Initializing AMReX (26.07-20-g950d60e48284)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.07-20-g950d60e48284) initialized Starting run at 05:17:35 UTC on 2026-07-07. Successfully read inputs file ... Castro git describe: 26.07 AMReX git describe: 26.07-20-g950d60e48 Microphysics git describe: 26.07 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014225375 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.31929473 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.32662833 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.331640612 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.326345076 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.376956951 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.28490332 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.277990891 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.27849021 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.278314668 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.277622149 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.006944782 seconds Ending run at 05:17:38 UTC on 2026-07-07. Run time = 3.275617886 Run time without initialization = 3.087733218 Average number of zones advanced per microsecond: 0.849 Average number of zones advanced per microsecond per rank: 0.106 TinyProfiler total time across processes [min...avg...max]: 3.2709 ... 3.2737 ... 3.2756 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0140 2.0726 2.1779 66.49% Gravity::make_radial_gravity() 21 0.2856 0.2981 0.3063 9.35% check_for_negative_density() 10 0.0142 0.1232 0.1858 5.67% Castro::initData() 1 0.03441 0.07488 0.1189 3.63% Castro::estTimeStep() 21 0.03281 0.07303 0.1171 3.58% amrex::Copy() 193 0.07612 0.08353 0.09176 2.80% FabArray::ParallelCopy_finish() 41 0.0569 0.06693 0.08894 2.72% FabArray::setVal() 143 0.06377 0.06696 0.07153 2.18% Castro::reset_internal_energy(Fab) 1008 0.04 0.0454 0.04834 1.48% FillPatchIterator::Initialize 41 0.03579 0.0406 0.04637 1.42% StateData::FillBoundary(geom) 41 0.03156 0.03478 0.04198 1.28% FabArray::ParallelCopy_nowait() 41 0.03334 0.03644 0.03854 1.18% Castro::normalize_species() 62 0.03417 0.03523 0.03597 1.10% Castro::initialize_do_advance() 10 0.01589 0.01969 0.02859 0.87% Gravity::interpolate_monopole_grav() 21 0.02495 0.02562 0.02731 0.83% Castro::construct_new_gravity_source() 10 0.02201 0.02337 0.02483 0.76% Castro::computeTemp() 63 0.01705 0.01851 0.01938 0.59% FabArray::Saxpy() 20 0.01237 0.0131 0.01373 0.42% Castro::initialize_advance() 10 0.006045 0.01039 0.01307 0.40% FabArray::setDomainBndry() 41 0.009434 0.01106 0.01192 0.36% Amr::coarseTimeStep() 10 0.005963 0.008832 0.01178 0.36% MultiFab::contains_nan() 20 0.009342 0.01044 0.01145 0.35% VisMF::Write(FabArray) 2 0.008203 0.008713 0.01097 0.33% Amr::writePlotFile() 2 0.00726 0.009916 0.0105 0.32% Castro::construct_old_gravity_source() 10 0.008691 0.009763 0.01034 0.32% Castro::initMFs() 1 0.00622 0.007726 0.009793 0.30% StateData::define() 4 0.005163 0.006403 0.008227 0.25% Castro::finalize_do_advance() 10 0.001278 0.004385 0.007855 0.24% Castro::construct_new_source() 50 0.006194 0.006324 0.006664 0.20% Gravity::get_new_grav_vector() 11 0.003101 0.003952 0.004452 0.14% Gravity::get_old_grav_vector() 10 0.001891 0.002693 0.003255 0.10% main() 1 0.001648 0.00186 0.002116 0.06% AmrLevel::FillPatch() 41 0.001166 0.001318 0.001835 0.06% Amr::timeStep() 10 0.000136 0.0002039 0.0004731 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002501 0.0002554 0.0002623 0.01% Castro::do_advance_ctu() 10 0.0001369 0.0001677 0.0002013 0.01% Castro::clean_state() 62 0.0001355 0.0001476 0.0001559 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001019 0.0001095 0.0001307 0.00% StateDataPhysBCFunct::() 41 9.586e-05 0.0001059 0.0001201 0.00% Castro::do_old_sources() 10 7.316e-05 9.32e-05 0.0001092 0.00% FabArray::ParallelCopy() 41 8.252e-05 8.991e-05 0.0001014 0.00% Castro::construct_old_source() 50 5.627e-05 7.923e-05 9.935e-05 0.00% Amr::FinalizeInit() 1 3.835e-06 1.621e-05 9.77e-05 0.00% Castro::Castro() 1 5.668e-05 6.803e-05 9.471e-05 0.00% FillPatchSingleLevel 41 6.54e-05 7.204e-05 8.161e-05 0.00% Castro::do_new_sources() 10 5.013e-05 6.185e-05 7.071e-05 0.00% Castro::apply_source_to_state() 20 4.812e-05 5.589e-05 6.495e-05 0.00% Castro::construct_old_gravity() 10 3.173e-05 4.268e-05 6.251e-05 0.00% Castro::subcycle_advance_ctu() 10 4.404e-05 5.32e-05 6.226e-05 0.00% Amr::defBaseLevel() 1 3.685e-05 4.333e-05 4.983e-05 0.00% Castro::advance() 10 3.223e-05 3.911e-05 4.484e-05 0.00% Castro::construct_new_gravity() 10 2.934e-05 3.568e-05 4.369e-05 0.00% Castro::check_for_nan() 20 2.302e-05 2.621e-05 3e-05 0.00% Castro::expand_state() 10 1.94e-05 2.322e-05 2.744e-05 0.00% Castro::computeNewDt() 9 9.448e-06 1.245e-05 2.611e-05 0.00% Castro::post_timestep() 10 1.555e-05 1.854e-05 2.301e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.164e-05 1.472e-05 1.818e-05 0.00% Castro::post_init() 1 2.861e-06 5.47e-06 1.282e-05 0.00% Castro::computeInitialDt() 2 5.579e-06 7.2e-06 9.072e-06 0.00% Amr::InitializeInit() 1 2.758e-06 3.915e-06 7.923e-06 0.00% Amr::init() 1 1.775e-06 2.643e-06 3.618e-06 0.00% Amr::initialInit() 1 1.071e-06 1.635e-06 2.208e-06 0.00% Other 260 0.01152 0.01617 0.01986 0.61% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.271 3.274 3.276 100.00% Amr::coarseTimeStep() 10 3.079 3.079 3.079 93.99% Amr::timeStep() 10 3.056 3.059 3.061 93.46% Castro::advance() 10 3.04 3.044 3.047 93.01% Castro::subcycle_advance_ctu() 10 2.97 2.974 2.984 91.09% Castro::do_advance_ctu() 10 2.97 2.974 2.984 91.09% Castro::construct_ctu_hydro_source() 10 2.211 2.215 2.219 67.75% Gravity::make_radial_gravity() 21 0.3034 0.3162 0.323 9.86% AmrLevel::FillPatch() 41 0.2127 0.2235 0.2412 7.36% Gravity::get_new_grav_vector() 11 0.2081 0.2096 0.2106 6.43% FillPatchIterator::Initialize 41 0.1822 0.1903 0.2046 6.25% Castro::construct_old_gravity() 10 0.1861 0.1985 0.2039 6.22% Gravity::get_old_grav_vector() 10 0.1853 0.1978 0.2032 6.20% Amr::init() 1 0.183 0.1856 0.1877 5.73% Castro::construct_new_gravity() 10 0.1837 0.1846 0.186 5.68% check_for_negative_density() 10 0.0142 0.1232 0.1858 5.67% Castro::initialize_do_advance() 10 0.1626 0.1695 0.1809 5.52% Amr::initialInit() 1 0.1683 0.171 0.1731 5.28% FillPatchIterator::FillFromLevel0() 41 0.1276 0.1386 0.1558 4.76% FillPatchSingleLevel 41 0.1275 0.1385 0.1557 4.75% Amr::InitializeInit() 1 0.05702 0.09865 0.1432 4.37% Amr::defBaseLevel() 1 0.05702 0.09865 0.1432 4.37% Castro::expand_state() 10 0.1057 0.1159 0.1284 3.92% Castro::initData() 1 0.03783 0.07832 0.1227 3.75% FabArray::ParallelCopy() 41 0.09551 0.1036 0.1225 3.74% Castro::estTimeStep() 21 0.03281 0.07303 0.1171 3.58% Amr::FinalizeInit() 1 0.02934 0.07238 0.116 3.54% Castro::do_old_sources() 10 0.09568 0.1057 0.1103 3.37% Castro::clean_state() 62 0.09796 0.105 0.1095 3.34% amrex::Copy() 193 0.07612 0.08353 0.09176 2.80% Castro::computeInitialDt() 2 0.002666 0.04587 0.08957 2.73% FabArray::ParallelCopy_finish() 41 0.0569 0.06693 0.08894 2.72% Castro::initialize_advance() 10 0.05737 0.06677 0.07175 2.19% FabArray::setVal() 143 0.06377 0.06696 0.07153 2.18% Castro::computeTemp() 63 0.05731 0.06416 0.06796 2.07% Castro::do_new_sources() 10 0.05966 0.06266 0.06682 2.04% Castro::reset_internal_energy(MultiFab) 63 0.04026 0.04565 0.04859 1.48% Castro::reset_internal_energy(Fab) 1008 0.04 0.0454 0.04834 1.48% StateDataPhysBCFunct::() 41 0.03168 0.03488 0.0421 1.29% StateData::FillBoundary(geom) 41 0.03156 0.03478 0.04198 1.28% FabArray::ParallelCopy_nowait() 41 0.03345 0.03654 0.03864 1.18% Castro::normalize_species() 62 0.03417 0.03523 0.03597 1.10% Castro::construct_new_source() 50 0.02827 0.0297 0.0315 0.96% Castro::finalize_do_advance() 10 0.01636 0.02139 0.02823 0.86% Gravity::interpolate_monopole_grav() 21 0.02495 0.02562 0.02731 0.83% Castro::post_init() 1 0.02619 0.02627 0.02646 0.81% Castro::construct_new_gravity_source() 10 0.02201 0.02337 0.02483 0.76% Amr::writePlotFile() 2 0.02146 0.02163 0.02176 0.66% Castro::post_timestep() 10 0.01296 0.01442 0.01579 0.48% Castro::Castro() 1 0.009213 0.01118 0.0138 0.42% Castro::apply_source_to_state() 20 0.01242 0.01315 0.0138 0.42% FabArray::Saxpy() 20 0.01237 0.0131 0.01373 0.42% FabArray::setDomainBndry() 41 0.009434 0.01106 0.01192 0.36% Castro::check_for_nan() 20 0.009371 0.01047 0.01147 0.35% MultiFab::contains_nan() 20 0.009342 0.01044 0.01145 0.35% VisMF::Write(FabArray) 2 0.008203 0.008713 0.01097 0.33% Castro::construct_old_source() 50 0.008747 0.009842 0.01041 0.32% Castro::construct_old_gravity_source() 10 0.008691 0.009763 0.01034 0.32% Castro::computeNewDt() 9 0.01016 0.01017 0.01018 0.31% Castro::initMFs() 1 0.00622 0.007726 0.009793 0.30% AmrLevel::AmrLevel(dm) 1 0.005174 0.006418 0.008245 0.25% StateData::define() 4 0.005163 0.006403 0.008227 0.25% Other 260 0.01511 0.02314 0.02961 0.90% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 13 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 13 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8632 KiB 8645 KiB 8653 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6707 KiB 6717 KiB 6721 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7109 KiB 7121 KiB 7124 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4515 KiB 4522 KiB 4537 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 238 KiB 249 KiB 272 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 15 KiB 16 KiB 19 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2774 KiB 2782 KiB 2786 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 235 KiB 245 KiB 251 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 38 KiB 45 KiB 55 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2021 KiB 2024 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 81 KiB 82 KiB 82 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 72 KiB 77 KiB 79 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.07-20-g950d60e48284) finalized