 1.019e-05 1.088e-05 0.00% Castro::computeInitialDt() 2 6.16e-06 7.34e-06 9.974e-06 0.00% Castro::post_init() 1 2.323e-06 3.13e-06 3.527e-06 0.00% Amr::init() 1 2.02e-06 2.322e-06 2.793e-06 0.00% Amr::initialInit() 1 1.4e-06 1.707e-06 2.006e-06 0.00% Other 203 0.009345 0.01274 0.01476 0.45% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.257 3.258 3.258 100.00% Amr::coarseTimeStep() 10 3.067 3.067 3.067 94.13% Amr::timeStep() 10 3.048 3.049 3.053 93.71% Castro::advance() 10 3.033 3.035 3.039 93.28% Castro::subcycle_advance_ctu() 10 2.961 2.966 2.982 91.52% Castro::do_advance_ctu() 10 2.961 2.966 2.982 91.52% Castro::construct_ctu_hydro_source() 10 2.195 2.199 2.203 67.62% Gravity::make_radial_gravity() 21 0.3109 0.3198 0.3342 10.26% check_for_negative_density() 10 0.02699 0.1323 0.2524 7.75% AmrLevel::FillPatch() 41 0.2047 0.2238 0.2381 7.31% Castro::construct_old_gravity() 10 0.1966 0.2035 0.2142 6.57% Gravity::get_old_grav_vector() 10 0.1958 0.2028 0.2136 6.55% FillPatchIterator::Initialize 41 0.1758 0.1921 0.2109 6.47% Gravity::get_new_grav_vector() 11 0.2056 0.2069 0.208 6.38% Castro::construct_new_gravity() 10 0.1841 0.1848 0.1853 5.69% Amr::init() 1 0.1801 0.1809 0.1813 5.56% Castro::initialize_do_advance() 10 0.1641 0.1714 0.1779 5.46% Amr::initialInit() 1 0.1664 0.1676 0.1681 5.16% FillPatchIterator::FillFromLevel0() 41 0.1198 0.1393 0.1603 4.92% FillPatchSingleLevel 41 0.1197 0.1392 0.1602 4.92% Amr::InitializeInit() 1 0.0552 0.09259 0.141 4.33% Amr::defBaseLevel() 1 0.05519 0.09259 0.141 4.33% FabArray::ParallelCopy() 41 0.08676 0.1056 0.1306 4.01% Castro::expand_state() 10 0.1007 0.1157 0.1256 3.86% Castro::initData() 1 0.03869 0.07551 0.1231 3.78% Castro::estTimeStep() 21 0.02657 0.07844 0.1182 3.63% Amr::FinalizeInit() 1 0.02597 0.07498 0.1128 3.46% Castro::do_old_sources() 10 0.09841 0.1059 0.1102 3.38% Castro::clean_state() 62 0.1025 0.1048 0.1091 3.35% FabArray::ParallelCopy_finish() 41 0.05278 0.06963 0.1047 3.21% amrex::Copy() 193 0.06041 0.08288 0.09451 2.90% Castro::computeInitialDt() 2 0.002415 0.05145 0.08922 2.74% FabArray::setVal() 143 0.05315 0.0667 0.07469 2.29% Castro::initialize_advance() 10 0.05155 0.06554 0.07011 2.15% Castro::computeTemp() 63 0.06328 0.06464 0.06661 2.04% Castro::do_new_sources() 10 0.05615 0.05991 0.064 1.96% Castro::reset_internal_energy(MultiFab) 63 0.04475 0.04597 0.04754 1.46% Castro::reset_internal_energy(Fab) 1008 0.04451 0.04572 0.04728 1.45% FabArray::ParallelCopy_nowait() 41 0.0258 0.03585 0.03893 1.19% Castro::normalize_species() 62 0.03367 0.03456 0.03676 1.13% StateDataPhysBCFunct::() 41 0.0296 0.03354 0.03674 1.13% StateData::FillBoundary(geom) 41 0.02951 0.03343 0.03663 1.12% Castro::finalize_do_advance() 10 0.01695 0.02273 0.02968 0.91% Castro::construct_new_source() 50 0.02716 0.02843 0.02953 0.91% Gravity::interpolate_monopole_grav() 21 0.0253 0.0259 0.02761 0.85% Castro::post_init() 1 0.02272 0.02327 0.02348 0.72% Castro::construct_new_gravity_source() 10 0.0217 0.02222 0.0231 0.71% Amr::writePlotFile() 2 0.021 0.0211 0.02148 0.66% Castro::post_timestep() 10 0.01376 0.01414 0.01474 0.45% Castro::apply_source_to_state() 20 0.01047 0.01225 0.01313 0.40% FabArray::Saxpy() 20 0.01042 0.0122 0.01307 0.40% VisMF::Write(FabArray) 2 0.007491 0.008339 0.01233 0.38% Castro::check_for_nan() 20 0.009637 0.01043 0.01179 0.36% FabArray::setDomainBndry() 41 0.00781 0.01075 0.01177 0.36% MultiFab::contains_nan() 20 0.009603 0.01041 0.01176 0.36% Castro::Castro() 1 0.01024 0.01077 0.01161 0.36% Castro::computeNewDt() 9 0.009836 0.00985 0.009863 0.30% Castro::construct_old_source() 50 0.006696 0.009006 0.009781 0.30% Castro::construct_old_gravity_source() 10 0.006643 0.008934 0.009706 0.30% Castro::initMFs() 1 0.006386 0.006811 0.008299 0.25% Castro::enforce_min_density() 62 0.006056 0.006307 0.00652 0.20% Other 203 0.01822 0.02323 0.0267 0.82% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 13 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 4 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 13 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8647 KiB 8658 KiB 8661 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6727 KiB 6730 KiB 6730 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7121 KiB 7129 KiB 7131 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4526 KiB 4533 KiB 4549 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 230 KiB 251 KiB 270 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 14 KiB 15 KiB 19 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2786 KiB 2788 KiB 2793 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 243 KiB 249 KiB 261 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 33 KiB 46 KiB 55 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2024 KiB 2026 KiB 2027 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 80 KiB 81 KiB 81 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 77 KiB 79 KiB 83 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.06-30-g5fbc49bce6cc) finalized