MPI initialized with 4 MPI processes
MPI initialized with thread support level 0
AMReX (22.01-39-g874ccc6f3f8d) initialized
Calling Setup()
Calling ReadParameters()
reading extern runtime parameters ...
Calling VariableSetup()
Calling BCSetup()
Calling BaseStateGeometry::Init()
Calling Init()
Calling InitData()
initdata model_File = model.hse.cool.coulomb
model file = model.hse.cool.coulomb
reading initial model
640 points found in the initial model
6 variables found in the initial model
model file mapping, level: 0
dr of MAESTRO base state = 562500.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 365
radius at r_cutoff 205593750
Maximum HSE Error = 0.000061
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
model file mapping, level: 1
dr of MAESTRO base state = 281250.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 729
radius at r_cutoff 205171875
Maximum HSE Error = 0.500936
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
Writing plotfile reacting_bubble-2d-amr_pltInitData after InitData
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.177495345
inner sponge: r_sp , r_tp : 186468750, 224718750
Doing initial projection
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.005294276 Iter = 0 Bottom = 0
Done calling nodal solver
Writing plotfile reacting_bubble-2d-amr_pltafter_InitProj after InitProj
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.167810297
Call to firstdt for level 0 gives dt_lev = 0.0004741795922
Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795922
Call to firstdt for level 1 gives dt_lev = 0.0002743178815
Multiplying dt_lev by init_shrink; dt_lev = 0.0002743178815
Minimum firstdt over all levels = 0.0002743178815
Doing initial divu iteration #1
Calling nodal solver
MLMG: Initial rhs = 9701.860973
MLMG: Initial residual (resid0) = 9701.860973
MLMG: Final Iter. 5 resid, resid/bnorm = 0.0003239456703, 3.339005487e-08
MLMG: Timers: Solve = 0.127658419 Iter = 0.122324839 Bottom = 0.0003026
Done calling nodal solver
Call to estdt for level 0 gives dt_lev = 0.1641628699
Call to estdt for level 1 gives dt_lev = 0.1158500464
Minimum estdt over all levels = 0.1158500464
Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1158500464
Multiplying dt by init_shrink; dt = 0.1158500464
Ignoring this new dt since it's larger than the previous dt = 0.0002743178815
Writing plotfile reacting_bubble-2d-amr_pltafter_DivuIter after final DivuIter
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.175328928
Doing initial pressure iteration #1
Timestep 0 starts with TIME = 0 DT = 0.0002743178815
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1769558.576
MLMG: Initial residual (resid0) = 1769558.576
MLMG: Final Iter. 7 resid, resid/bnorm = 0.001462267133, 8.263457071e-10
MLMG: Timers: Solve = 0.062205728 Iter = 0.05563833 Bottom = 0.000350473
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1769557.1
MLMG: Initial residual (resid0) = 12562.98069
MLMG: Final Iter. 4 resid, resid/bnorm = 0.0003393813622, 1.917888731e-10
MLMG: Timers: Solve = 0.03592063 Iter = 0.032424237 Bottom = 0.000180251
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 1.293088754e+10
MLMG: Initial residual (resid0) = 1.293088754e+10
MLMG: Final Iter. 9 resid, resid/bnorm = 0.05355167389, 4.141376508e-12
MLMG: Timers: Solve = 0.223040971 Iter = 0.219132062 Bottom = 0.000606389
Done calling nodal solver
Timestep 0 ends with TIME = 0.0002743178815 DT = 0.0002743178815
Timing summary:
Advection :0.386048267 seconds
MAC Proj :0.111631189 seconds
Nodal Proj :0.271541256 seconds
Reactions :1.722246434 seconds
Misc :0.307921973 seconds
Base State :0.001442035 seconds
Time to advance time step: 2.819186053
Writing plotfile 0 after all initialization
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.154066107
Writing checkpoint 0 after all initialization
Writing checkpoint reacting_bubble_2d_chk0000000
Calling Evolve()
Timestep 1 starts with TIME = 0 DT = 0.0002743178815
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 484084.2372
MLMG: Initial residual (resid0) = 484084.2372
MLMG: Final Iter. 7 resid, resid/bnorm = 3.840929485e-05, 7.934423784e-11
MLMG: Timers: Solve = 0.060498611 Iter = 0.056974611 Bottom = 0.000342883
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 484084.2266
MLMG: Initial residual (resid0) = 15.7407683
MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002656626568, 5.487942846e-10
MLMG: Timers: Solve = 0.029050514 Iter = 0.025483597 Bottom = 0.000153948
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 3547174.998
MLMG: Initial residual (resid0) = 3547174.998
MLMG: Final Iter. 9 resid, resid/bnorm = 1.468532719e-05, 4.140006399e-12
MLMG: Timers: Solve = 0.223450376 Iter = 0.219541159 Bottom = 0.000579937
Done calling nodal solver
Timestep 1 ends with TIME = 0.0002743178815 DT = 0.0002743178815
Timing summary:
Advection :0.374651521 seconds
MAC Proj :0.102131344 seconds
Nodal Proj :0.271880655 seconds
Reactions :1.736218215 seconds
Misc :0.298256109 seconds
Base State :0.001507668 seconds
Time to advance time step: 2.809987837
Call to estdt for level 0 gives dt_lev = 0.2285161774
Call to estdt for level 1 gives dt_lev = 0.1613599181
Minimum estdt over all levels = 0.1613599181
Call to estdt at beginning of step 2 gives dt =0.1613599181
dt_growth factor limits the new dt = 0.0003017496696
Timestep 2 starts with TIME = 0.0002743178815 DT = 0.0003017496696
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 709087.2083
MLMG: Initial residual (resid0) = 709087.2083
MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005366310595, 7.567913413e-10
MLMG: Timers: Solve = 0.051617835 Iter = 0.048080778 Bottom = 0.000304329
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 709086.6226
MLMG: Initial residual (resid0) = 129230.7288
MLMG: Final Iter. 5 resid, resid/bnorm = 9.585484327e-05, 1.351807243e-10
MLMG: Timers: Solve = 0.04498303 Iter = 0.040267413 Bottom = 0.000233144
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 3903892.245
MLMG: Initial residual (resid0) = 3903892.245
MLMG: Final Iter. 9 resid, resid/bnorm = 1.621292904e-05, 4.153016534e-12
MLMG: Timers: Solve = 0.226361983 Iter = 0.222366249 Bottom = 0.000616523
Done calling nodal solver
Timestep 2 ends with TIME = 0.0005760675511 DT = 0.0003017496696
Timing summary:
Advection :0.374483101 seconds
MAC Proj :0.10920515 seconds
Nodal Proj :0.275228313 seconds
Reactions :1.724631818 seconds
Misc :0.297713254 seconds
Base State :0.001460375999 seconds
Time to advance time step: 2.781633935
Time to regrid: 0.139438511
Call to estdt for level 0 gives dt_lev = 0.2285277611
Call to estdt for level 1 gives dt_lev = 0.161379943
Minimum estdt over all levels = 0.161379943
Call to estdt at beginning of step 3 gives dt =0.161379943
dt_growth factor limits the new dt = 0.0003319246366
Timestep 3 starts with TIME = 0.0005760675511 DT = 0.0003319246366
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1070293.273
MLMG: Initial residual (resid0) = 1070293.273
MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005793987875, 5.413458183e-10
MLMG: Timers: Solve = 0.05197098 Iter = 0.048429284 Bottom = 0.000302641
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1070292.628
MLMG: Initial residual (resid0) = 47909.95923
MLMG: Final Iter. 5 resid, resid/bnorm = 0.0001436926976, 1.34255524e-10
MLMG: Timers: Solve = 0.043849545 Iter = 0.040311451 Bottom = 0.000228611
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 4294280.633
MLMG: Initial residual (resid0) = 4294280.633
MLMG: Final Iter. 9 resid, resid/bnorm = 1.779990271e-05, 4.145025495e-12
MLMG: Timers: Solve = 0.226396313 Iter = 0.222475521 Bottom = 0.00058989
Done calling nodal solver
Timestep 3 ends with TIME = 0.0009079921877 DT = 0.0003319246366
Timing summary:
Advection :0.377565487 seconds
MAC Proj :0.108310275 seconds
Nodal Proj :0.274640048 seconds
Reactions :1.722265588 seconds
Misc :0.300077664 seconds
Base State :0.001468821999 seconds
Time to advance time step: 2.783229631
Writing plotfile 3
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.163855555
Writing checkpoint 3
Writing checkpoint reacting_bubble_2d_chk0000003
Total Time: 19.57068244
Unused ParmParse Variables:
[TOP]::maestro.v(nvals = 1) :: [1]
[TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d-amr_chk]
[TOP]::amr.checkpoint_files_output(nvals = 1) :: [0]
AMReX (22.01-39-g874ccc6f3f8d) finalized