MPI initialized with 4 MPI processes MPI initialized with thread support level 0 OMP initialized with 4 OMP threads AMReX (22.12-6-g414d2091da47) initialized Calling Setup() Calling ReadParameters() reading extern runtime parameters ... Calling VariableSetup() Calling BCSetup() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-3d_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.629355305 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.017840562 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.528020019 Call to firstdt for level 0 gives dt_lev = 0.0004741795139 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139 Minimum firstdt over all levels = 0.0004741795139 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 2054.815795 MLMG: Initial residual (resid0) = 2054.815795 MLMG: Final Iter. 7 resid, resid/bnorm = 5.646167978e-10, 2.747773299e-13 MLMG: Timers: Solve = 1.015757225 Iter = 0.996802389 Bottom = 0.03983157 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1719927642 Minimum estdt over all levels = 0.1719927642 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642 Multiplying dt by init_shrink; dt = 0.1719927642 Ignoring this new dt since it's larger than the previous dt = 0.0004741795139 Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.540073255 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2728631.973 MLMG: Initial residual (resid0) = 2728631.973 MLMG: Final Iter. 9 resid, resid/bnorm = 4.353536311e-05, 1.595501465e-11 MLMG: Timers: Solve = 0.285272621 Iter = 0.264146067 Bottom = 0.057231297 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2728627.792 MLMG: Initial residual (resid0) = 8729.74515 MLMG: Final Iter. 6 resid, resid/bnorm = 2.47208518e-05, 9.059810896e-12 MLMG: Timers: Solve = 0.19947856 Iter = 0.183530524 Bottom = 0.036878019 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.157552615e+10 MLMG: Initial residual (resid0) = 1.157552615e+10 MLMG: Final Iter. 7 resid, resid/bnorm = 0.002704207972, 2.336142596e-13 MLMG: Timers: Solve = 0.996868303 Iter = 0.979273842 Bottom = 0.039209315 Done calling nodal solver Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :1.856960633 seconds MAC Proj :0.559133131 seconds Nodal Proj :1.097044958 seconds Reactions :2.051241272 seconds Misc :0.484783372 seconds Base State :0.005339085 seconds Time to advance time step: 6.087763797 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.500226891 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0004741795139 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1308380.202 MLMG: Initial residual (resid0) = 1308380.202 MLMG: Final Iter. 9 resid, resid/bnorm = 2.007163826e-05, 1.534083e-11 MLMG: Timers: Solve = 0.292460138 Iter = 0.270418367 Bottom = 0.062310005 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1308380.236 MLMG: Initial residual (resid0) = 0.9822533116 MLMG: Final Iter. 4 resid, resid/bnorm = 3.663900497e-05, 2.800333111e-11 MLMG: Timers: Solve = 0.146682971 Iter = 0.12396656 Bottom = 0.030918937 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 5488883.985 MLMG: Initial residual (resid0) = 5488883.985 MLMG: Final Iter. 7 resid, resid/bnorm = 1.575395363e-06, 2.870156059e-13 MLMG: Timers: Solve = 1.000116447 Iter = 0.975680487 Bottom = 0.039704947 Done calling nodal solver Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139 Timing summary: Advection :1.896221691 seconds MAC Proj :0.509319383 seconds Nodal Proj :1.105335808 seconds Reactions :2.046825089 seconds Misc :0.480454217 seconds Base State :0.003985715 seconds Time to advance time step: 6.068825343 Call to estdt for level 0 gives dt_lev = 0.2012294718 Minimum estdt over all levels = 0.2012294718 Call to estdt at beginning of step 2 gives dt =0.2012294718 dt_growth factor limits the new dt = 0.0005215974653 Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1426181.405 MLMG: Initial residual (resid0) = 1426181.405 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001363901101, 9.563307277e-11 MLMG: Timers: Solve = 0.265727286 Iter = 0.243074437 Bottom = 0.057378177 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1426184.06 MLMG: Initial residual (resid0) = 5132.459684 MLMG: Final Iter. 6 resid, resid/bnorm = 3.053515684e-05, 2.141038993e-11 MLMG: Timers: Solve = 0.20719785 Iter = 0.18214844 Bottom = 0.042852691 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6063789.798 MLMG: Initial residual (resid0) = 6063789.798 MLMG: Final Iter. 7 resid, resid/bnorm = 1.758258043e-06, 2.899602561e-13 MLMG: Timers: Solve = 1.008354877 Iter = 0.983636521 Bottom = 0.033633703 Done calling nodal solver Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653 Timing summary: Advection :1.928442254 seconds MAC Proj :0.540836203 seconds Nodal Proj :1.110640039 seconds Reactions :2.095880527 seconds Misc :0.501877399 seconds Base State :0.002888447 seconds Time to advance time step: 6.199464213 Call to estdt for level 0 gives dt_lev = 0.20128497 Minimum estdt over all levels = 0.20128497 Call to estdt at beginning of step 3 gives dt =0.20128497 dt_growth factor limits the new dt = 0.0005737572118 Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118 Cell Count: Level 0, 1327104 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1597942.993 MLMG: Initial residual (resid0) = 1597942.993 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001505032997, 9.418565011e-11 MLMG: Timers: Solve = 0.183024441 Iter = 0.163857405 Bottom = 0.037969469 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1597945.914 MLMG: Initial residual (resid0) = 5863.170741 MLMG: Final Iter. 6 resid, resid/bnorm = 3.355367858e-05, 2.099800644e-11 MLMG: Timers: Solve = 0.141518912 Iter = 0.122440835 Bottom = 0.027936285 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6670310.291 MLMG: Initial residual (resid0) = 6670310.291 MLMG: Final Iter. 7 resid, resid/bnorm = 4.402279036e-06, 6.599811468e-13 MLMG: Timers: Solve = 1.012933065 Iter = 0.990491422 Bottom = 0.028967079 Done calling nodal solver Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118 Timing summary: Advection :1.729575039 seconds MAC Proj :0.382780587 seconds Nodal Proj :1.108772493 seconds Reactions :2.063313072 seconds Misc :0.529021636 seconds Base State :0.005099225 seconds Time to advance time step: 5.836152735 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.607686576 Total Time: 35.81092233 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] AMReX (22.12-6-g414d2091da47) finalized