Initializing AMReX (26.11-18-g21e455c381db)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.11-18-g21e455c381db) initialized Starting run at 06:35:38 UTC on 2026-11-06. Successfully read inputs file ... Castro git describe: 26.11-1-gca4aa8eac AMReX git describe: 26.11-18-g21e455c38 Microphysics git describe: 26.11-2-gf0d41297 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013398564 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.311097001 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.31491289 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.302604082 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.299143405 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.349866911 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.283299244 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.263599666 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.263204104 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.264721779 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.26503454 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007679867 seconds Ending run at 06:35:41 UTC on 2026-11-06. Run time = 3.086222243 Run time without initialization = 2.928015599 Average number of zones advanced per microsecond: 0.895 Average number of zones advanced per microsecond per rank: 0.112 TinyProfiler total time across processes [min...avg...max]: 3.0854 ... 3.0859 ... 3.0865 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 1.8876 1.9633 2.0467 66.31% Gravity::make_radial_gravity() 21 0.2759 0.2804 0.2916 9.45% check_for_negative_density() 10 0.01885 0.1069 0.1867 6.05% FabArray::ParallelCopy_finish() 41 0.03622 0.0593 0.09995 3.24% Castro::initData() 1 0.03323 0.06889 0.09881 3.20% Castro::estTimeStep() 21 0.02334 0.05954 0.09879 3.20% amrex::Copy() 193 0.06403 0.07872 0.0876 2.84% FabArray::setVal() 143 0.0625 0.06712 0.07582 2.46% FillPatchIterator::Initialize 41 0.03172 0.03981 0.0473 1.53% Castro::reset_internal_energy(Fab) 1008 0.04392 0.04558 0.04684 1.52% FabArray::ParallelCopy_nowait() 41 0.02664 0.03636 0.03929 1.27% StateData::FillBoundary(geom) 41 0.02994 0.03321 0.03645 1.18% Castro::normalize_species() 62 0.03202 0.03279 0.03363 1.09% Castro::initialize_do_advance() 10 0.01124 0.01824 0.02703 0.88% Castro::construct_new_gravity_source() 10 0.02237 0.02353 0.02589 0.84% Gravity::interpolate_monopole_grav() 21 0.02464 0.02485 0.02536 0.82% Castro::computeTemp() 63 0.01815 0.01851 0.01892 0.61% Amr::writePlotFile() 2 0.009018 0.01129 0.01383 0.45% FabArray::Saxpy() 20 0.01076 0.01264 0.01327 0.43% Castro::initialize_advance() 10 0.005314 0.009441 0.01255 0.41% Amr::coarseTimeStep() 10 0.002602 0.009857 0.0123 0.40% FabArray::setDomainBndry() 41 0.00785 0.01083 0.0122 0.40% MultiFab::contains_nan() 20 0.01024 0.01116 0.01182 0.38% Castro::construct_old_gravity_source() 10 0.007173 0.009665 0.01051 0.34% Castro::finalize_do_advance() 10 0.0006267 0.003009 0.01015 0.33% VisMF::Write(FabArray) 2 0.00625 0.007627 0.009599 0.31% Castro::initMFs() 1 0.006156 0.00668 0.007926 0.26% Castro::enforce_min_density() 62 0.006074 0.006315 0.006675 0.22% Castro::construct_new_source() 50 0.005726 0.006123 0.006356 0.21% Gravity::get_new_grav_vector() 11 0.002634 0.003591 0.004086 0.13% Gravity::get_old_grav_vector() 10 0.002312 0.003032 0.003404 0.11% main() 1 0.001686 0.002063 0.002346 0.08% AmrLevel::FillPatch() 41 0.0008367 0.001155 0.001383 0.04% Amr::timeStep() 10 0.0001371 0.0001854 0.0003635 0.01% Castro::reset_internal_energy(MultiFab) 63 0.000237 0.0002514 0.0002672 0.01% Castro::do_advance_ctu() 10 0.0001438 0.0001805 0.0002087 0.01% Castro::clean_state() 62 0.0001224 0.0001462 0.0001661 0.01% FillPatchIterator::FillFromLevel0() 41 0.0001029 0.0001093 0.0001149 0.00% StateDataPhysBCFunct::() 41 9.303e-05 0.0001021 0.0001077 0.00% Castro::do_old_sources() 10 7.638e-05 9.625e-05 0.000105 0.00% FabArray::ParallelCopy() 41 7.696e-05 8.74e-05 9.839e-05 0.00% Castro::Castro() 1 5.049e-05 7.707e-05 9.764e-05 0.00% FillPatchSingleLevel 41 6.57e-05 7.408e-05 8.329e-05 0.00% Castro::construct_old_source() 50 5.939e-05 7.394e-05 8.134e-05 0.00% Castro::do_new_sources() 10 5.86e-05 6.211e-05 6.839e-05 0.00% Amr::FinalizeInit() 1 4.036e-06 1.344e-05 6.732e-05 0.00% Castro::subcycle_advance_ctu() 10 4.355e-05 5.327e-05 6.41e-05 0.00% Castro::apply_source_to_state() 20 4.253e-05 5.172e-05 6.354e-05 0.00% Castro::advance() 10 4.773e-05 5.045e-05 5.524e-05 0.00% Amr::defBaseLevel() 1 3.06e-05 3.734e-05 5.017e-05 0.00% Castro::construct_old_gravity() 10 3.345e-05 3.934e-05 4.576e-05 0.00% Castro::construct_new_gravity() 10 3.111e-05 3.575e-05 3.994e-05 0.00% Castro::check_for_nan() 20 2.308e-05 2.561e-05 3.589e-05 0.00% Castro::expand_state() 10 2.016e-05 2.313e-05 2.592e-05 0.00% Castro::post_timestep() 10 1.448e-05 1.662e-05 1.837e-05 0.00% Castro::computeNewDt() 9 8.367e-06 1.083e-05 1.471e-05 0.00% Amr::InitializeInit() 1 2.845e-06 5.035e-06 1.078e-05 0.00% Castro::post_init() 1 2.377e-06 5.133e-06 9.457e-06 0.00% Castro::computeInitialDt() 2 5.492e-06 7.178e-06 8.163e-06 0.00% Amr::init() 1 1.577e-06 2.181e-06 2.767e-06 0.00% Amr::initialInit() 1 1.41e-06 1.818e-06 2.501e-06 0.00% Other 203 0.01031 0.0126 0.01472 0.48% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.085 3.086 3.087 100.00% Amr::coarseTimeStep() 10 2.918 2.918 2.918 94.54% Amr::timeStep() 10 2.896 2.898 2.905 94.13% Castro::advance() 10 2.882 2.884 2.891 93.66% Castro::subcycle_advance_ctu() 10 2.811 2.815 2.824 91.50% Castro::do_advance_ctu() 10 2.811 2.815 2.824 91.50% Castro::construct_ctu_hydro_source() 10 2.085 2.089 2.094 67.84% Gravity::make_radial_gravity() 21 0.2932 0.298 0.3045 9.87% AmrLevel::FillPatch() 41 0.1903 0.2117 0.2257 7.31% Gravity::get_new_grav_vector() 11 0.2025 0.2038 0.2049 6.64% FillPatchIterator::Initialize 41 0.1593 0.18 0.2 6.48% check_for_negative_density() 10 0.01885 0.1069 0.1867 6.05% Castro::construct_new_gravity() 10 0.1814 0.1824 0.1833 5.94% Castro::construct_old_gravity() 10 0.1732 0.1788 0.183 5.93% Gravity::get_old_grav_vector() 10 0.1725 0.1781 0.1823 5.91% Castro::initialize_do_advance() 10 0.1644 0.171 0.1761 5.71% FillPatchIterator::FillFromLevel0() 41 0.1025 0.1293 0.1605 5.20% FillPatchSingleLevel 41 0.1023 0.1292 0.1603 5.19% Amr::init() 1 0.1569 0.1577 0.1581 5.12% Amr::initialInit() 1 0.1433 0.144 0.1445 4.68% Castro::expand_state() 10 0.1033 0.1191 0.129 4.18% FabArray::ParallelCopy() 41 0.07094 0.09585 0.1268 4.11% Amr::InitializeInit() 1 0.05338 0.08922 0.1192 3.86% Amr::defBaseLevel() 1 0.05338 0.08921 0.1192 3.86% Castro::clean_state() 62 0.1001 0.1027 0.1048 3.40% Castro::initData() 1 0.03702 0.07251 0.1024 3.32% FabArray::ParallelCopy_finish() 41 0.03622 0.0593 0.09995 3.24% Castro::do_old_sources() 10 0.08916 0.09416 0.09913 3.21% Castro::estTimeStep() 21 0.02334 0.05954 0.09879 3.20% Amr::FinalizeInit() 1 0.02524 0.05479 0.09112 2.95% amrex::Copy() 193 0.06403 0.07872 0.0876 2.84% FabArray::setVal() 143 0.0625 0.06712 0.07582 2.46% Castro::initialize_advance() 10 0.05857 0.06563 0.07245 2.35% Castro::do_new_sources() 10 0.05862 0.06215 0.06825 2.21% Castro::computeInitialDt() 2 0.002228 0.03189 0.06812 2.21% Castro::computeTemp() 63 0.0623 0.06434 0.06565 2.13% Castro::reset_internal_energy(MultiFab) 63 0.04415 0.04583 0.04711 1.53% Castro::reset_internal_energy(Fab) 1008 0.04392 0.04558 0.04684 1.52% FabArray::ParallelCopy_nowait() 41 0.02674 0.03646 0.03937 1.28% StateDataPhysBCFunct::() 41 0.03004 0.03332 0.03655 1.18% StateData::FillBoundary(geom) 41 0.02994 0.03321 0.03645 1.18% Castro::normalize_species() 62 0.03202 0.03279 0.03363 1.09% Castro::construct_new_source() 50 0.02834 0.02965 0.03216 1.04% Castro::construct_new_gravity_source() 10 0.02237 0.02353 0.02589 0.84% Gravity::interpolate_monopole_grav() 21 0.02464 0.02485 0.02536 0.82% Castro::finalize_do_advance() 10 0.01409 0.0216 0.02384 0.77% Castro::post_init() 1 0.02234 0.02267 0.02289 0.74% Amr::writePlotFile() 2 0.02129 0.02147 0.02179 0.71% Castro::post_timestep() 10 0.01344 0.01395 0.01425 0.46% Castro::apply_source_to_state() 20 0.0108 0.01269 0.01333 0.43% FabArray::Saxpy() 20 0.01076 0.01264 0.01327 0.43% FabArray::setDomainBndry() 41 0.00785 0.01083 0.0122 0.40% Castro::check_for_nan() 20 0.01026 0.01118 0.01185 0.38% MultiFab::contains_nan() 20 0.01024 0.01116 0.01182 0.38% Castro::Castro() 1 0.009951 0.0105 0.01129 0.37% Castro::construct_old_source() 50 0.007232 0.009739 0.01059 0.34% Castro::construct_old_gravity_source() 10 0.007173 0.009665 0.01051 0.34% VisMF::Write(FabArray) 2 0.00625 0.007627 0.009599 0.31% Castro::computeNewDt() 9 0.009064 0.00908 0.009094 0.29% Castro::initMFs() 1 0.006156 0.00668 0.007926 0.26% Castro::enforce_min_density() 62 0.006074 0.006315 0.006675 0.22% Other 203 0.01927 0.02307 0.02682 0.87% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 4 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Comms Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- The_Comms_Arena::Initialize() 8 0 B 0 B 1 B 8192 KiB 8192 KiB 8192 KiB FabArray::ParallelCopy_nowait() 656 32 KiB 48 KiB 64 KiB 2170 KiB 2170 KiB 2170 KiB --------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8641 KiB 8654 KiB 8658 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6752 KiB 6759 KiB 6763 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7117 KiB 7127 KiB 7129 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4533 KiB 4544 KiB 4556 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 227 KiB 258 KiB 278 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 12 KiB 15 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2795 KiB 2796 KiB 2803 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 241 KiB 245 KiB 251 KiB 2560 KiB 2560 KiB 2560 KiB Castro::buildMetrics() 32 2023 KiB 2026 KiB 2026 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 84 KiB 84 KiB 85 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 71 KiB 73 KiB 75 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.11-18-g21e455c381db) finalized