Initializing AMReX (26.09-175-gf2e8bf0a946a)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.09-175-gf2e8bf0a946a) initialized Starting run at 05:22:11 UTC on 2026-09-25. Successfully read inputs file ... Castro git describe: 26.09-7-g6034546b6 AMReX git describe: 26.09-175-gf2e8bf0a9 Microphysics git describe: 26.09-22-gc57e65d3 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014407629 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.327943686 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.313401349 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.314450294 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.320978358 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.357962071 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.284256157 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.274385416 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.276575851 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.274859891 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.27697175 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.006984115 seconds Ending run at 05:22:14 UTC on 2026-09-25. Run time = 3.216461817 Run time without initialization = 3.031303301 Average number of zones advanced per microsecond: 0.865 Average number of zones advanced per microsecond per rank: 0.108 TinyProfiler total time across processes [min...avg...max]: 3.2155 ... 3.2160 ... 3.2165 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0026 2.0362 2.0826 64.75% Gravity::make_radial_gravity() 21 0.2849 0.29 0.3009 9.35% check_for_negative_density() 10 0.0463 0.0982 0.1408 4.38% Castro::initData() 1 0.03478 0.07157 0.1192 3.71% Castro::estTimeStep() 21 0.0286 0.07849 0.1189 3.70% FabArray::ParallelCopy_finish() 41 0.04489 0.06242 0.1088 3.38% amrex::Copy() 193 0.07447 0.08741 0.09866 3.07% FabArray::setVal() 143 0.05981 0.06639 0.07161 2.23% FillPatchIterator::Initialize 41 0.03515 0.04621 0.04907 1.53% Castro::reset_internal_energy(Fab) 1008 0.0441 0.04576 0.04686 1.46% FabArray::ParallelCopy_nowait() 41 0.03213 0.03794 0.04075 1.27% Castro::normalize_species() 62 0.03389 0.03493 0.03666 1.14% StateData::FillBoundary(geom) 41 0.03023 0.0334 0.03564 1.11% Castro::initialize_do_advance() 10 0.01083 0.02617 0.02884 0.90% Gravity::interpolate_monopole_grav() 21 0.02488 0.02513 0.02553 0.79% Castro::construct_new_gravity_source() 10 0.02224 0.02364 0.02504 0.78% Castro::construct_old_gravity_source() 10 0.008387 0.01174 0.02154 0.67% Castro::computeTemp() 63 0.01818 0.0186 0.01914 0.59% FabArray::Saxpy() 20 0.01256 0.01373 0.016 0.50% Castro::initialize_advance() 10 0.006153 0.01045 0.01336 0.42% Castro::finalize_do_advance() 10 0.00123 0.01015 0.01271 0.40% Amr::coarseTimeStep() 10 0.001363 0.003889 0.0127 0.39% FabArray::setDomainBndry() 41 0.008556 0.01114 0.01235 0.38% VisMF::Write(FabArray) 2 0.008177 0.008669 0.01111 0.35% Amr::writePlotFile() 2 0.007315 0.01009 0.0107 0.33% MultiFab::contains_nan() 20 0.00905 0.009955 0.01066 0.33% Castro::initMFs() 1 0.006178 0.006758 0.008021 0.25% Castro::enforce_min_density() 62 0.006076 0.006295 0.006541 0.20% Castro::construct_new_source() 50 0.006207 0.006357 0.006519 0.20% Gravity::get_new_grav_vector() 11 0.003453 0.003841 0.004152 0.13% Gravity::get_old_grav_vector() 10 0.002188 0.002536 0.002687 0.08% main() 1 0.001865 0.001946 0.002036 0.06% AmrLevel::FillPatch() 41 0.00102 0.001163 0.00126 0.04% Amr::timeStep() 10 0.0001532 0.0001952 0.0003693 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002394 0.0002531 0.0002728 0.01% Amr::defBaseLevel() 1 3.625e-05 6.845e-05 0.0002191 0.01% Castro::do_advance_ctu() 10 0.0001378 0.0001671 0.0001959 0.01% Castro::clean_state() 62 0.0001359 0.0001522 0.0001723 0.01% Castro::construct_old_source() 50 5.75e-05 9.088e-05 0.0001623 0.01% StateDataPhysBCFunct::() 41 0.0001133 0.0001238 0.0001506 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001081 0.0001185 0.0001277 0.00% Castro::Castro() 1 6.25e-05 8.943e-05 0.0001162 0.00% Castro::do_old_sources() 10 8.163e-05 9.61e-05 0.0001048 0.00% FabArray::ParallelCopy() 41 8.13e-05 9.069e-05 0.0001031 0.00% Amr::FinalizeInit() 1 4.424e-06 1.74e-05 9.82e-05 0.00% Castro::do_new_sources() 10 5.847e-05 6.609e-05 7.543e-05 0.00% FillPatchSingleLevel 41 6.384e-05 7.027e-05 7.506e-05 0.00% Castro::advance() 10 4.658e-05 5.524e-05 7.242e-05 0.00% Castro::apply_source_to_state() 20 5.145e-05 5.783e-05 6.189e-05 0.00% Castro::subcycle_advance_ctu() 10 4.403e-05 5.367e-05 6.11e-05 0.00% Castro::construct_new_gravity() 10 3.392e-05 3.926e-05 4.939e-05 0.00% Castro::construct_old_gravity() 10 3.493e-05 3.942e-05 4.374e-05 0.00% Castro::check_for_nan() 20 2.373e-05 2.723e-05 3.009e-05 0.00% Castro::expand_state() 10 1.901e-05 2.247e-05 2.636e-05 0.00% Castro::post_timestep() 10 1.624e-05 1.827e-05 1.967e-05 0.00% Castro::computeNewDt() 9 8.019e-06 9.796e-06 1.355e-05 0.00% Castro::post_init() 1 2.735e-06 4.362e-06 1.007e-05 0.00% Castro::computeInitialDt() 2 6.035e-06 7.02e-06 7.942e-06 0.00% Amr::InitializeInit() 1 2.454e-06 3.708e-06 6.782e-06 0.00% Amr::init() 1 1.888e-06 2.311e-06 2.589e-06 0.00% Amr::initialInit() 1 1.449e-06 1.878e-06 2.151e-06 0.00% Other 203 0.01038 0.01293 0.01525 0.47% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.216 3.216 3.216 100.00% Amr::coarseTimeStep() 10 3.022 3.022 3.022 93.96% Amr::timeStep() 10 2.998 3.007 3.009 93.56% Castro::advance() 10 2.983 2.992 2.995 93.11% Castro::subcycle_advance_ctu() 10 2.919 2.923 2.928 91.03% Castro::do_advance_ctu() 10 2.919 2.923 2.928 91.03% Castro::construct_ctu_hydro_source() 10 2.147 2.153 2.162 67.22% Gravity::make_radial_gravity() 21 0.3033 0.3083 0.3162 9.83% AmrLevel::FillPatch() 41 0.201 0.229 0.2424 7.54% FillPatchIterator::Initialize 41 0.1685 0.1916 0.2155 6.70% Gravity::get_new_grav_vector() 11 0.208 0.2092 0.2104 6.54% Castro::construct_old_gravity() 10 0.1831 0.1863 0.1935 6.02% Gravity::get_old_grav_vector() 10 0.1824 0.1856 0.1929 6.00% Castro::construct_new_gravity() 10 0.184 0.1846 0.1852 5.76% Amr::init() 1 0.1835 0.1844 0.1848 5.74% Castro::initialize_do_advance() 10 0.1689 0.1743 0.18 5.60% FillPatchIterator::FillFromLevel0() 41 0.11 0.1343 0.1718 5.34% FillPatchSingleLevel 41 0.1099 0.1341 0.1717 5.34% Amr::initialInit() 1 0.1689 0.1697 0.1702 5.29% FabArray::ParallelCopy() 41 0.07949 0.1005 0.1411 4.39% check_for_negative_density() 10 0.0463 0.0982 0.1408 4.38% Amr::InitializeInit() 1 0.05533 0.09227 0.1405 4.37% Amr::defBaseLevel() 1 0.05533 0.09226 0.1405 4.37% Castro::expand_state() 10 0.1066 0.1142 0.1339 4.16% Castro::do_old_sources() 10 0.1105 0.1188 0.1228 3.82% Castro::initData() 1 0.03835 0.07535 0.1227 3.81% Castro::estTimeStep() 21 0.0286 0.07849 0.1189 3.70% Amr::FinalizeInit() 1 0.02898 0.0774 0.1147 3.57% FabArray::ParallelCopy_finish() 41 0.04489 0.06242 0.1088 3.38% Castro::clean_state() 62 0.1022 0.1051 0.108 3.36% amrex::Copy() 193 0.07447 0.08741 0.09866 3.07% Castro::computeInitialDt() 2 0.002816 0.05141 0.08876 2.76% FabArray::setVal() 143 0.05981 0.06639 0.07161 2.23% Castro::initialize_advance() 10 0.05223 0.06587 0.07053 2.19% Castro::do_new_sources() 10 0.05961 0.0627 0.06653 2.07% Castro::computeTemp() 63 0.06252 0.06461 0.06624 2.06% Castro::reset_internal_energy(MultiFab) 63 0.04435 0.04601 0.0471 1.46% Castro::reset_internal_energy(Fab) 1008 0.0441 0.04576 0.04686 1.46% FabArray::ParallelCopy_nowait() 41 0.03225 0.03803 0.04084 1.27% Castro::normalize_species() 62 0.03389 0.03493 0.03666 1.14% StateDataPhysBCFunct::() 41 0.03035 0.03352 0.03576 1.11% StateData::FillBoundary(geom) 41 0.03023 0.0334 0.03564 1.11% Castro::finalize_do_advance() 10 0.0153 0.02711 0.03239 1.01% Castro::construct_new_source() 50 0.02859 0.03 0.03156 0.98% Castro::post_init() 1 0.02581 0.02588 0.02598 0.81% Gravity::interpolate_monopole_grav() 21 0.02488 0.02513 0.02553 0.79% Castro::construct_new_gravity_source() 10 0.02224 0.02364 0.02504 0.78% Amr::writePlotFile() 2 0.02158 0.02177 0.02197 0.68% Castro::construct_old_source() 50 0.008445 0.01183 0.0217 0.67% Castro::construct_old_gravity_source() 10 0.008387 0.01174 0.02154 0.67% Castro::apply_source_to_state() 20 0.01261 0.01379 0.01606 0.50% FabArray::Saxpy() 20 0.01256 0.01373 0.016 0.50% Castro::post_timestep() 10 0.01383 0.01428 0.01464 0.46% FabArray::setDomainBndry() 41 0.008556 0.01114 0.01235 0.38% Castro::Castro() 1 0.01001 0.01066 0.0115 0.36% VisMF::Write(FabArray) 2 0.008177 0.008669 0.01111 0.35% Castro::check_for_nan() 20 0.009077 0.009982 0.01069 0.33% MultiFab::contains_nan() 20 0.00905 0.009955 0.01066 0.33% Castro::computeNewDt() 9 0.01012 0.01014 0.01015 0.32% Castro::initMFs() 1 0.006178 0.006758 0.008021 0.25% Castro::enforce_min_density() 62 0.006076 0.006295 0.006541 0.20% Other 203 0.01978 0.02378 0.02725 0.85% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 13 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 4 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 13 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8640 KiB 8657 KiB 8661 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6704 KiB 6714 KiB 6717 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7115 KiB 7128 KiB 7131 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4511 KiB 4517 KiB 4530 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 229 KiB 260 KiB 284 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 KiB 16 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2771 KiB 2785 KiB 2787 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 240 KiB 243 KiB 249 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 36 KiB 44 KiB 68 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2022 KiB 2026 KiB 2027 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 82 KiB 83 KiB 83 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 72 KiB 73 KiB 76 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.09-175-gf2e8bf0a946a) finalized