Initializing AMReX (26.11-18-g21e455c381db)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.11-18-g21e455c381db) initialized Starting run at 13:41:34 UTC on 2026-11-08. Successfully read inputs file ... Castro git describe: 26.11-3-gf80bc9a1c AMReX git describe: 26.11-18-g21e455c38 Microphysics git describe: 26.11-3-g6480e00f reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013801241 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.318094552 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.310878705 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.317986625 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.309741736 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.355185741 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.278444065 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.260581431 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.263510214 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.264553278 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.268087249 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.006608874 seconds Ending run at 13:41:37 UTC on 2026-11-08. Run time = 3.119200684 Run time without initialization = 2.956612447 Average number of zones advanced per microsecond: 0.887 Average number of zones advanced per microsecond per rank: 0.111 TinyProfiler total time across processes [min...avg...max]: 3.1181 ... 3.1189 ... 3.1192 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 1.8432 1.9709 2.0573 65.96% Gravity::make_radial_gravity() 21 0.2805 0.2881 0.308 9.87% check_for_negative_density() 10 0.03715 0.128 0.2602 8.34% Castro::initData() 1 0.03293 0.06765 0.1001 3.21% Castro::estTimeStep() 21 0.02408 0.06092 0.09802 3.14% FabArray::ParallelCopy_finish() 41 0.03979 0.0567 0.0956 3.06% amrex::Copy() 193 0.06367 0.08043 0.08802 2.82% FabArray::setVal() 143 0.05352 0.06539 0.06993 2.24% Castro::reset_internal_energy(Fab) 1008 0.04409 0.0457 0.04806 1.54% FillPatchIterator::Initialize 41 0.0386 0.04027 0.04777 1.53% FabArray::ParallelCopy_nowait() 41 0.02746 0.03717 0.04001 1.28% StateData::FillBoundary(geom) 41 0.02889 0.03388 0.03689 1.18% Castro::normalize_species() 62 0.03265 0.03315 0.03428 1.10% Castro::initialize_do_advance() 10 0.01118 0.0171 0.02728 0.87% Gravity::interpolate_monopole_grav() 21 0.02471 0.02506 0.02528 0.81% Castro::construct_new_gravity_source() 10 0.02206 0.02323 0.0248 0.80% Castro::computeTemp() 63 0.01801 0.01858 0.01955 0.63% Castro::initialize_advance() 10 0.005277 0.01015 0.01336 0.43% FabArray::Saxpy() 20 0.01046 0.01248 0.01325 0.42% MultiFab::contains_nan() 20 0.01055 0.01143 0.01237 0.40% FabArray::setDomainBndry() 41 0.007816 0.01112 0.0123 0.39% VisMF::Write(FabArray) 2 0.007582 0.008091 0.01083 0.35% Amr::writePlotFile() 2 0.007247 0.01006 0.01072 0.34% Castro::construct_old_gravity_source() 10 0.007293 0.009691 0.01037 0.33% Castro::finalize_do_advance() 10 0.0006036 0.0021 0.009365 0.30% Amr::coarseTimeStep() 10 0.0006539 0.007614 0.008933 0.29% Castro::initMFs() 1 0.006235 0.006569 0.008463 0.27% Castro::enforce_min_density() 62 0.006015 0.006257 0.006467 0.21% Castro::construct_new_source() 50 0.005389 0.006047 0.006223 0.20% Gravity::get_new_grav_vector() 11 0.003181 0.003531 0.004329 0.14% Gravity::get_old_grav_vector() 10 0.002325 0.002998 0.003423 0.11% main() 1 0.001733 0.002197 0.002435 0.08% AmrLevel::FillPatch() 41 0.0008326 0.001188 0.001298 0.04% Amr::timeStep() 10 0.0001291 0.0001867 0.0003879 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002305 0.0002497 0.0002699 0.01% Castro::do_advance_ctu() 10 0.0001506 0.0001731 0.0001964 0.01% Amr::FinalizeInit() 1 4.8e-06 2.785e-05 0.0001766 0.01% Castro::clean_state() 62 0.0001313 0.0001401 0.0001487 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001026 0.0001121 0.0001344 0.00% Castro::do_old_sources() 10 8.244e-05 9.449e-05 0.0001217 0.00% StateDataPhysBCFunct::() 41 0.0001008 0.0001058 0.0001107 0.00% Castro::Castro() 1 5.524e-05 9.141e-05 0.000109 0.00% FabArray::ParallelCopy() 41 8.747e-05 9.11e-05 9.51e-05 0.00% FillPatchSingleLevel 41 6.939e-05 7.661e-05 8.664e-05 0.00% Castro::construct_old_source() 50 5.683e-05 6.835e-05 7.747e-05 0.00% Castro::subcycle_advance_ctu() 10 4.862e-05 5.81e-05 7.428e-05 0.00% Castro::do_new_sources() 10 5.386e-05 6.224e-05 6.764e-05 0.00% Castro::advance() 10 4.664e-05 5.555e-05 6.222e-05 0.00% Amr::defBaseLevel() 1 3.669e-05 5.02e-05 6.164e-05 0.00% Castro::apply_source_to_state() 20 4.41e-05 4.983e-05 5.543e-05 0.00% Castro::construct_old_gravity() 10 3.309e-05 3.772e-05 4.291e-05 0.00% Castro::construct_new_gravity() 10 2.907e-05 3.377e-05 4.009e-05 0.00% Castro::expand_state() 10 1.98e-05 2.37e-05 2.855e-05 0.00% Castro::check_for_nan() 20 2.248e-05 2.433e-05 2.586e-05 0.00% Castro::post_init() 1 7.227e-06 1.198e-05 2.134e-05 0.00% Castro::post_timestep() 10 1.424e-05 1.795e-05 2.006e-05 0.00% Amr::initialInit() 1 1.629e-06 3.347e-06 1.093e-05 0.00% Castro::computeNewDt() 9 8.113e-06 9.428e-06 1.043e-05 0.00% Castro::computeInitialDt() 2 5.932e-06 6.801e-06 8.091e-06 0.00% Amr::InitializeInit() 1 3.04e-06 4.646e-06 6.629e-06 0.00% Amr::init() 1 1.931e-06 2.85e-06 4.614e-06 0.00% Other 203 0.009543 0.01316 0.01503 0.48% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.118 3.119 3.119 100.00% Amr::coarseTimeStep() 10 2.948 2.948 2.948 94.50% Amr::timeStep() 10 2.929 2.93 2.937 94.16% Castro::advance() 10 2.914 2.916 2.923 93.70% Castro::subcycle_advance_ctu() 10 2.842 2.848 2.862 91.77% Castro::do_advance_ctu() 10 2.842 2.848 2.862 91.76% Castro::construct_ctu_hydro_source() 10 2.114 2.118 2.122 68.04% Gravity::make_radial_gravity() 21 0.2981 0.3056 0.3221 10.33% check_for_negative_density() 10 0.03715 0.128 0.2602 8.34% AmrLevel::FillPatch() 41 0.1971 0.2126 0.2246 7.20% Gravity::get_new_grav_vector() 11 0.2037 0.2046 0.2057 6.59% FillPatchIterator::Initialize 41 0.1646 0.1796 0.2011 6.45% Castro::construct_old_gravity() 10 0.1781 0.1861 0.2004 6.42% Gravity::get_old_grav_vector() 10 0.1774 0.1854 0.1996 6.40% Castro::construct_new_gravity() 10 0.1815 0.1819 0.1825 5.85% Castro::initialize_do_advance() 10 0.1602 0.1688 0.1756 5.63% Amr::init() 1 0.1608 0.162 0.1622 5.20% FillPatchIterator::FillFromLevel0() 41 0.1087 0.1282 0.1524 4.89% FillPatchSingleLevel 41 0.1086 0.1281 0.1523 4.88% Amr::initialInit() 1 0.1468 0.1478 0.148 4.75% Castro::expand_state() 10 0.1042 0.1177 0.1257 4.03% FabArray::ParallelCopy() 41 0.07524 0.09406 0.1233 3.95% Amr::InitializeInit() 1 0.05431 0.08891 0.1215 3.90% Amr::defBaseLevel() 1 0.0543 0.0889 0.1215 3.90% Castro::clean_state() 62 0.1009 0.1032 0.1077 3.45% Castro::initData() 1 0.03668 0.07144 0.1039 3.33% Castro::do_old_sources() 10 0.09474 0.09661 0.1003 3.22% Castro::estTimeStep() 21 0.02408 0.06092 0.09802 3.14% FabArray::ParallelCopy_finish() 41 0.03979 0.0567 0.0956 3.06% Amr::FinalizeInit() 1 0.02647 0.05891 0.09373 3.01% amrex::Copy() 193 0.06367 0.08043 0.08802 2.82% FabArray::setVal() 143 0.05352 0.06539 0.06993 2.24% Castro::initialize_advance() 10 0.04906 0.06478 0.06992 2.24% Castro::computeInitialDt() 2 0.002272 0.03469 0.06946 2.23% Castro::computeTemp() 63 0.06236 0.06454 0.06788 2.18% Castro::do_new_sources() 10 0.05758 0.06106 0.06581 2.11% Castro::reset_internal_energy(MultiFab) 63 0.04435 0.04595 0.04833 1.55% Castro::reset_internal_energy(Fab) 1008 0.04409 0.0457 0.04806 1.54% FabArray::ParallelCopy_nowait() 41 0.02757 0.03727 0.0401 1.29% StateDataPhysBCFunct::() 41 0.02899 0.03399 0.03699 1.19% StateData::FillBoundary(geom) 41 0.02889 0.03388 0.03689 1.18% Castro::normalize_species() 62 0.03265 0.03315 0.03428 1.10% Castro::construct_new_source() 50 0.02745 0.02928 0.03102 0.99% Gravity::interpolate_monopole_grav() 21 0.02471 0.02506 0.02528 0.81% Castro::construct_new_gravity_source() 10 0.02206 0.02323 0.0248 0.80% Castro::post_init() 1 0.02381 0.02393 0.02399 0.77% Castro::finalize_do_advance() 10 0.01321 0.01956 0.02224 0.71% Amr::writePlotFile() 2 0.02071 0.02092 0.02106 0.68% Castro::post_timestep() 10 0.01355 0.01397 0.01448 0.46% Castro::apply_source_to_state() 20 0.0105 0.01253 0.0133 0.43% FabArray::Saxpy() 20 0.01046 0.01248 0.01325 0.42% Castro::check_for_nan() 20 0.01058 0.01145 0.01239 0.40% MultiFab::contains_nan() 20 0.01055 0.01143 0.01237 0.40% FabArray::setDomainBndry() 41 0.007816 0.01112 0.0123 0.39% Castro::Castro() 1 0.01053 0.01084 0.0117 0.37% VisMF::Write(FabArray) 2 0.007582 0.008091 0.01083 0.35% Castro::construct_old_source() 50 0.00735 0.009759 0.01044 0.33% Castro::construct_old_gravity_source() 10 0.007293 0.009691 0.01037 0.33% Castro::computeNewDt() 9 0.008788 0.008794 0.008802 0.28% Castro::initMFs() 1 0.006235 0.006569 0.008463 0.27% Castro::enforce_min_density() 62 0.006015 0.006257 0.006467 0.21% Other 203 0.01845 0.0241 0.027 0.87% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 4 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Comms Memory Usage: --------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------- The_Comms_Arena::Initialize() 8 1 B 1 B 1 B 8192 KiB 8192 KiB 8192 KiB FabArray::ParallelCopy_nowait() 656 34 KiB 46 KiB 60 KiB 2170 KiB 2170 KiB 2170 KiB --------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8641 KiB 8654 KiB 8657 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6750 KiB 6754 KiB 6756 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7117 KiB 7126 KiB 7129 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4543 KiB 4551 KiB 4570 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 232 KiB 255 KiB 271 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 15 KiB 16 KiB 19 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2793 KiB 2798 KiB 2805 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 243 KiB 249 KiB 262 KiB 2560 KiB 2560 KiB 2560 KiB Castro::buildMetrics() 32 2023 KiB 2026 KiB 2026 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 83 KiB 84 KiB 84 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 72 KiB 76 KiB 81 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.11-18-g21e455c381db) finalized