Initializing AMReX (26.11-11-g97505cf371eb)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.11-11-g97505cf371eb) initialized Starting run at 06:21:45 UTC on 2026-11-04. Successfully read inputs file ... Castro git describe: 26.11-1-gca4aa8eac AMReX git describe: 26.11-11-g97505cf37 Microphysics git describe: 26.11-2-gf0d41297 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.0134977 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.329636735 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.314125622 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.304255892 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.302956352 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.354009757 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.277682972 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.265540713 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.264187767 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.265771569 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.26752086 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007572876 seconds Ending run at 06:21:48 UTC on 2026-11-04. Run time = 3.122281216 Run time without initialization = 2.955803421 Average number of zones advanced per microsecond: 0.887 Average number of zones advanced per microsecond per rank: 0.111 TinyProfiler total time across processes [min...avg...max]: 3.1214 ... 3.1219 ... 3.1223 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 1.8353 1.9724 2.0698 66.29% Gravity::make_radial_gravity() 21 0.2748 0.2835 0.3009 9.64% check_for_negative_density() 10 0.03354 0.1352 0.2781 8.91% Castro::initData() 1 0.03949 0.0697 0.1059 3.39% Castro::estTimeStep() 21 0.02386 0.06615 0.09948 3.19% amrex::Copy() 193 0.06403 0.08032 0.08863 2.84% FabArray::setVal() 143 0.06049 0.06652 0.07151 2.29% FabArray::ParallelCopy_finish() 41 0.04359 0.05118 0.07057 2.26% Castro::reset_internal_energy(Fab) 1008 0.04238 0.04495 0.04743 1.52% FillPatchIterator::Initialize 41 0.03713 0.03904 0.04394 1.41% FabArray::ParallelCopy_nowait() 41 0.02631 0.03727 0.04018 1.29% StateData::FillBoundary(geom) 41 0.0284 0.0334 0.0357 1.14% Castro::normalize_species() 62 0.03275 0.03333 0.03423 1.10% Castro::construct_new_gravity_source() 10 0.02245 0.02371 0.0258 0.83% Gravity::interpolate_monopole_grav() 21 0.02448 0.02498 0.02522 0.81% Castro::initialize_do_advance() 10 0.01395 0.01669 0.02518 0.81% Castro::computeTemp() 63 0.01726 0.01832 0.01901 0.61% FabArray::Saxpy() 20 0.01076 0.01265 0.01346 0.43% Castro::initialize_advance() 10 0.004253 0.01015 0.01309 0.42% MultiFab::contains_nan() 20 0.01011 0.01122 0.01246 0.40% FabArray::setDomainBndry() 41 0.007826 0.0111 0.01219 0.39% Castro::construct_old_gravity_source() 10 0.006972 0.009862 0.01084 0.35% Amr::writePlotFile() 2 0.009082 0.01035 0.01065 0.34% VisMF::Write(FabArray) 2 0.007478 0.007903 0.01032 0.33% Amr::coarseTimeStep() 10 0.001954 0.006811 0.008094 0.26% Castro::initMFs() 1 0.006178 0.006813 0.007643 0.24% Castro::finalize_do_advance() 10 0.001166 0.001937 0.00679 0.22% Castro::enforce_min_density() 62 0.006081 0.006321 0.006651 0.21% Castro::construct_new_source() 50 0.00543 0.006071 0.006342 0.20% Gravity::get_new_grav_vector() 11 0.002755 0.003521 0.003973 0.13% Gravity::get_old_grav_vector() 10 0.00216 0.002968 0.003594 0.12% main() 1 0.001807 0.00187 0.002058 0.07% AmrLevel::FillPatch() 41 0.0007954 0.0009863 0.001114 0.04% Amr::timeStep() 10 0.000143 0.0001734 0.0003112 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002415 0.000249 0.0002729 0.01% Castro::do_advance_ctu() 10 0.000149 0.0001738 0.0002001 0.01% Castro::clean_state() 62 0.0001228 0.0001471 0.0001656 0.01% FillPatchIterator::FillFromLevel0() 41 9.619e-05 0.0001082 0.0001187 0.00% Castro::Castro() 1 5.603e-05 7.799e-05 0.0001069 0.00% StateDataPhysBCFunct::() 41 8.781e-05 9.859e-05 0.0001059 0.00% Castro::do_old_sources() 10 6.329e-05 9.21e-05 0.0001029 0.00% FabArray::ParallelCopy() 41 7.512e-05 8.345e-05 9.551e-05 0.00% FillPatchSingleLevel 41 6.063e-05 7.335e-05 8.39e-05 0.00% Castro::do_new_sources() 10 4.982e-05 6.324e-05 8.183e-05 0.00% Castro::construct_old_source() 50 4.558e-05 7.135e-05 8.098e-05 0.00% Castro::advance() 10 4.272e-05 5.965e-05 7.357e-05 0.00% Castro::subcycle_advance_ctu() 10 4.242e-05 5.167e-05 6.335e-05 0.00% Castro::apply_source_to_state() 20 4.058e-05 5.098e-05 6.292e-05 0.00% Amr::FinalizeInit() 1 4.368e-06 1.215e-05 6.166e-05 0.00% Castro::construct_old_gravity() 10 3.26e-05 3.717e-05 4.038e-05 0.00% Castro::construct_new_gravity() 10 2.723e-05 3.27e-05 3.933e-05 0.00% Amr::defBaseLevel() 1 2.952e-05 3.252e-05 3.65e-05 0.00% Castro::expand_state() 10 1.816e-05 2.326e-05 2.639e-05 0.00% Castro::check_for_nan() 20 2.263e-05 2.399e-05 2.617e-05 0.00% Castro::post_timestep() 10 1.457e-05 1.642e-05 1.896e-05 0.00% Castro::computeNewDt() 9 8.844e-06 9.995e-06 1.151e-05 0.00% Castro::post_init() 1 2.665e-06 3.748e-06 9.08e-06 0.00% Castro::computeInitialDt() 2 5.675e-06 6.851e-06 8.201e-06 0.00% Amr::InitializeInit() 1 2.809e-06 3.807e-06 7.321e-06 0.00% Amr::init() 1 1.834e-06 2.36e-06 2.702e-06 0.00% Amr::initialInit() 1 1.457e-06 1.78e-06 2.312e-06 0.00% Other 203 0.009388 0.0128 0.01462 0.47% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.121 3.122 3.122 100.00% Amr::coarseTimeStep() 10 2.946 2.946 2.946 94.36% Amr::timeStep() 10 2.928 2.93 2.934 93.98% Castro::advance() 10 2.915 2.916 2.921 93.54% Castro::subcycle_advance_ctu() 10 2.842 2.846 2.863 91.68% Castro::do_advance_ctu() 10 2.842 2.846 2.862 91.68% Castro::construct_ctu_hydro_source() 10 2.123 2.127 2.132 68.29% Gravity::make_radial_gravity() 21 0.2922 0.3016 0.3148 10.08% check_for_negative_density() 10 0.03354 0.1352 0.2781 8.91% AmrLevel::FillPatch() 41 0.2009 0.2046 0.21 6.72% Gravity::get_new_grav_vector() 11 0.2036 0.2045 0.2052 6.57% Castro::construct_old_gravity() 10 0.1751 0.1814 0.1918 6.14% Gravity::get_old_grav_vector() 10 0.1742 0.1807 0.1912 6.12% Castro::construct_new_gravity() 10 0.1823 0.183 0.1839 5.89% FillPatchIterator::Initialize 41 0.168 0.1724 0.1775 5.68% Amr::init() 1 0.165 0.1657 0.1662 5.32% Castro::initialize_do_advance() 10 0.1563 0.1619 0.166 5.32% Amr::initialInit() 1 0.1514 0.1525 0.153 4.90% Amr::InitializeInit() 1 0.06049 0.09026 0.1269 4.06% Amr::defBaseLevel() 1 0.06048 0.09026 0.1269 4.06% FillPatchIterator::FillFromLevel0() 41 0.1195 0.1223 0.1257 4.03% FillPatchSingleLevel 41 0.1194 0.1222 0.1256 4.02% Castro::expand_state() 10 0.1054 0.1115 0.1163 3.72% Castro::initData() 1 0.043 0.07336 0.1092 3.50% Castro::clean_state() 62 0.09892 0.1025 0.1054 3.38% Castro::estTimeStep() 21 0.02386 0.06615 0.09948 3.19% Castro::do_old_sources() 10 0.0928 0.09556 0.09836 3.15% FabArray::ParallelCopy() 41 0.08354 0.08863 0.09705 3.11% Amr::FinalizeInit() 1 0.02515 0.06226 0.09178 2.94% amrex::Copy() 193 0.06403 0.08032 0.08863 2.84% FabArray::setVal() 143 0.06049 0.06652 0.07151 2.29% FabArray::ParallelCopy_finish() 41 0.04359 0.05118 0.07057 2.26% Castro::initialize_advance() 10 0.05472 0.0664 0.06949 2.23% Castro::computeInitialDt() 2 0.002186 0.03929 0.06869 2.20% Castro::do_new_sources() 10 0.05782 0.06153 0.06745 2.16% Castro::computeTemp() 63 0.05988 0.06352 0.06651 2.13% Castro::reset_internal_energy(MultiFab) 63 0.04262 0.0452 0.04768 1.53% Castro::reset_internal_energy(Fab) 1008 0.04238 0.04495 0.04743 1.52% FabArray::ParallelCopy_nowait() 41 0.02641 0.03736 0.04027 1.29% StateDataPhysBCFunct::() 41 0.02849 0.0335 0.0358 1.15% StateData::FillBoundary(geom) 41 0.0284 0.0334 0.0357 1.14% Castro::normalize_species() 62 0.03275 0.03333 0.03423 1.10% Castro::construct_new_source() 50 0.02835 0.02978 0.03202 1.03% Castro::finalize_do_advance() 10 0.01286 0.02001 0.02854 0.91% Castro::construct_new_gravity_source() 10 0.02245 0.02371 0.0258 0.83% Gravity::interpolate_monopole_grav() 21 0.02448 0.02498 0.02522 0.81% Castro::post_init() 1 0.02213 0.02266 0.02285 0.73% Amr::writePlotFile() 2 0.02072 0.02086 0.02132 0.68% Castro::post_timestep() 10 0.01331 0.01379 0.01405 0.45% Castro::apply_source_to_state() 20 0.0108 0.01271 0.01352 0.43% FabArray::Saxpy() 20 0.01076 0.01265 0.01346 0.43% Castro::check_for_nan() 20 0.01014 0.01124 0.01248 0.40% MultiFab::contains_nan() 20 0.01011 0.01122 0.01246 0.40% FabArray::setDomainBndry() 41 0.007826 0.0111 0.01219 0.39% Castro::Castro() 1 0.009917 0.01068 0.01155 0.37% Castro::construct_old_source() 50 0.007018 0.009933 0.01092 0.35% Castro::construct_old_gravity_source() 10 0.006972 0.009862 0.01084 0.35% VisMF::Write(FabArray) 2 0.007478 0.007903 0.01032 0.33% Castro::computeNewDt() 9 0.008801 0.008806 0.008815 0.28% Castro::initMFs() 1 0.006178 0.006813 0.007643 0.24% Castro::enforce_min_density() 62 0.006081 0.006321 0.006651 0.21% Other 203 0.01893 0.02353 0.02633 0.84% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Comms Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- The_Comms_Arena::Initialize() 8 0 B 0 B 1 B 8192 KiB 8192 KiB 8192 KiB FabArray::ParallelCopy_nowait() 656 40 KiB 43 KiB 44 KiB 2170 KiB 2170 KiB 2170 KiB --------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8644 KiB 8656 KiB 8659 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6743 KiB 6746 KiB 6748 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7120 KiB 7128 KiB 7130 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4538 KiB 4543 KiB 4556 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 237 KiB 243 KiB 252 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 15 KiB 16 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2794 KiB 2795 KiB 2797 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 238 KiB 246 KiB 256 KiB 2560 KiB 2560 KiB 2560 KiB Castro::buildMetrics() 32 2023 KiB 2026 KiB 2027 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 83 KiB 83 KiB 84 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 71 KiB 74 KiB 78 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.11-11-g97505cf371eb) finalized