Initializing AMReX (26.07-26-g4cbe41a72438)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.07-26-g4cbe41a72438) initialized Starting run at 05:35:52 UTC on 2026-07-09. Successfully read inputs file ... Castro git describe: 26.07 AMReX git describe: 26.07-26-g4cbe41a72 Microphysics git describe: 26.07 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014301192 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.322634162 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.323594509 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.316106731 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.314296138 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.349800372 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.282561701 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.278990073 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.280234812 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.277598586 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.279980101 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.006824034 seconds Ending run at 05:35:55 UTC on 2026-07-09. Run time = 3.265853629 Run time without initialization = 3.035090348 Average number of zones advanced per microsecond: 0.864 Average number of zones advanced per microsecond per rank: 0.108 TinyProfiler total time across processes [min...avg...max]: 3.2623 ... 3.2641 ... 3.2659 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 1.9865 2.0358 2.1255 65.08% Gravity::make_radial_gravity() 21 0.2884 0.3071 0.3204 9.81% check_for_negative_density() 10 0.02792 0.1205 0.1728 5.29% Castro::initData() 1 0.03445 0.08031 0.1584 4.85% Castro::estTimeStep() 21 0.031 0.1115 0.1569 4.81% amrex::Copy() 193 0.06601 0.07734 0.0934 2.86% FabArray::ParallelCopy_finish() 41 0.04251 0.06562 0.08274 2.53% FabArray::setVal() 143 0.06098 0.06477 0.07216 2.21% Castro::reset_internal_energy(Fab) 1008 0.04445 0.04638 0.05063 1.55% FillPatchIterator::Initialize 41 0.03658 0.04012 0.04565 1.40% FabArray::ParallelCopy_nowait() 41 0.02945 0.03332 0.03682 1.13% StateData::FillBoundary(geom) 41 0.03134 0.03336 0.03552 1.09% Castro::normalize_species() 62 0.03381 0.03469 0.03506 1.07% Castro::initialize_do_advance() 10 0.01536 0.01913 0.02899 0.89% Gravity::interpolate_monopole_grav() 21 0.02525 0.02575 0.02752 0.84% Castro::construct_new_gravity_source() 10 0.02054 0.02173 0.02307 0.71% Castro::computeTemp() 63 0.0182 0.01906 0.02194 0.67% MultiFab::contains_nan() 20 0.009089 0.0103 0.01329 0.41% Amr::writePlotFile() 2 0.007416 0.01065 0.01289 0.39% FabArray::Saxpy() 20 0.01058 0.01136 0.01235 0.38% Amr::coarseTimeStep() 10 0.004589 0.008987 0.01222 0.37% Castro::initialize_advance() 10 0.005533 0.008805 0.01203 0.37% VisMF::Write(FabArray) 2 0.007203 0.008232 0.01099 0.34% FabArray::setDomainBndry() 41 0.008609 0.01008 0.01089 0.33% Castro::initMFs() 1 0.006128 0.008173 0.01029 0.32% Castro::construct_old_gravity_source() 10 0.006501 0.00809 0.009227 0.28% Castro::finalize_do_advance() 10 0.0009938 0.004171 0.008611 0.26% StateData::define() 4 0.005254 0.00667 0.008269 0.25% Castro::construct_new_source() 50 0.005686 0.00595 0.006208 0.19% Gravity::get_old_grav_vector() 10 0.001738 0.002532 0.004362 0.13% Gravity::get_new_grav_vector() 11 0.00284 0.003568 0.003972 0.12% main() 1 0.001872 0.00196 0.002079 0.06% AmrLevel::FillPatch() 41 0.0008854 0.000993 0.00119 0.04% Amr::timeStep() 10 0.0001397 0.0001949 0.0004351 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002499 0.0002606 0.0002843 0.01% Castro::do_advance_ctu() 10 0.0001421 0.0001587 0.0001776 0.01% Castro::clean_state() 62 0.0001377 0.0001494 0.0001617 0.00% StateDataPhysBCFunct::() 41 8.715e-05 0.0001018 0.0001199 0.00% FillPatchIterator::FillFromLevel0() 41 8.433e-05 0.0001026 0.0001141 0.00% Castro::do_old_sources() 10 7.589e-05 9.046e-05 0.0001032 0.00% FabArray::ParallelCopy() 41 7.274e-05 8.416e-05 9.824e-05 0.00% Castro::Castro() 1 5.804e-05 7.027e-05 9.18e-05 0.00% Castro::construct_old_source() 50 5.248e-05 6.611e-05 7.445e-05 0.00% Amr::FinalizeInit() 1 3.819e-06 1.338e-05 7.218e-05 0.00% FillPatchSingleLevel 41 5.725e-05 6.51e-05 6.985e-05 0.00% Castro::do_new_sources() 10 4.941e-05 5.999e-05 6.925e-05 0.00% Castro::apply_source_to_state() 20 4.951e-05 5.443e-05 6.343e-05 0.00% Amr::defBaseLevel() 1 3.672e-05 4.813e-05 5.552e-05 0.00% Castro::subcycle_advance_ctu() 10 4.48e-05 4.842e-05 5.253e-05 0.00% Castro::advance() 10 3.342e-05 4.049e-05 4.819e-05 0.00% Castro::construct_old_gravity() 10 2.916e-05 4.011e-05 4.723e-05 0.00% Castro::construct_new_gravity() 10 3.047e-05 3.65e-05 4.575e-05 0.00% Castro::check_for_nan() 20 2.244e-05 2.716e-05 3.771e-05 0.00% Castro::expand_state() 10 2.006e-05 2.325e-05 2.806e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.169e-05 1.68e-05 2.118e-05 0.00% Castro::post_timestep() 10 1.49e-05 1.779e-05 2.071e-05 0.00% Castro::computeNewDt() 9 9.185e-06 1.049e-05 1.233e-05 0.00% Castro::computeInitialDt() 2 5.974e-06 7.504e-06 8.924e-06 0.00% Amr::InitializeInit() 1 3.135e-06 4.181e-06 7.576e-06 0.00% Castro::post_init() 1 2.288e-06 3.003e-06 3.607e-06 0.00% Amr::init() 1 1.814e-06 2.233e-06 2.543e-06 0.00% Amr::initialInit() 1 1.351e-06 1.657e-06 1.916e-06 0.00% Other 260 0.01133 0.0153 0.01909 0.58% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.262 3.264 3.266 100.00% Amr::coarseTimeStep() 10 3.026 3.026 3.026 92.67% Amr::timeStep() 10 3.003 3.006 3.01 92.17% Castro::advance() 10 2.988 2.991 2.995 91.71% Castro::subcycle_advance_ctu() 10 2.921 2.924 2.931 89.73% Castro::do_advance_ctu() 10 2.921 2.924 2.931 89.73% Castro::construct_ctu_hydro_source() 10 2.172 2.175 2.179 66.71% Gravity::make_radial_gravity() 21 0.3043 0.3252 0.3338 10.22% Amr::init() 1 0.2264 0.2285 0.2304 7.05% AmrLevel::FillPatch() 41 0.1903 0.212 0.221 6.77% Amr::initialInit() 1 0.212 0.214 0.216 6.62% Castro::construct_old_gravity() 10 0.1887 0.2064 0.2137 6.54% Gravity::get_old_grav_vector() 10 0.1872 0.2056 0.213 6.52% Gravity::get_new_grav_vector() 11 0.2052 0.2064 0.2078 6.36% FillPatchIterator::Initialize 41 0.1619 0.1829 0.1936 5.93% Amr::InitializeInit() 1 0.05627 0.1044 0.1836 5.62% Amr::defBaseLevel() 1 0.05626 0.1044 0.1836 5.62% Castro::construct_new_gravity() 10 0.1808 0.1816 0.1831 5.61% Castro::initialize_do_advance() 10 0.1563 0.1666 0.181 5.54% check_for_negative_density() 10 0.02792 0.1205 0.1728 5.29% Castro::initData() 1 0.03778 0.08378 0.1623 4.97% Amr::FinalizeInit() 1 0.0293 0.1096 0.1594 4.88% Castro::estTimeStep() 21 0.031 0.1115 0.1569 4.81% FillPatchIterator::FillFromLevel0() 41 0.1113 0.1327 0.1452 4.45% FillPatchSingleLevel 41 0.1112 0.1326 0.1451 4.44% Castro::computeInitialDt() 2 0.002885 0.08365 0.1336 4.09% Castro::expand_state() 10 0.1032 0.1124 0.1185 3.63% Castro::clean_state() 62 0.1021 0.1059 0.1133 3.47% FabArray::ParallelCopy() 41 0.07777 0.09912 0.1124 3.44% Castro::do_old_sources() 10 0.09143 0.09758 0.1052 3.22% amrex::Copy() 193 0.06601 0.07734 0.0934 2.86% FabArray::ParallelCopy_finish() 41 0.04251 0.06562 0.08274 2.53% Castro::computeTemp() 63 0.06291 0.06571 0.07286 2.23% FabArray::setVal() 143 0.06098 0.06477 0.07216 2.21% Castro::initialize_advance() 10 0.0578 0.06465 0.06851 2.10% Castro::do_new_sources() 10 0.05433 0.05778 0.06301 1.93% Castro::reset_internal_energy(MultiFab) 63 0.04471 0.04664 0.05091 1.56% Castro::reset_internal_energy(Fab) 1008 0.04445 0.04638 0.05063 1.55% FabArray::ParallelCopy_nowait() 41 0.02955 0.03341 0.03691 1.13% StateDataPhysBCFunct::() 41 0.03143 0.03346 0.03562 1.09% StateData::FillBoundary(geom) 41 0.03134 0.03336 0.03552 1.09% Castro::normalize_species() 62 0.03381 0.03469 0.03506 1.07% Castro::construct_new_source() 50 0.02626 0.02768 0.02928 0.90% Gravity::interpolate_monopole_grav() 21 0.02525 0.02575 0.02752 0.84% Castro::finalize_do_advance() 10 0.0162 0.02184 0.02661 0.81% Castro::post_init() 1 0.02573 0.02598 0.02628 0.80% Castro::construct_new_gravity_source() 10 0.02054 0.02173 0.02307 0.71% Amr::writePlotFile() 2 0.021 0.02144 0.02184 0.67% Castro::post_timestep() 10 0.01368 0.01425 0.01481 0.45% Castro::Castro() 1 0.009178 0.01173 0.01443 0.44% Castro::check_for_nan() 20 0.009112 0.01033 0.01333 0.41% MultiFab::contains_nan() 20 0.009089 0.0103 0.01329 0.41% Castro::apply_source_to_state() 20 0.01064 0.01141 0.0124 0.38% FabArray::Saxpy() 20 0.01058 0.01136 0.01235 0.38% VisMF::Write(FabArray) 2 0.007203 0.008232 0.01099 0.34% FabArray::setDomainBndry() 41 0.008609 0.01008 0.01089 0.33% Castro::initMFs() 1 0.006128 0.008173 0.01029 0.32% Castro::computeNewDt() 9 0.01014 0.01015 0.01016 0.31% Castro::construct_old_source() 50 0.006558 0.008156 0.009302 0.28% Castro::construct_old_gravity_source() 10 0.006501 0.00809 0.009227 0.28% AmrLevel::AmrLevel(dm) 1 0.00527 0.006687 0.008288 0.25% StateData::define() 4 0.005254 0.00667 0.008269 0.25% Other 260 0.01475 0.02146 0.02761 0.85% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 13 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 4 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 13 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8629 KiB 8645 KiB 8654 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6618 KiB 6624 KiB 6627 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7114 KiB 7122 KiB 7124 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4454 KiB 4460 KiB 4471 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 214 KiB 238 KiB 249 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 13 KiB 15 KiB 19 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2736 KiB 2742 KiB 2746 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 237 KiB 253 KiB 260 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 36 KiB 44 KiB 51 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2021 KiB 2024 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 80 KiB 81 KiB 81 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 73 KiB 80 KiB 83 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.07-26-g4cbe41a72438) finalized