MPI initialized with 4 MPI processes
MPI initialized with thread support level 0
OMP initialized with 4 OMP threads
AMReX (22.03-8-g6bbcbbb78299) initialized
Calling Setup()
Calling ReadParameters()
reading extern runtime parameters ...
Calling VariableSetup()
Calling BCSetup()
Calling BaseStateGeometry::Init()
Calling Init()
Calling InitData()
initdata model_File = model.hse.cool.coulomb
model file = model.hse.cool.coulomb
reading initial model
640 points found in the initial model
6 variables found in the initial model
model file mapping, level: 0
dr of MAESTRO base state = 562500.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 365
radius at r_cutoff 205593750
Maximum HSE Error = 0.000061
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
Writing plotfile reacting_bubble-3d_pltInitData after InitData
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.520676997
inner sponge: r_sp , r_tp : 186468750, 224718750
Doing initial projection
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.016720904 Iter = 0 Bottom = 0
Done calling nodal solver
Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.390178008
Call to firstdt for level 0 gives dt_lev = 0.0004741795139
Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139
Minimum firstdt over all levels = 0.0004741795139
Doing initial divu iteration #1
Calling nodal solver
MLMG: Initial rhs = 2054.815795
MLMG: Initial residual (resid0) = 2054.815795
MLMG: Final Iter. 7 resid, resid/bnorm = 5.458584695e-10, 2.656483714e-13
MLMG: Timers: Solve = 1.106560223 Iter = 1.087356341 Bottom = 0.041680436
Done calling nodal solver
Call to estdt for level 0 gives dt_lev = 0.1719927642
Minimum estdt over all levels = 0.1719927642
Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642
Multiplying dt by init_shrink; dt = 0.1719927642
Ignoring this new dt since it's larger than the previous dt = 0.0004741795139
Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.359206937
Doing initial pressure iteration #1
Timestep 0 starts with TIME = 0 DT = 0.0004741795139
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 2728631.973
MLMG: Initial residual (resid0) = 2728631.973
MLMG: Final Iter. 9 resid, resid/bnorm = 0.0001348869671, 4.943391721e-11
MLMG: Timers: Solve = 0.23440577 Iter = 0.220275176 Bottom = 0.044971663
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 2728627.792
MLMG: Initial residual (resid0) = 8729.74506
MLMG: Final Iter. 5 resid, resid/bnorm = 0.0002173971152, 7.967268964e-11
MLMG: Timers: Solve = 0.153694772 Iter = 0.138037512 Bottom = 0.028498517
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 1.157552615e+10
MLMG: Initial residual (resid0) = 1.157552615e+10
MLMG: Final Iter. 7 resid, resid/bnorm = 0.004552435803, 3.932811125e-13
MLMG: Timers: Solve = 1.069118659 Iter = 1.053830879 Bottom = 0.025095955
Done calling nodal solver
Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139
Timing summary:
Advection :1.531323313 seconds
MAC Proj :0.442208599 seconds
Nodal Proj :1.162710747 seconds
Reactions :1.897473972 seconds
Misc :0.426534819 seconds
Base State :0.003447072 seconds
Time to advance time step: 5.478357691
Writing plotfile 0 after all initialization
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.378639581
Calling Evolve()
Timestep 1 starts with TIME = 0 DT = 0.0004741795139
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1308380.202
MLMG: Initial residual (resid0) = 1308380.202
MLMG: Final Iter. 9 resid, resid/bnorm = 9.498742726e-05, 7.259925449e-11
MLMG: Timers: Solve = 0.219976954 Iter = 0.207593827 Bottom = 0.039730675
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1308380.236
MLMG: Initial residual (resid0) = 0.982267248
MLMG: Final Iter. 4 resid, resid/bnorm = 3.597859904e-05, 2.749858034e-11
MLMG: Timers: Solve = 0.095123401 Iter = 0.082012263 Bottom = 0.016897168
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 5488883.985
MLMG: Initial residual (resid0) = 5488883.985
MLMG: Final Iter. 7 resid, resid/bnorm = 2.146619287e-06, 3.910848349e-13
MLMG: Timers: Solve = 1.029082821 Iter = 1.014635388 Bottom = 0.024157983
Done calling nodal solver
Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139
Timing summary:
Advection :1.384203677 seconds
MAC Proj :0.36350227 seconds
Nodal Proj :1.109652425 seconds
Reactions :1.863466752 seconds
Misc :0.435613104 seconds
Base State :0.002670466999 seconds
Time to advance time step: 5.17935554
Call to estdt for level 0 gives dt_lev = 0.2012294718
Minimum estdt over all levels = 0.2012294718
Call to estdt at beginning of step 2 gives dt =0.2012294718
dt_growth factor limits the new dt = 0.0005215974653
Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1426181.405
MLMG: Initial residual (resid0) = 1426181.405
MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001364015188, 9.564107225e-11
MLMG: Timers: Solve = 0.173745028 Iter = 0.162568753 Bottom = 0.035016357
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1426184.06
MLMG: Initial residual (resid0) = 5132.459692
MLMG: Final Iter. 6 resid, resid/bnorm = 3.046068014e-05, 2.135816896e-11
MLMG: Timers: Solve = 0.132316858 Iter = 0.120754152 Bottom = 0.025212117
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 6063789.798
MLMG: Initial residual (resid0) = 6063789.798
MLMG: Final Iter. 7 resid, resid/bnorm = 1.478344687e-06, 2.437988017e-13
MLMG: Timers: Solve = 1.017336699 Iter = 1.003048804 Bottom = 0.022680267
Done calling nodal solver
Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653
Timing summary:
Advection :1.36458991 seconds
MAC Proj :0.353245199 seconds
Nodal Proj :1.096558199 seconds
Reactions :1.869669376 seconds
Misc :0.46413739 seconds
Base State :0.00318334 seconds
Time to advance time step: 5.167128594
Call to estdt for level 0 gives dt_lev = 0.20128497
Minimum estdt over all levels = 0.20128497
Call to estdt at beginning of step 3 gives dt =0.20128497
dt_growth factor limits the new dt = 0.0005737572118
Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1597942.993
MLMG: Initial residual (resid0) = 1597942.993
MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001447975083, 9.061493987e-11
MLMG: Timers: Solve = 0.171020021 Iter = 0.159456927 Bottom = 0.03199423
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1597945.914
MLMG: Initial residual (resid0) = 5863.170735
MLMG: Final Iter. 6 resid, resid/bnorm = 3.364031477e-05, 2.105222366e-11
MLMG: Timers: Solve = 0.130585289 Iter = 0.120265094 Bottom = 0.02455539
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 6670310.291
MLMG: Initial residual (resid0) = 6670310.291
MLMG: Final Iter. 7 resid, resid/bnorm = 4.634009651e-06, 6.947217518e-13
MLMG: Timers: Solve = 1.0278095 Iter = 1.013354399 Bottom = 0.024877093
Done calling nodal solver
Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118
Timing summary:
Advection :1.356641304 seconds
MAC Proj :0.349505653 seconds
Nodal Proj :1.1029446 seconds
Reactions :1.845815887 seconds
Misc :0.461055182 seconds
Base State :0.003948762 seconds
Time to advance time step: 5.133651319
Writing plotfile 3
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.465084409
Total Time: 31.96565949
Unused ParmParse Variables:
[TOP]::maestro.v(nvals = 1) :: [1]
[TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2]
[TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk]
[TOP]::amr.checkpoint_files_output(nvals = 1) :: [0]
AMReX (22.03-8-g6bbcbbb78299) finalized