MPI initialized with 4 MPI processes
MPI initialized with thread support level 0
OMP initialized with 4 OMP threads
AMReX (22.10-1-g13aa4df0f5a4) initialized
Calling Setup()
Calling ReadParameters()
reading extern runtime parameters ...
Calling VariableSetup()
Calling BCSetup()
Calling BaseStateGeometry::Init()
Calling Init()
Calling InitData()
initdata model_File = model.hse.cool.coulomb
model file = model.hse.cool.coulomb
reading initial model
640 points found in the initial model
6 variables found in the initial model
model file mapping, level: 0
dr of MAESTRO base state = 2250000.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 91
radius at r_cutoff 205875000
Maximum HSE Error = 0.006358
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
model file mapping, level: 1
dr of MAESTRO base state = 1125000.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 182
radius at r_cutoff 205312500
Maximum HSE Error = 0.001719
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
model file mapping, level: 2
dr of MAESTRO base state = 562500.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 365
radius at r_cutoff 205593750
Maximum HSE Error = 0.000061
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
Writing plotfile reacting_bubble-3d-amr_pltInitData after InitData
inner sponge: r_sp , r_tp : 187875000, 223875000
Time to write plotfile: 0.314249561
inner sponge: r_sp , r_tp : 187875000, 223875000
Doing initial projection
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.004519959 Iter = 0 Bottom = 0
Done calling nodal solver
Writing plotfile reacting_bubble-3d-amr_pltafter_InitProj after InitProj
inner sponge: r_sp , r_tp : 187875000, 223875000
Time to write plotfile: 0.325663028
Call to firstdt for level 0 gives dt_lev = 0.001900185702
Multiplying dt_lev by init_shrink; dt_lev = 0.001900185702
Call to firstdt for level 1 gives dt_lev = 0.001145985589
Multiplying dt_lev by init_shrink; dt_lev = 0.001145985589
Call to firstdt for level 2 gives dt_lev = 0.0005809423507
Multiplying dt_lev by init_shrink; dt_lev = 0.0005809423507
Minimum firstdt over all levels = 0.0005809423507
Doing initial divu iteration #1
Calling nodal solver
MLMG: Initial rhs = 3375.753789
MLMG: Initial residual (resid0) = 3375.753789
MLMG: Final Iter. 7 resid, resid/bnorm = 2.235686423e-07, 6.622776904e-11
MLMG: Timers: Solve = 0.21236325 Iter = 0.206877608 Bottom = 0.019041478
Done calling nodal solver
Call to estdt for level 0 gives dt_lev = 0.3446506058
Call to estdt for level 1 gives dt_lev = 0.2371958412
Call to estdt for level 2 gives dt_lev = 0.166684761
Minimum estdt over all levels = 0.166684761
Call to estdt at end of istep_divu_iter = 1 gives dt = 0.166684761
Multiplying dt by init_shrink; dt = 0.166684761
Ignoring this new dt since it's larger than the previous dt = 0.0005809423507
Writing plotfile reacting_bubble-3d-amr_pltafter_DivuIter after final DivuIter
inner sponge: r_sp , r_tp : 187875000, 223875000
Time to write plotfile: 0.301557599
Doing initial pressure iteration #1
Timestep 0 starts with TIME = 0 DT = 0.0005809423507
Cell Count:
Level 0, 32768 cells
Level 1, 24576 cells
Level 2, 131072 cells
inner sponge: r_sp , r_tp : 187875000, 223875000
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 3473324.294
MLMG: Initial residual (resid0) = 3473324.294
MLMG: Final Iter. 7 resid, resid/bnorm = 0.00203718571, 5.865233239e-10
MLMG: Timers: Solve = 0.079992242 Iter = 0.071834215 Bottom = 0.020688525
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 3473321.253
MLMG: Initial residual (resid0) = 152.372537
MLMG: Final Iter. 3 resid, resid/bnorm = 0.007682689309, 2.211914404e-09
MLMG: Timers: Solve = 0.035885897 Iter = 0.031026691 Bottom = 0.008453909
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 1.202681384e+10
MLMG: Initial residual (resid0) = 1.202681384e+10
MLMG: Final Iter. 9 resid, resid/bnorm = 0.1560550928, 1.297559726e-11
MLMG: Timers: Solve = 0.281112531 Iter = 0.277128832 Bottom = 0.024031306
Done calling nodal solver
Timestep 0 ends with TIME = 0.0005809423507 DT = 0.0005809423507
Timing summary:
Advection :0.45504008 seconds
MAC Proj :0.139196642 seconds
Nodal Proj :0.311508586 seconds
Reactions :0.34391511 seconds
Misc :0.117340562 seconds
Base State :0.004524637 seconds
Time to advance time step: 1.388706994
Writing plotfile 0 after all initialization
inner sponge: r_sp , r_tp : 187875000, 223875000
Time to write plotfile: 0.305001218
Calling Evolve()
Timestep 1 starts with TIME = 0 DT = 0.0005809423507
Cell Count:
Level 0, 32768 cells
Level 1, 24576 cells
Level 2, 131072 cells
inner sponge: r_sp , r_tp : 187875000, 223875000
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 807172.7037
MLMG: Initial residual (resid0) = 807172.7037
MLMG: Final Iter. 6 resid, resid/bnorm = 0.005743275629, 7.115299617e-09
MLMG: Timers: Solve = 0.066653549 Iter = 0.061609099 Bottom = 0.017656666
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 807172.7215
MLMG: Initial residual (resid0) = 0.8173206137
MLMG: Final Iter. 2 resid, resid/bnorm = 0.000282469613, 3.499494042e-10
MLMG: Timers: Solve = 0.025780885 Iter = 0.020813722 Bottom = 0.005050977
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 6986896.692
MLMG: Initial residual (resid0) = 6986896.692
MLMG: Final Iter. 9 resid, resid/bnorm = 9.065802442e-05, 1.297543508e-11
MLMG: Timers: Solve = 0.271983644 Iter = 0.267814527 Bottom = 0.026390749
Done calling nodal solver
Timestep 1 ends with TIME = 0.0005809423507 DT = 0.0005809423507
Timing summary:
Advection :0.447075047 seconds
MAC Proj :0.112516652 seconds
Nodal Proj :0.299898064 seconds
Reactions :0.352534366 seconds
Misc :0.105512087 seconds
Base State :0.0046053 seconds
Time to advance time step: 1.342285015
Call to estdt for level 0 gives dt_lev = 0.4121759496
Call to estdt for level 1 gives dt_lev = 0.2828508339
Call to estdt for level 2 gives dt_lev = 0.198551117
Minimum estdt over all levels = 0.198551117
Call to estdt at beginning of step 2 gives dt =0.198551117
dt_growth factor limits the new dt = 0.0006390365858
Timestep 2 starts with TIME = 0.0005809423507 DT = 0.0006390365858
Cell Count:
Level 0, 32768 cells
Level 1, 24576 cells
Level 2, 131072 cells
inner sponge: r_sp , r_tp : 187875000, 223875000
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 862408.7998
MLMG: Initial residual (resid0) = 862408.7998
MLMG: Final Iter. 6 resid, resid/bnorm = 0.005908421939, 6.851068705e-09
MLMG: Timers: Solve = 0.068060772 Iter = 0.063088482 Bottom = 0.020098188
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 862410.8019
MLMG: Initial residual (resid0) = 10430.26037
MLMG: Final Iter. 4 resid, resid/bnorm = 0.001076966313, 1.248785742e-09
MLMG: Timers: Solve = 0.044524811 Iter = 0.039562923 Bottom = 0.010355194
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 7717168.571
MLMG: Initial residual (resid0) = 7717168.571
MLMG: Final Iter. 9 resid, resid/bnorm = 9.889516514e-05, 1.281495463e-11
MLMG: Timers: Solve = 0.269050731 Iter = 0.26487558 Bottom = 0.022941739
Done calling nodal solver
Timestep 2 ends with TIME = 0.001219978937 DT = 0.0006390365858
Timing summary:
Advection :0.425853276 seconds
MAC Proj :0.132401991 seconds
Nodal Proj :0.296014449 seconds
Reactions :0.337555667 seconds
Misc :0.09009369 seconds
Base State :0.00435234 seconds
Time to advance time step: 1.282416063
Call to estdt for level 0 gives dt_lev = 0.412322209
Call to estdt for level 1 gives dt_lev = 0.2829378846
Call to estdt for level 2 gives dt_lev = 0.1986205604
Minimum estdt over all levels = 0.1986205604
Call to estdt at beginning of step 3 gives dt =0.1986205604
dt_growth factor limits the new dt = 0.0007029402444
Timestep 3 starts with TIME = 0.001219978937 DT = 0.0007029402444
Cell Count:
Level 0, 32768 cells
Level 1, 24576 cells
Level 2, 131072 cells
inner sponge: r_sp , r_tp : 187875000, 223875000
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 978885.4044
MLMG: Initial residual (resid0) = 978885.4044
MLMG: Final Iter. 6 resid, resid/bnorm = 0.00684553152, 6.993189896e-09
MLMG: Timers: Solve = 0.069680648 Iter = 0.064626412 Bottom = 0.020221377
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 978885.824
MLMG: Initial residual (resid0) = 1095.71815
MLMG: Final Iter. 4 resid, resid/bnorm = 0.001084101319, 1.107484951e-09
MLMG: Timers: Solve = 0.045067558 Iter = 0.040193177 Bottom = 0.009732046
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 8489041.657
MLMG: Initial residual (resid0) = 8489041.657
MLMG: Final Iter. 9 resid, resid/bnorm = 0.000106970896, 1.260105679e-11
MLMG: Timers: Solve = 0.272132617 Iter = 0.268131308 Bottom = 0.02507136
Done calling nodal solver
Timestep 3 ends with TIME = 0.001922919181 DT = 0.0007029402444
Timing summary:
Advection :0.453023507 seconds
MAC Proj :0.134345248 seconds
Nodal Proj :0.299700862 seconds
Reactions :0.346866004 seconds
Misc :0.0909505 seconds
Base State :0.005116288 seconds
Time to advance time step: 1.325378849
Writing plotfile 3
inner sponge: r_sp , r_tp : 187875000, 223875000
Time to write plotfile: 0.290345864
Total Time: 8.601397255
Unused ParmParse Variables:
[TOP]::maestro.v(nvals = 1) :: [1]
[TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d-amr_chk]
[TOP]::amr.checkpoint_files_output(nvals = 1) :: [0]
AMReX (22.10-1-g13aa4df0f5a4) finalized