MPI initialized with 4 MPI processes
MPI initialized with thread support level 0
OMP initialized with 4 OMP threads
AMReX (22.06-44-g027f2ff77fed) initialized
Calling Setup()
Calling ReadParameters()
reading extern runtime parameters ...
Calling VariableSetup()
Calling BCSetup()
Calling BaseStateGeometry::Init()
Calling Init()
Calling InitData()
initdata model_File = model.hse.cool.coulomb
model file = model.hse.cool.coulomb
reading initial model
640 points found in the initial model
6 variables found in the initial model
model file mapping, level: 0
dr of MAESTRO base state = 562500.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 365
radius at r_cutoff 205593750
Maximum HSE Error = 0.000061
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
Writing plotfile reacting_bubble-3d_pltInitData after InitData
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.48337409
inner sponge: r_sp , r_tp : 186468750, 224718750
Doing initial projection
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.017715682 Iter = 0 Bottom = 0
Done calling nodal solver
Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.428299394
Call to firstdt for level 0 gives dt_lev = 0.0004741795139
Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139
Minimum firstdt over all levels = 0.0004741795139
Doing initial divu iteration #1
Calling nodal solver
MLMG: Initial rhs = 2054.815795
MLMG: Initial residual (resid0) = 2054.815795
MLMG: Final Iter. 7 resid, resid/bnorm = 5.610925058e-10, 2.730621923e-13
MLMG: Timers: Solve = 0.99261874 Iter = 0.964471201 Bottom = 0.026974386
Done calling nodal solver
Call to estdt for level 0 gives dt_lev = 0.1719927642
Minimum estdt over all levels = 0.1719927642
Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642
Multiplying dt by init_shrink; dt = 0.1719927642
Ignoring this new dt since it's larger than the previous dt = 0.0004741795139
Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.372816665
Doing initial pressure iteration #1
Timestep 0 starts with TIME = 0 DT = 0.0004741795139
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 2728631.973
MLMG: Initial residual (resid0) = 2728631.973
MLMG: Final Iter. 9 resid, resid/bnorm = 2.146675251e-05, 7.867221642e-12
MLMG: Timers: Solve = 0.188039641 Iter = 0.175106917 Bottom = 0.031580417
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 2728627.792
MLMG: Initial residual (resid0) = 8729.745183
MLMG: Final Iter. 5 resid, resid/bnorm = 0.0002251321566, 8.250746303e-11
MLMG: Timers: Solve = 0.119376729 Iter = 0.102715938 Bottom = 0.019370029
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 1.157552615e+10
MLMG: Initial residual (resid0) = 1.157552615e+10
MLMG: Final Iter. 7 resid, resid/bnorm = 0.002851620822, 2.463491322e-13
MLMG: Timers: Solve = 0.996482761 Iter = 0.981898952 Bottom = 0.024247598
Done calling nodal solver
Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139
Timing summary:
Advection :1.520748645 seconds
MAC Proj :0.363893367 seconds
Nodal Proj :1.090860527 seconds
Reactions :1.861546496 seconds
Misc :0.432661453 seconds
Base State :0.002773755 seconds
Time to advance time step: 5.298467434
Writing plotfile 0 after all initialization
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.39734082
Calling Evolve()
Timestep 1 starts with TIME = 0 DT = 0.0004741795139
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1308380.202
MLMG: Initial residual (resid0) = 1308380.202
MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001231760689, 9.414394125e-11
MLMG: Timers: Solve = 0.203944609 Iter = 0.185484217 Bottom = 0.042240346
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1308380.236
MLMG: Initial residual (resid0) = 0.9822510997
MLMG: Final Iter. 4 resid, resid/bnorm = 3.529349124e-05, 2.697494984e-11
MLMG: Timers: Solve = 0.09567216 Iter = 0.081018183 Bottom = 0.017854605
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 5488883.985
MLMG: Initial residual (resid0) = 5488883.985
MLMG: Final Iter. 7 resid, resid/bnorm = 1.757725454e-06, 3.202336685e-13
MLMG: Timers: Solve = 0.983658966 Iter = 0.968233882 Bottom = 0.026664401
Done calling nodal solver
Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139
Timing summary:
Advection :1.539139063 seconds
MAC Proj :0.35244949 seconds
Nodal Proj :1.07757875 seconds
Reactions :1.902064529 seconds
Misc :0.437374899 seconds
Base State :0.003857893 seconds
Time to advance time step: 5.345386588
Call to estdt for level 0 gives dt_lev = 0.2012294718
Minimum estdt over all levels = 0.2012294718
Call to estdt at beginning of step 2 gives dt =0.2012294718
dt_growth factor limits the new dt = 0.0005215974653
Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1426181.405
MLMG: Initial residual (resid0) = 1426181.405
MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001356808934, 9.513578912e-11
MLMG: Timers: Solve = 0.175606995 Iter = 0.16102269 Bottom = 0.033341685
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1426184.06
MLMG: Initial residual (resid0) = 5132.4597
MLMG: Final Iter. 6 resid, resid/bnorm = 3.051774183e-05, 2.139817902e-11
MLMG: Timers: Solve = 0.135249963 Iter = 0.120750043 Bottom = 0.025732312
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 6063789.798
MLMG: Initial residual (resid0) = 6063789.798
MLMG: Final Iter. 7 resid, resid/bnorm = 1.38275588e-06, 2.280349297e-13
MLMG: Timers: Solve = 1.003372579 Iter = 0.987643944 Bottom = 0.023514881
Done calling nodal solver
Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653
Timing summary:
Advection :1.506736437 seconds
MAC Proj :0.361796625 seconds
Nodal Proj :1.098512476 seconds
Reactions :1.866604762 seconds
Misc :0.46481951 seconds
Base State :0.003067466 seconds
Time to advance time step: 5.321604489
Call to estdt for level 0 gives dt_lev = 0.20128497
Minimum estdt over all levels = 0.20128497
Call to estdt at beginning of step 3 gives dt =0.20128497
dt_growth factor limits the new dt = 0.0005737572118
Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1597942.993
MLMG: Initial residual (resid0) = 1597942.993
MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001495309989, 9.357717986e-11
MLMG: Timers: Solve = 0.169037173 Iter = 0.158217982 Bottom = 0.032322728
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1597945.914
MLMG: Initial residual (resid0) = 5863.170733
MLMG: Final Iter. 6 resid, resid/bnorm = 3.355282524e-05, 2.099747242e-11
MLMG: Timers: Solve = 0.129841785 Iter = 0.118965337 Bottom = 0.024552832
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 6670310.291
MLMG: Initial residual (resid0) = 6670310.291
MLMG: Final Iter. 7 resid, resid/bnorm = 4.373775246e-06, 6.55707914e-13
MLMG: Timers: Solve = 0.982330732 Iter = 0.966998016 Bottom = 0.025555278
Done calling nodal solver
Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118
Timing summary:
Advection :1.390319265 seconds
MAC Proj :0.349636493 seconds
Nodal Proj :1.062504391 seconds
Reactions :1.899841349 seconds
Misc :0.476069847 seconds
Base State :0.003199415 seconds
Time to advance time step: 5.201244975
Writing plotfile 3
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.676402283
Total Time: 32.23271497
Unused ParmParse Variables:
[TOP]::maestro.v(nvals = 1) :: [1]
[TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2]
[TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk]
[TOP]::amr.checkpoint_files_output(nvals = 1) :: [0]
AMReX (22.06-44-g027f2ff77fed) finalized