MPI initialized with 4 MPI processes
MPI initialized with thread support level 0
OMP initialized with 4 OMP threads
AMReX (22.06-20-g74183fe377df) initialized
Calling Setup()
Calling ReadParameters()
reading extern runtime parameters ...
Calling VariableSetup()
Calling BCSetup()
Calling BaseStateGeometry::Init()
Calling Init()
Calling InitData()
initdata model_File = model.hse.cool.coulomb
model file = model.hse.cool.coulomb
reading initial model
640 points found in the initial model
6 variables found in the initial model
model file mapping, level: 0
dr of MAESTRO base state = 2250000.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 91
radius at r_cutoff 205875000
Maximum HSE Error = 0.006358
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
model file mapping, level: 1
dr of MAESTRO base state = 1125000.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 182
radius at r_cutoff 205312500
Maximum HSE Error = 0.001719
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
model file mapping, level: 2
dr of MAESTRO base state = 562500.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 365
radius at r_cutoff 205593750
Maximum HSE Error = 0.000061
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
Writing plotfile reacting_bubble-3d-amr_pltInitData after InitData
inner sponge: r_sp , r_tp : 187875000, 223875000
Time to write plotfile: 0.332916561
inner sponge: r_sp , r_tp : 187875000, 223875000
Doing initial projection
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.004453646 Iter = 0 Bottom = 0
Done calling nodal solver
Writing plotfile reacting_bubble-3d-amr_pltafter_InitProj after InitProj
inner sponge: r_sp , r_tp : 187875000, 223875000
Time to write plotfile: 0.311270144
Call to firstdt for level 0 gives dt_lev = 0.001900185702
Multiplying dt_lev by init_shrink; dt_lev = 0.001900185702
Call to firstdt for level 1 gives dt_lev = 0.001145985589
Multiplying dt_lev by init_shrink; dt_lev = 0.001145985589
Call to firstdt for level 2 gives dt_lev = 0.0005809423507
Multiplying dt_lev by init_shrink; dt_lev = 0.0005809423507
Minimum firstdt over all levels = 0.0005809423507
Doing initial divu iteration #1
Calling nodal solver
MLMG: Initial rhs = 3375.753789
MLMG: Initial residual (resid0) = 3375.753789
MLMG: Final Iter. 7 resid, resid/bnorm = 2.235684647e-07, 6.622771645e-11
MLMG: Timers: Solve = 0.21250885 Iter = 0.207305837 Bottom = 0.018877634
Done calling nodal solver
Call to estdt for level 0 gives dt_lev = 0.3446506058
Call to estdt for level 1 gives dt_lev = 0.2371958412
Call to estdt for level 2 gives dt_lev = 0.166684761
Minimum estdt over all levels = 0.166684761
Call to estdt at end of istep_divu_iter = 1 gives dt = 0.166684761
Multiplying dt by init_shrink; dt = 0.166684761
Ignoring this new dt since it's larger than the previous dt = 0.0005809423507
Writing plotfile reacting_bubble-3d-amr_pltafter_DivuIter after final DivuIter
inner sponge: r_sp , r_tp : 187875000, 223875000
Time to write plotfile: 0.288592178
Doing initial pressure iteration #1
Timestep 0 starts with TIME = 0 DT = 0.0005809423507
Cell Count:
Level 0, 32768 cells
Level 1, 24576 cells
Level 2, 131072 cells
inner sponge: r_sp , r_tp : 187875000, 223875000
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 3473324.294
MLMG: Initial residual (resid0) = 3473324.294
MLMG: Final Iter. 7 resid, resid/bnorm = 0.002037218772, 5.865328427e-10
MLMG: Timers: Solve = 0.07983229 Iter = 0.074204441 Bottom = 0.022780663
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 3473321.253
MLMG: Initial residual (resid0) = 152.3725381
MLMG: Final Iter. 3 resid, resid/bnorm = 0.007682692981, 2.211915461e-09
MLMG: Timers: Solve = 0.035412955 Iter = 0.031009621 Bottom = 0.00834581
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 1.202681384e+10
MLMG: Initial residual (resid0) = 1.202681384e+10
MLMG: Final Iter. 9 resid, resid/bnorm = 0.1560553312, 1.297561709e-11
MLMG: Timers: Solve = 0.280321401 Iter = 0.276312913 Bottom = 0.025782834
Done calling nodal solver
Timestep 0 ends with TIME = 0.0005809423507 DT = 0.0005809423507
Timing summary:
Advection :0.445098894 seconds
MAC Proj :0.137731731 seconds
Nodal Proj :0.31274023 seconds
Reactions :0.341741037 seconds
Misc :0.109303977 seconds
Base State :0.004719221 seconds
Time to advance time step: 1.365510943
Writing plotfile 0 after all initialization
inner sponge: r_sp , r_tp : 187875000, 223875000
Time to write plotfile: 0.290750356
Calling Evolve()
Timestep 1 starts with TIME = 0 DT = 0.0005809423507
Cell Count:
Level 0, 32768 cells
Level 1, 24576 cells
Level 2, 131072 cells
inner sponge: r_sp , r_tp : 187875000, 223875000
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 807172.7037
MLMG: Initial residual (resid0) = 807172.7037
MLMG: Final Iter. 6 resid, resid/bnorm = 0.00574231951, 7.114115088e-09
MLMG: Timers: Solve = 0.06420621 Iter = 0.059480328 Bottom = 0.016538232
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 807172.7215
MLMG: Initial residual (resid0) = 0.8173203779
MLMG: Final Iter. 2 resid, resid/bnorm = 0.0002823990799, 3.498620213e-10
MLMG: Timers: Solve = 0.024905673 Iter = 0.02014596 Bottom = 0.004972615
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 6986896.692
MLMG: Initial residual (resid0) = 6986896.692
MLMG: Final Iter. 9 resid, resid/bnorm = 9.066035273e-05, 1.297576832e-11
MLMG: Timers: Solve = 0.269256982 Iter = 0.265318924 Bottom = 0.025692689
Done calling nodal solver
Timestep 1 ends with TIME = 0.0005809423507 DT = 0.0005809423507
Timing summary:
Advection :0.412737066 seconds
MAC Proj :0.108579918 seconds
Nodal Proj :0.295880496 seconds
Reactions :0.338837436 seconds
Misc :0.094242808 seconds
Base State :0.004414594 seconds
Time to advance time step: 1.266614721
Call to estdt for level 0 gives dt_lev = 0.4121759496
Call to estdt for level 1 gives dt_lev = 0.2828508339
Call to estdt for level 2 gives dt_lev = 0.198551117
Minimum estdt over all levels = 0.198551117
Call to estdt at beginning of step 2 gives dt =0.198551117
dt_growth factor limits the new dt = 0.0006390365858
Timestep 2 starts with TIME = 0.0005809423507 DT = 0.0006390365858
Cell Count:
Level 0, 32768 cells
Level 1, 24576 cells
Level 2, 131072 cells
inner sponge: r_sp , r_tp : 187875000, 223875000
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 862408.7998
MLMG: Initial residual (resid0) = 862408.7998
MLMG: Final Iter. 6 resid, resid/bnorm = 0.005909237312, 6.852014165e-09
MLMG: Timers: Solve = 0.067011745 Iter = 0.062274426 Bottom = 0.019096566
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 862410.8019
MLMG: Initial residual (resid0) = 10430.26037
MLMG: Final Iter. 4 resid, resid/bnorm = 0.00107695926, 1.248777564e-09
MLMG: Timers: Solve = 0.043695767 Iter = 0.038976075 Bottom = 0.010007463
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 7717168.571
MLMG: Initial residual (resid0) = 7717168.571
MLMG: Final Iter. 9 resid, resid/bnorm = 9.889912326e-05, 1.281546753e-11
MLMG: Timers: Solve = 0.26898089 Iter = 0.265041083 Bottom = 0.022517069
Done calling nodal solver
Timestep 2 ends with TIME = 0.001219978937 DT = 0.0006390365858
Timing summary:
Advection :0.410298047 seconds
MAC Proj :0.130178076 seconds
Nodal Proj :0.299361314 seconds
Reactions :0.336215758 seconds
Misc :0.089241922 seconds
Base State :0.004209994 seconds
Time to advance time step: 1.265962395
Call to estdt for level 0 gives dt_lev = 0.412322209
Call to estdt for level 1 gives dt_lev = 0.2829378846
Call to estdt for level 2 gives dt_lev = 0.1986205604
Minimum estdt over all levels = 0.1986205604
Call to estdt at beginning of step 3 gives dt =0.1986205604
dt_growth factor limits the new dt = 0.0007029402444
Timestep 3 starts with TIME = 0.001219978937 DT = 0.0007029402444
Cell Count:
Level 0, 32768 cells
Level 1, 24576 cells
Level 2, 131072 cells
inner sponge: r_sp , r_tp : 187875000, 223875000
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 978885.4044
MLMG: Initial residual (resid0) = 978885.4044
MLMG: Final Iter. 6 resid, resid/bnorm = 0.006845397409, 6.993052893e-09
MLMG: Timers: Solve = 0.045837221 Iter = 0.042679953 Bottom = 0.010532758
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 978885.824
MLMG: Initial residual (resid0) = 1095.71814
MLMG: Final Iter. 4 resid, resid/bnorm = 0.001084102874, 1.10748654e-09
MLMG: Timers: Solve = 0.031015169 Iter = 0.027876664 Bottom = 0.005613895
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 8489041.657
MLMG: Initial residual (resid0) = 8489041.657
MLMG: Final Iter. 9 resid, resid/bnorm = 0.0001069706632, 1.260102936e-11
MLMG: Timers: Solve = 0.249959961 Iter = 0.246703927 Bottom = 0.015408013
Done calling nodal solver
Timestep 3 ends with TIME = 0.001922919181 DT = 0.0007029402444
Timing summary:
Advection :0.353249839 seconds
MAC Proj :0.092118655 seconds
Nodal Proj :0.273076779 seconds
Reactions :0.337324803 seconds
Misc :0.101477921 seconds
Base State :0.004272138 seconds
Time to advance time step: 1.157658236
Writing plotfile 3
inner sponge: r_sp , r_tp : 187875000, 223875000
Time to write plotfile: 0.290688535
Total Time: 8.289936082
Unused ParmParse Variables:
[TOP]::maestro.v(nvals = 1) :: [1]
[TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d-amr_chk]
[TOP]::amr.checkpoint_files_output(nvals = 1) :: [0]
AMReX (22.06-20-g74183fe377df) finalized