Initializing AMReX (26.07-43-g3b9daa320b6b)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.07-43-g3b9daa320b6b) initialized Starting run at 05:35:51 UTC on 2026-07-16. Successfully read inputs file ... Castro git describe: 26.07 AMReX git describe: 26.07-43-g3b9daa320 Microphysics git describe: 26.07 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013796466 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.317980701 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.327773327 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.321440977 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.31845812 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.357201357 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.282128984 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.276593708 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.275832097 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.280352211 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.276774482 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.00679505 seconds Ending run at 05:35:54 UTC on 2026-07-16. Run time = 3.205994432 Run time without initialization = 3.04408792 Average number of zones advanced per microsecond: 0.861 Average number of zones advanced per microsecond per rank: 0.108 TinyProfiler total time across processes [min...avg...max]: 3.2024 ... 3.2050 ... 3.2060 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 1.9752 2.0583 2.1433 66.85% Gravity::make_radial_gravity() 21 0.2825 0.2904 0.306 9.54% check_for_negative_density() 10 0.0252 0.1128 0.2024 6.31% Castro::initData() 1 0.04386 0.07061 0.09926 3.10% FabArray::ParallelCopy_finish() 41 0.04566 0.05826 0.09035 2.82% amrex::Copy() 193 0.06132 0.07871 0.08872 2.77% Castro::estTimeStep() 21 0.02641 0.05811 0.08274 2.58% FabArray::setVal() 143 0.05466 0.06567 0.0714 2.23% FillPatchIterator::Initialize 41 0.03849 0.04115 0.04893 1.53% Castro::reset_internal_energy(Fab) 1008 0.04432 0.04582 0.04723 1.47% FabArray::ParallelCopy_nowait() 41 0.02598 0.03521 0.03894 1.21% StateData::FillBoundary(geom) 41 0.02967 0.03326 0.03579 1.12% Castro::normalize_species() 62 0.03382 0.03447 0.03576 1.12% Castro::initialize_do_advance() 10 0.01884 0.02126 0.02763 0.86% Gravity::interpolate_monopole_grav() 21 0.02465 0.02497 0.02555 0.80% Castro::construct_new_gravity_source() 10 0.02193 0.02328 0.02526 0.79% Castro::computeTemp() 63 0.01799 0.01865 0.01913 0.60% FabArray::Saxpy() 20 0.01094 0.01279 0.0137 0.43% Castro::initialize_advance() 10 0.005214 0.01025 0.01343 0.42% Amr::writePlotFile() 2 0.007018 0.009982 0.01262 0.39% MultiFab::contains_nan() 20 0.01046 0.01122 0.01204 0.38% FabArray::setDomainBndry() 41 0.007617 0.01067 0.01178 0.37% VisMF::Write(FabArray) 2 0.006934 0.008223 0.01081 0.34% Amr::coarseTimeStep() 10 0.00616 0.009157 0.01068 0.33% Castro::construct_old_gravity_source() 10 0.007037 0.009779 0.0106 0.33% Castro::initMFs() 1 0.006097 0.007265 0.01045 0.33% Castro::finalize_do_advance() 10 0.004173 0.005695 0.009413 0.29% StateData::define() 4 0.005095 0.005962 0.00839 0.26% Castro::construct_new_source() 50 0.005623 0.006097 0.006397 0.20% Gravity::get_new_grav_vector() 11 0.00283 0.003811 0.004346 0.14% Gravity::get_old_grav_vector() 10 0.001701 0.002478 0.002993 0.09% main() 1 0.00188 0.001995 0.002381 0.07% AmrLevel::FillPatch() 41 0.0007949 0.001066 0.001352 0.04% Amr::timeStep() 10 0.0001572 0.0001931 0.0003726 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002425 0.000257 0.0002718 0.01% Castro::do_advance_ctu() 10 0.0001544 0.0001691 0.0001937 0.01% Castro::clean_state() 62 0.0001446 0.0001542 0.0001673 0.01% FillPatchIterator::FillFromLevel0() 41 0.0001057 0.0001121 0.0001202 0.00% StateDataPhysBCFunct::() 41 9.494e-05 0.000104 0.0001131 0.00% Castro::do_old_sources() 10 8.58e-05 9.616e-05 0.0001098 0.00% FabArray::ParallelCopy() 41 8.006e-05 8.679e-05 9.633e-05 0.00% Castro::Castro() 1 6.326e-05 8.414e-05 9.612e-05 0.00% Castro::construct_old_source() 50 5.721e-05 7.919e-05 8.895e-05 0.00% Amr::FinalizeInit() 1 4.008e-06 1.472e-05 8.383e-05 0.00% FillPatchSingleLevel 41 6.422e-05 7.108e-05 7.558e-05 0.00% Castro::do_new_sources() 10 5.659e-05 6.104e-05 6.657e-05 0.00% Castro::apply_source_to_state() 20 4.773e-05 5.467e-05 6.228e-05 0.00% Amr::defBaseLevel() 1 4.125e-05 5.132e-05 6.044e-05 0.00% Castro::subcycle_advance_ctu() 10 4.367e-05 5.052e-05 5.633e-05 0.00% Castro::construct_old_gravity() 10 3.285e-05 4.067e-05 4.434e-05 0.00% Castro::advance() 10 3.357e-05 3.711e-05 4.055e-05 0.00% Castro::construct_new_gravity() 10 2.843e-05 3.716e-05 4.047e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.329e-05 1.975e-05 3.166e-05 0.00% Castro::post_timestep() 10 1.539e-05 1.918e-05 2.97e-05 0.00% Castro::check_for_nan() 20 2.278e-05 2.586e-05 2.789e-05 0.00% Castro::expand_state() 10 1.922e-05 2.222e-05 2.574e-05 0.00% Castro::computeNewDt() 9 8.761e-06 9.756e-06 1.265e-05 0.00% Castro::post_init() 1 2.888e-06 4.906e-06 1.038e-05 0.00% Castro::computeInitialDt() 2 6.474e-06 7.831e-06 1.013e-05 0.00% Amr::InitializeInit() 1 2.894e-06 4.407e-06 7.395e-06 0.00% Amr::init() 1 1.793e-06 2.354e-06 3.099e-06 0.00% Amr::initialInit() 1 1.328e-06 1.829e-06 2.308e-06 0.00% Other 260 0.01139 0.01581 0.01851 0.58% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.202 3.205 3.206 100.00% Amr::coarseTimeStep() 10 3.035 3.035 3.035 94.67% Amr::timeStep() 10 3.012 3.014 3.017 94.10% Castro::advance() 10 2.998 2.999 3.003 93.66% Castro::subcycle_advance_ctu() 10 2.924 2.93 2.944 91.81% Castro::do_advance_ctu() 10 2.924 2.93 2.943 91.81% Castro::construct_ctu_hydro_source() 10 2.188 2.191 2.197 68.54% Gravity::make_radial_gravity() 21 0.2999 0.3077 0.3195 9.96% AmrLevel::FillPatch() 41 0.2017 0.2109 0.2183 6.81% Gravity::get_new_grav_vector() 11 0.2056 0.2073 0.2078 6.48% check_for_negative_density() 10 0.0252 0.1128 0.2024 6.31% FillPatchIterator::Initialize 41 0.1681 0.179 0.1948 6.08% Castro::construct_old_gravity() 10 0.1813 0.1851 0.1929 6.02% Gravity::get_old_grav_vector() 10 0.1805 0.1844 0.1923 6.00% Castro::construct_new_gravity() 10 0.1842 0.1854 0.1861 5.80% Castro::initialize_do_advance() 10 0.1703 0.173 0.1766 5.51% Amr::init() 1 0.1579 0.1607 0.1616 5.04% Amr::initialInit() 1 0.1439 0.1467 0.1477 4.61% FillPatchIterator::FillFromLevel0() 41 0.1127 0.1272 0.1464 4.57% FillPatchSingleLevel 41 0.1126 0.1271 0.1463 4.56% Castro::expand_state() 10 0.1093 0.1178 0.1234 3.85% Amr::InitializeInit() 1 0.06992 0.09435 0.1219 3.80% Amr::defBaseLevel() 1 0.06991 0.09435 0.1219 3.80% FabArray::ParallelCopy() 41 0.08046 0.09366 0.1165 3.63% Castro::clean_state() 62 0.1026 0.1047 0.1066 3.32% Castro::initData() 1 0.04702 0.07433 0.1027 3.20% Castro::do_old_sources() 10 0.0931 0.09549 0.09901 3.09% FabArray::ParallelCopy_finish() 41 0.04566 0.05826 0.09035 2.82% amrex::Copy() 193 0.06132 0.07871 0.08872 2.77% Castro::estTimeStep() 21 0.02641 0.05811 0.08274 2.58% Amr::FinalizeInit() 1 0.02573 0.05231 0.07416 2.31% FabArray::setVal() 143 0.05466 0.06567 0.0714 2.23% Castro::initialize_advance() 10 0.05344 0.06636 0.07099 2.21% Castro::computeTemp() 63 0.06258 0.06472 0.06651 2.07% Castro::do_new_sources() 10 0.05627 0.06099 0.06589 2.06% Castro::computeInitialDt() 2 0.002473 0.02911 0.05092 1.59% Castro::reset_internal_energy(MultiFab) 63 0.04459 0.04607 0.04749 1.48% Castro::reset_internal_energy(Fab) 1008 0.04432 0.04582 0.04723 1.47% FabArray::ParallelCopy_nowait() 41 0.02608 0.03531 0.03903 1.22% StateDataPhysBCFunct::() 41 0.02976 0.03336 0.03591 1.12% StateData::FillBoundary(geom) 41 0.02967 0.03326 0.03579 1.12% Castro::normalize_species() 62 0.03382 0.03447 0.03576 1.12% Castro::construct_new_source() 50 0.02755 0.02937 0.03138 0.98% Castro::finalize_do_advance() 10 0.01646 0.02389 0.03006 0.94% Gravity::interpolate_monopole_grav() 21 0.02465 0.02497 0.02555 0.80% Castro::construct_new_gravity_source() 10 0.02193 0.02328 0.02526 0.79% Castro::post_init() 1 0.02273 0.02305 0.02323 0.72% Amr::writePlotFile() 2 0.02076 0.02088 0.02135 0.67% Castro::post_timestep() 10 0.0138 0.01436 0.01475 0.46% Castro::Castro() 1 0.009611 0.01117 0.01426 0.44% Castro::apply_source_to_state() 20 0.01099 0.01284 0.01375 0.43% FabArray::Saxpy() 20 0.01094 0.01279 0.0137 0.43% Castro::check_for_nan() 20 0.01049 0.01125 0.01206 0.38% MultiFab::contains_nan() 20 0.01046 0.01122 0.01204 0.38% FabArray::setDomainBndry() 41 0.007617 0.01067 0.01178 0.37% Castro::computeNewDt() 9 0.01077 0.01082 0.01086 0.34% VisMF::Write(FabArray) 2 0.006934 0.008223 0.01081 0.34% Castro::construct_old_source() 50 0.007094 0.009859 0.01068 0.33% Castro::construct_old_gravity_source() 10 0.007037 0.009779 0.0106 0.33% Castro::initMFs() 1 0.006097 0.007265 0.01045 0.33% AmrLevel::AmrLevel(dm) 1 0.005112 0.005982 0.008414 0.26% StateData::define() 4 0.005095 0.005962 0.00839 0.26% Other 260 0.01512 0.02263 0.02653 0.83% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8628 KiB 8647 KiB 8652 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6760 KiB 6766 KiB 6770 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7113 KiB 7122 KiB 7124 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4543 KiB 4550 KiB 4570 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 233 KiB 247 KiB 258 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 13 KiB 15 KiB 19 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2799 KiB 2800 KiB 2804 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 238 KiB 244 KiB 254 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 36 KiB 45 KiB 55 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2021 KiB 2024 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 82 KiB 82 KiB 83 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 72 KiB 73 KiB 76 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.07-43-g3b9daa320b6b) finalized