Initializing AMReX (26.09-125-g523e7305089a)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.09-125-g523e7305089a) initialized Starting run at 05:20:06 UTC on 2026-09-16. Successfully read inputs file ... Castro git describe: 26.09-1-g5a7b24df8 AMReX git describe: 26.09-125-g523e73050 Microphysics git describe: 26.09-15-ge4b401b7 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014220925 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.32221591 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.326379794 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.321711711 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.318836633 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.362168397 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.282137674 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.274729332 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.276610013 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.277127592 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.274386893 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007937453 seconds Ending run at 05:20:09 UTC on 2026-09-16. Run time = 3.224928572 Run time without initialization = 3.046722722 Average number of zones advanced per microsecond: 0.860 Average number of zones advanced per microsecond per rank: 0.108 TinyProfiler total time across processes [min...avg...max]: 3.2207 ... 3.2234 ... 3.2250 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 1.9847 2.0372 2.1381 66.30% Gravity::make_radial_gravity() 21 0.279 0.2858 0.2925 9.07% check_for_negative_density() 10 0.01849 0.1194 0.1756 5.45% Castro::estTimeStep() 21 0.02667 0.07196 0.1145 3.55% Castro::initData() 1 0.03436 0.07005 0.1068 3.31% amrex::Copy() 193 0.07741 0.08417 0.09479 2.94% FabArray::setVal() 143 0.05978 0.0652 0.07038 2.18% FabArray::ParallelCopy_finish() 41 0.0456 0.0526 0.06444 2.00% FillPatchIterator::Initialize 41 0.04531 0.0475 0.05092 1.58% Castro::reset_internal_energy(Fab) 1008 0.04531 0.04633 0.04762 1.48% StateData::FillBoundary(geom) 41 0.03192 0.03501 0.04549 1.41% FabArray::ParallelCopy_nowait() 41 0.03484 0.03719 0.0395 1.22% Castro::normalize_species() 62 0.03379 0.03458 0.03517 1.09% Castro::initialize_do_advance() 10 0.02729 0.02887 0.03177 0.98% Gravity::interpolate_monopole_grav() 21 0.02513 0.02535 0.02553 0.79% Castro::construct_new_gravity_source() 10 0.02266 0.02385 0.02531 0.78% Castro::construct_old_gravity_source() 10 0.008637 0.01175 0.01978 0.61% Castro::computeTemp() 63 0.01857 0.01882 0.01928 0.60% FabArray::Saxpy() 20 0.0125 0.0135 0.01434 0.44% Castro::initialize_advance() 10 0.009495 0.01097 0.01308 0.41% FabArray::setDomainBndry() 41 0.009033 0.01133 0.01264 0.39% Amr::writePlotFile() 2 0.007204 0.01096 0.01198 0.37% VisMF::Write(FabArray) 2 0.007953 0.008662 0.01196 0.37% MultiFab::contains_nan() 20 0.009632 0.01049 0.01154 0.36% Castro::finalize_do_advance() 10 0.009796 0.01044 0.01092 0.34% Castro::initMFs() 1 0.00612 0.007374 0.01028 0.32% StateData::define() 4 0.005082 0.006005 0.008175 0.25% Castro::construct_new_source() 50 0.006026 0.00626 0.006508 0.20% Amr::coarseTimeStep() 10 0.00419 0.004532 0.005438 0.17% Gravity::get_new_grav_vector() 11 0.00299 0.003695 0.004143 0.13% Gravity::get_old_grav_vector() 10 0.001895 0.002522 0.002835 0.09% main() 1 0.001835 0.001872 0.001943 0.06% AmrLevel::FillPatch() 41 0.001025 0.0012 0.001873 0.06% Amr::timeStep() 10 0.0001415 0.0001871 0.0003942 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002374 0.0002493 0.0002664 0.01% Castro::do_advance_ctu() 10 0.0001517 0.0001698 0.0001892 0.01% Castro::clean_state() 62 0.0001348 0.000149 0.0001662 0.01% StateDataPhysBCFunct::() 41 0.0001151 0.0001211 0.0001458 0.00% Castro::construct_old_source() 50 6.494e-05 8.296e-05 0.0001331 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001008 0.0001131 0.0001325 0.00% Castro::do_old_sources() 10 7.5e-05 9.291e-05 0.0001103 0.00% Castro::Castro() 1 5.995e-05 8.3e-05 0.000104 0.00% FabArray::ParallelCopy() 41 8.41e-05 9.173e-05 0.0001001 0.00% Amr::FinalizeInit() 1 3.467e-06 1.73e-05 9.67e-05 0.00% FillPatchSingleLevel 41 6.274e-05 7.086e-05 7.698e-05 0.00% Castro::do_new_sources() 10 5.612e-05 6.303e-05 7.063e-05 0.00% Castro::subcycle_advance_ctu() 10 4.31e-05 5.228e-05 6.706e-05 0.00% Amr::defBaseLevel() 1 3.165e-05 4.188e-05 6.314e-05 0.00% Castro::advance() 10 4.752e-05 5.688e-05 6.18e-05 0.00% Castro::apply_source_to_state() 20 4.769e-05 5.453e-05 5.934e-05 0.00% Castro::construct_old_gravity() 10 3.683e-05 4.05e-05 4.411e-05 0.00% Castro::construct_new_gravity() 10 2.896e-05 3.675e-05 4.343e-05 0.00% Castro::expand_state() 10 1.869e-05 2.24e-05 3.056e-05 0.00% Castro::check_for_nan() 20 2.253e-05 2.477e-05 2.79e-05 0.00% Castro::post_timestep() 10 1.472e-05 1.764e-05 2.203e-05 0.00% AmrLevel::AmrLevel(dm) 1 6.224e-06 1e-05 1.356e-05 0.00% Castro::computeNewDt() 9 8.865e-06 1.04e-05 1.168e-05 0.00% Castro::post_init() 1 2.716e-06 4.098e-06 9.418e-06 0.00% Castro::computeInitialDt() 2 6.485e-06 7.214e-06 8.031e-06 0.00% Amr::InitializeInit() 1 2.49e-06 3.466e-06 6.814e-06 0.00% Amr::init() 1 1.464e-06 2.389e-06 2.945e-06 0.00% Amr::initialInit() 1 1.37e-06 1.641e-06 2.077e-06 0.00% Other 260 0.01145 0.01612 0.01913 0.59% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.221 3.223 3.225 100.00% Amr::coarseTimeStep() 10 3.037 3.037 3.037 94.17% Amr::timeStep() 10 3.02 3.021 3.021 93.69% Castro::advance() 10 3.005 3.007 3.007 93.24% Castro::subcycle_advance_ctu() 10 2.935 2.938 2.946 91.36% Castro::do_advance_ctu() 10 2.935 2.938 2.946 91.36% Castro::construct_ctu_hydro_source() 10 2.16 2.176 2.182 67.67% Gravity::make_radial_gravity() 21 0.2966 0.3038 0.31 9.61% AmrLevel::FillPatch() 41 0.2123 0.2195 0.2324 7.21% Gravity::get_new_grav_vector() 11 0.206 0.2071 0.2078 6.44% FillPatchIterator::Initialize 41 0.1758 0.1841 0.1907 5.91% Castro::construct_old_gravity() 10 0.1792 0.1838 0.1891 5.86% Gravity::get_old_grav_vector() 10 0.1784 0.183 0.1884 5.84% Castro::construct_new_gravity() 10 0.1842 0.1848 0.1858 5.76% Castro::initialize_do_advance() 10 0.1761 0.1791 0.1824 5.66% Amr::init() 1 0.1734 0.1762 0.1778 5.51% check_for_negative_density() 10 0.01849 0.1194 0.1756 5.45% Amr::initialInit() 1 0.1588 0.1617 0.1634 5.07% Amr::InitializeInit() 1 0.05685 0.09354 0.1325 4.11% Amr::defBaseLevel() 1 0.05685 0.09354 0.1325 4.11% FillPatchIterator::FillFromLevel0() 41 0.1138 0.1253 0.1319 4.09% FillPatchSingleLevel 41 0.1137 0.1252 0.1318 4.09% Castro::do_old_sources() 10 0.1018 0.1076 0.1213 3.76% Castro::expand_state() 10 0.1136 0.116 0.1185 3.68% Castro::estTimeStep() 21 0.02667 0.07196 0.1145 3.55% Castro::initData() 1 0.03796 0.07355 0.1101 3.41% Castro::clean_state() 62 0.1038 0.1056 0.1068 3.31% Amr::FinalizeInit() 1 0.02622 0.06819 0.1057 3.28% FabArray::ParallelCopy() 41 0.08062 0.08998 0.09967 3.09% amrex::Copy() 193 0.07741 0.08417 0.09479 2.94% Castro::computeInitialDt() 2 0.002468 0.04433 0.08174 2.53% FabArray::setVal() 143 0.05978 0.0652 0.07038 2.18% Castro::initialize_advance() 10 0.05736 0.06567 0.06849 2.12% Castro::do_new_sources() 10 0.05887 0.06292 0.06654 2.06% Castro::computeTemp() 63 0.06416 0.06539 0.06645 2.06% FabArray::ParallelCopy_finish() 41 0.0456 0.0526 0.06444 2.00% Castro::reset_internal_energy(MultiFab) 63 0.04556 0.04657 0.04788 1.48% Castro::reset_internal_energy(Fab) 1008 0.04531 0.04633 0.04762 1.48% StateDataPhysBCFunct::() 41 0.03203 0.03513 0.04564 1.42% StateData::FillBoundary(geom) 41 0.03192 0.03501 0.04549 1.41% FabArray::ParallelCopy_nowait() 41 0.03493 0.03729 0.03961 1.23% Castro::normalize_species() 62 0.03379 0.03458 0.03517 1.09% Castro::finalize_do_advance() 10 0.02352 0.02798 0.0327 1.01% Castro::construct_new_source() 50 0.02875 0.03011 0.03157 0.98% Gravity::interpolate_monopole_grav() 21 0.02513 0.02535 0.02553 0.79% Castro::construct_new_gravity_source() 10 0.02266 0.02385 0.02531 0.78% Castro::post_init() 1 0.02354 0.02361 0.02365 0.73% Amr::writePlotFile() 2 0.0224 0.02252 0.02264 0.70% Castro::construct_old_source() 50 0.008703 0.01183 0.01991 0.62% Castro::construct_old_gravity_source() 10 0.008637 0.01175 0.01978 0.61% Castro::post_timestep() 10 0.01408 0.01433 0.0148 0.46% Castro::apply_source_to_state() 20 0.01255 0.01355 0.0144 0.45% FabArray::Saxpy() 20 0.0125 0.0135 0.01434 0.44% Castro::Castro() 1 0.00955 0.01104 0.01428 0.44% FabArray::setDomainBndry() 41 0.009033 0.01133 0.01264 0.39% VisMF::Write(FabArray) 2 0.007953 0.008662 0.01196 0.37% Castro::check_for_nan() 20 0.00966 0.01051 0.01157 0.36% MultiFab::contains_nan() 20 0.009632 0.01049 0.01154 0.36% Castro::initMFs() 1 0.00612 0.007374 0.01028 0.32% Castro::computeNewDt() 9 0.0101 0.01011 0.01013 0.31% AmrLevel::AmrLevel(dm) 1 0.005095 0.006015 0.008189 0.25% StateData::define() 4 0.005082 0.006005 0.008175 0.25% Other 260 0.01521 0.0232 0.02829 0.88% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 13 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 13 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8640 KiB 8648 KiB 8654 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6726 KiB 6734 KiB 6736 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7114 KiB 7123 KiB 7125 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4524 KiB 4529 KiB 4543 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 245 KiB 251 KiB 262 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 15 KiB 16 KiB 21 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2787 KiB 2791 KiB 2793 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 234 KiB 239 KiB 244 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 36 KiB 40 KiB 44 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2022 KiB 2024 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 81 KiB 82 KiB 82 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 70 KiB 72 KiB 74 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.09-125-g523e7305089a) finalized