Initializing AMReX (26.09-188-g2ceecb347bea)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.09-188-g2ceecb347bea) initialized Starting run at 05:24:24 UTC on 2026-09-30. Successfully read inputs file ... Castro git describe: 26.09-8-gfad7ade51 AMReX git describe: 26.09-188-g2ceecb347 Microphysics git describe: 26.09-22-gc57e65d3 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.01527911 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.3275021 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.325376614 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.316722786 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.315085125 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.352044309 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.283074552 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.272349264 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.27354264 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.275465179 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.27243695 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007904088 seconds Ending run at 05:24:27 UTC on 2026-09-30. Run time = 3.190624933 Run time without initialization = 3.024105184 Average number of zones advanced per microsecond: 0.867 Average number of zones advanced per microsecond per rank: 0.108 TinyProfiler total time across processes [min...avg...max]: 3.1898 ... 3.1901 ... 3.1907 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 1.9859 2.0414 2.1072 66.04% Gravity::make_radial_gravity() 21 0.2814 0.2879 0.3012 9.44% check_for_negative_density() 10 0.03655 0.1063 0.1664 5.22% Castro::estTimeStep() 21 0.03107 0.06443 0.1027 3.22% Castro::initData() 1 0.03504 0.06916 0.1025 3.21% amrex::Copy() 193 0.068 0.08192 0.09066 2.84% FabArray::ParallelCopy_finish() 41 0.0381 0.04628 0.07159 2.24% FabArray::setVal() 143 0.05585 0.06515 0.07039 2.21% FillPatchIterator::Initialize 41 0.04562 0.04691 0.04839 1.52% Castro::reset_internal_energy(Fab) 1008 0.04403 0.04562 0.04692 1.47% FabArray::ParallelCopy_nowait() 41 0.0294 0.03694 0.03945 1.24% StateData::FillBoundary(geom) 41 0.03116 0.03333 0.03576 1.12% Castro::normalize_species() 62 0.03399 0.03433 0.03452 1.08% Castro::initialize_do_advance() 10 0.02746 0.02893 0.03195 1.00% Gravity::interpolate_monopole_grav() 21 0.02516 0.02553 0.02589 0.81% Castro::construct_new_gravity_source() 10 0.02219 0.02338 0.02506 0.79% Castro::computeTemp() 63 0.0184 0.01864 0.01891 0.59% FabArray::Saxpy() 20 0.01053 0.01283 0.01398 0.44% Castro::initialize_advance() 10 0.009565 0.01099 0.01333 0.42% VisMF::Write(FabArray) 2 0.007949 0.008808 0.01326 0.42% Amr::writePlotFile() 2 0.006969 0.01178 0.01282 0.40% FabArray::setDomainBndry() 41 0.008474 0.01135 0.01256 0.39% Castro::finalize_do_advance() 10 0.009662 0.01072 0.0115 0.36% MultiFab::contains_nan() 20 0.009382 0.01013 0.01111 0.35% Castro::construct_old_gravity_source() 10 0.006942 0.009974 0.01094 0.34% Castro::initMFs() 1 0.006121 0.006682 0.007878 0.25% Castro::enforce_min_density() 62 0.006065 0.006304 0.006647 0.21% Castro::construct_new_source() 50 0.005708 0.006113 0.006402 0.20% Amr::coarseTimeStep() 10 0.003557 0.004458 0.005886 0.18% Gravity::get_new_grav_vector() 11 0.002904 0.00381 0.00431 0.14% Gravity::get_old_grav_vector() 10 0.001989 0.002472 0.002776 0.09% main() 1 0.001772 0.001872 0.002072 0.06% AmrLevel::FillPatch() 41 0.0009216 0.001136 0.001303 0.04% Amr::timeStep() 10 0.0001441 0.0001935 0.0003713 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002447 0.0002541 0.0002823 0.01% Castro::do_advance_ctu() 10 0.0001532 0.0001674 0.0001982 0.01% Castro::clean_state() 62 0.0001384 0.0001538 0.000168 0.01% Castro::Castro() 1 5.82e-05 9.587e-05 0.0001332 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001066 0.0001135 0.0001248 0.00% Castro::do_old_sources() 10 8.324e-05 9.934e-05 0.0001218 0.00% StateDataPhysBCFunct::() 41 0.0001055 0.0001149 0.0001206 0.00% Castro::construct_old_source() 50 6.967e-05 8.488e-05 0.0001145 0.00% FabArray::ParallelCopy() 41 8.043e-05 9.238e-05 0.0001079 0.00% Amr::FinalizeInit() 1 4.08e-06 1.481e-05 8.293e-05 0.00% Castro::do_new_sources() 10 5.847e-05 6.629e-05 7.632e-05 0.00% FillPatchSingleLevel 41 6.118e-05 6.664e-05 7.426e-05 0.00% Castro::apply_source_to_state() 20 5.267e-05 5.724e-05 6.386e-05 0.00% Castro::advance() 10 4.583e-05 5.141e-05 6.086e-05 0.00% Castro::subcycle_advance_ctu() 10 4.551e-05 5.215e-05 5.951e-05 0.00% Amr::defBaseLevel() 1 3.806e-05 4.494e-05 5.031e-05 0.00% Castro::construct_new_gravity() 10 3.138e-05 3.697e-05 4.83e-05 0.00% Castro::construct_old_gravity() 10 3.738e-05 4.08e-05 4.798e-05 0.00% Castro::expand_state() 10 2.233e-05 2.604e-05 3.161e-05 0.00% Castro::check_for_nan() 20 2.221e-05 2.5e-05 2.87e-05 0.00% Castro::post_timestep() 10 1.579e-05 1.896e-05 2.155e-05 0.00% Castro::post_init() 1 2.535e-06 5.021e-06 1.138e-05 0.00% Castro::computeNewDt() 9 8.786e-06 9.6e-06 1.077e-05 0.00% Castro::computeInitialDt() 2 6.609e-06 7.532e-06 9.399e-06 0.00% Amr::InitializeInit() 1 2.67e-06 4.35e-06 7.352e-06 0.00% Amr::init() 1 1.984e-06 2.697e-06 3.429e-06 0.00% Amr::initialInit() 1 1.73e-06 2.155e-06 2.5e-06 0.00% Other 203 0.01047 0.01266 0.01448 0.45% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.19 3.19 3.191 100.00% Amr::coarseTimeStep() 10 3.014 3.014 3.014 94.47% Amr::timeStep() 10 2.997 2.999 3 94.01% Castro::advance() 10 2.983 2.984 2.985 93.56% Castro::subcycle_advance_ctu() 10 2.913 2.916 2.926 91.71% Castro::do_advance_ctu() 10 2.912 2.916 2.926 91.70% Castro::construct_ctu_hydro_source() 10 2.163 2.167 2.171 68.04% Gravity::make_radial_gravity() 21 0.2998 0.3058 0.3169 9.93% AmrLevel::FillPatch() 41 0.2009 0.2091 0.2153 6.75% Gravity::get_new_grav_vector() 11 0.206 0.2067 0.2073 6.50% Castro::construct_old_gravity() 10 0.1821 0.1863 0.1961 6.15% Gravity::get_old_grav_vector() 10 0.1813 0.1856 0.1954 6.12% FillPatchIterator::Initialize 41 0.1704 0.1753 0.1893 5.93% Castro::construct_new_gravity() 10 0.1833 0.1841 0.1846 5.78% Castro::initialize_do_advance() 10 0.1742 0.1766 0.1795 5.63% check_for_negative_density() 10 0.03655 0.1063 0.1664 5.22% Amr::init() 1 0.1651 0.1657 0.1661 5.21% Amr::initialInit() 1 0.1497 0.1503 0.1507 4.72% FillPatchIterator::FillFromLevel0() 41 0.1096 0.117 0.1352 4.24% FillPatchSingleLevel 41 0.1095 0.1169 0.1351 4.23% Amr::InitializeInit() 1 0.05522 0.08962 0.1235 3.87% Amr::defBaseLevel() 1 0.05522 0.08962 0.1235 3.87% Castro::expand_state() 10 0.1105 0.1141 0.1173 3.68% Castro::clean_state() 62 0.1026 0.1044 0.1059 3.32% Castro::initData() 1 0.03854 0.07279 0.1056 3.31% Castro::estTimeStep() 21 0.03107 0.06443 0.1027 3.22% FabArray::ParallelCopy() 41 0.07741 0.08341 0.1012 3.17% Castro::do_old_sources() 10 0.09397 0.09595 0.09922 3.11% Amr::FinalizeInit() 1 0.02653 0.06065 0.09444 2.96% amrex::Copy() 193 0.068 0.08192 0.09066 2.84% FabArray::ParallelCopy_finish() 41 0.0381 0.04628 0.07159 2.24% FabArray::setVal() 143 0.05585 0.06515 0.07039 2.21% Castro::computeInitialDt() 2 0.002452 0.03659 0.07033 2.20% Castro::initialize_advance() 10 0.05591 0.06581 0.06926 2.17% Castro::computeTemp() 63 0.06271 0.06451 0.06608 2.07% Castro::do_new_sources() 10 0.058 0.0613 0.06543 2.05% Castro::reset_internal_energy(MultiFab) 63 0.04431 0.04587 0.04717 1.48% Castro::reset_internal_energy(Fab) 1008 0.04403 0.04562 0.04692 1.47% FabArray::ParallelCopy_nowait() 41 0.02951 0.03704 0.03956 1.24% StateDataPhysBCFunct::() 41 0.03127 0.03345 0.03588 1.12% StateData::FillBoundary(geom) 41 0.03116 0.03333 0.03576 1.12% Castro::normalize_species() 62 0.03399 0.03433 0.03452 1.08% Castro::finalize_do_advance() 10 0.02422 0.02871 0.03212 1.01% Castro::construct_new_source() 50 0.02812 0.0295 0.03124 0.98% Gravity::interpolate_monopole_grav() 21 0.02516 0.02553 0.02589 0.81% Castro::construct_new_gravity_source() 10 0.02219 0.02338 0.02506 0.79% Castro::post_init() 1 0.02376 0.02387 0.02402 0.75% Amr::writePlotFile() 2 0.02339 0.02344 0.02351 0.74% Castro::post_timestep() 10 0.01374 0.01413 0.01448 0.45% Castro::apply_source_to_state() 20 0.01059 0.01289 0.01405 0.44% FabArray::Saxpy() 20 0.01053 0.01283 0.01398 0.44% VisMF::Write(FabArray) 2 0.007949 0.008808 0.01326 0.42% FabArray::setDomainBndry() 41 0.008474 0.01135 0.01256 0.39% Castro::Castro() 1 0.009602 0.0107 0.01168 0.37% Castro::check_for_nan() 20 0.009404 0.01015 0.01114 0.35% MultiFab::contains_nan() 20 0.009382 0.01013 0.01111 0.35% Castro::construct_old_source() 50 0.007014 0.01006 0.01102 0.35% Castro::construct_old_gravity_source() 10 0.006942 0.009974 0.01094 0.34% Castro::computeNewDt() 9 0.00985 0.009871 0.00989 0.31% Castro::initMFs() 1 0.006121 0.006682 0.007878 0.25% Castro::enforce_min_density() 62 0.006065 0.006304 0.006647 0.21% Other 203 0.01913 0.02296 0.02595 0.81% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 4 B 6 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8647 KiB 8658 KiB 8660 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6748 KiB 6754 KiB 6756 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7121 KiB 7129 KiB 7131 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4536 KiB 4541 KiB 4557 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 233 KiB 243 KiB 248 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 15 KiB 17 KiB 22 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2795 KiB 2800 KiB 2801 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 239 KiB 243 KiB 252 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 35 KiB 38 KiB 44 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2024 KiB 2026 KiB 2027 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 82 KiB 83 KiB 83 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 72 KiB 74 KiB 78 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.09-188-g2ceecb347bea) finalized