MPI initialized with 4 MPI processes
MPI initialized with thread support level 0
AMReX (23.03-6-g5b7fa9867d02) initialized
Calling Setup()
Calling ReadParameters()
reading extern runtime parameters ...
Calling VariableSetup()
Calling BCSetup()
Calling BaseStateGeometry::Init()
Calling Init()
Calling InitData()
initdata model_File = model.hse.cool.coulomb
model file = model.hse.cool.coulomb
reading initial model
640 points found in the initial model
6 variables found in the initial model
model file mapping, level: 0
dr of MAESTRO base state = 562500.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 365
radius at r_cutoff 205593750
Maximum HSE Error = 0.000061
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
model file mapping, level: 1
dr of MAESTRO base state = 281250.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 729
radius at r_cutoff 205171875
Maximum HSE Error = 0.500936
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
Writing plotfile reacting_bubble-2d-amr_pltInitData after InitData
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.189408316
inner sponge: r_sp , r_tp : 186468750, 224718750
Doing initial projection
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.005985857 Iter = 0 Bottom = 0
Done calling nodal solver
Writing plotfile reacting_bubble-2d-amr_pltafter_InitProj after InitProj
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.169987156
Call to firstdt for level 0 gives dt_lev = 0.0004741795922
Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795922
Call to firstdt for level 1 gives dt_lev = 0.0002743178815
Multiplying dt_lev by init_shrink; dt_lev = 0.0002743178815
Minimum firstdt over all levels = 0.0002743178815
Doing initial divu iteration #1
Calling nodal solver
MLMG: Initial rhs = 9701.860973
MLMG: Initial residual (resid0) = 9701.860973
MLMG: Final Iter. 5 resid, resid/bnorm = 0.0003239456739, 3.339005525e-08
MLMG: Timers: Solve = 0.113555808 Iter = 0.10789783 Bottom = 0.000261936
Done calling nodal solver
Call to estdt for level 0 gives dt_lev = 0.1641628699
Call to estdt for level 1 gives dt_lev = 0.1158500464
Minimum estdt over all levels = 0.1158500464
Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1158500464
Multiplying dt by init_shrink; dt = 0.1158500464
Ignoring this new dt since it's larger than the previous dt = 0.0002743178815
Writing plotfile reacting_bubble-2d-amr_pltafter_DivuIter after final DivuIter
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.171798864
Doing initial pressure iteration #1
Timestep 0 starts with TIME = 0 DT = 0.0002743178815
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1769558.576
MLMG: Initial residual (resid0) = 1769558.576
MLMG: Final Iter. 7 resid, resid/bnorm = 0.001462277933, 8.263518104e-10
MLMG: Timers: Solve = 0.058953569 Iter = 0.054512671 Bottom = 0.000299876
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1769557.1
MLMG: Initial residual (resid0) = 12562.98069
MLMG: Final Iter. 4 resid, resid/bnorm = 0.000339381435, 1.917889142e-10
MLMG: Timers: Solve = 0.036755519 Iter = 0.033782059 Bottom = 0.000168438
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 1.293088754e+10
MLMG: Initial residual (resid0) = 1.293088754e+10
MLMG: Final Iter. 9 resid, resid/bnorm = 0.05355167389, 4.141376508e-12
MLMG: Timers: Solve = 0.197392654 Iter = 0.193903152 Bottom = 0.000505532
Done calling nodal solver
Timestep 0 ends with TIME = 0.0002743178815 DT = 0.0002743178815
Timing summary:
Advection :0.373228676 seconds
MAC Proj :0.107468546 seconds
Nodal Proj :0.243400645 seconds
Reactions :1.749812781 seconds
Misc :0.317552824 seconds
Base State :0.001440116 seconds
Time to advance time step: 2.811687419
Writing plotfile 0 after all initialization
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.155652851
Writing checkpoint 0 after all initialization
Writing checkpoint reacting_bubble_2d_chk0000000
Calling Evolve()
Timestep 1 starts with TIME = 0 DT = 0.0002743178815
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 484084.2372
MLMG: Initial residual (resid0) = 484084.2372
MLMG: Final Iter. 7 resid, resid/bnorm = 3.840945643e-05, 7.934457163e-11
MLMG: Timers: Solve = 0.058407486 Iter = 0.055641682 Bottom = 0.000304395
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 484084.2266
MLMG: Initial residual (resid0) = 15.7407683
MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002649165483, 5.472530063e-10
MLMG: Timers: Solve = 0.027211691 Iter = 0.024445382 Bottom = 0.000128652
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 3547174.998
MLMG: Initial residual (resid0) = 3547174.998
MLMG: Final Iter. 9 resid, resid/bnorm = 1.468532719e-05, 4.140006399e-12
MLMG: Timers: Solve = 0.196421773 Iter = 0.192965783 Bottom = 0.000493862
Done calling nodal solver
Timestep 1 ends with TIME = 0.0002743178815 DT = 0.0002743178815
Timing summary:
Advection :0.344335626 seconds
MAC Proj :0.096199375 seconds
Nodal Proj :0.242371578 seconds
Reactions :1.726444309 seconds
Misc :0.293342673 seconds
Base State :0.001369782 seconds
Time to advance time step: 2.726644791
Call to estdt for level 0 gives dt_lev = 0.2285161774
Call to estdt for level 1 gives dt_lev = 0.1613599181
Minimum estdt over all levels = 0.1613599181
Call to estdt at beginning of step 2 gives dt =0.1613599181
dt_growth factor limits the new dt = 0.0003017496696
Timestep 2 starts with TIME = 0.0002743178815 DT = 0.0003017496696
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 709087.2083
MLMG: Initial residual (resid0) = 709087.2083
MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005366311931, 7.567915298e-10
MLMG: Timers: Solve = 0.051818778 Iter = 0.049087215 Bottom = 0.000270447
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 709086.6226
MLMG: Initial residual (resid0) = 129230.7288
MLMG: Final Iter. 5 resid, resid/bnorm = 9.58551891e-05, 1.351812121e-10
MLMG: Timers: Solve = 0.043897698 Iter = 0.041107796 Bottom = 0.000217465
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 3903892.245
MLMG: Initial residual (resid0) = 3903892.245
MLMG: Final Iter. 9 resid, resid/bnorm = 1.61905773e-05, 4.147291032e-12
MLMG: Timers: Solve = 0.204055686 Iter = 0.200605123 Bottom = 0.000549653
Done calling nodal solver
Timestep 2 ends with TIME = 0.0005760675511 DT = 0.0003017496696
Timing summary:
Advection :0.358979951 seconds
MAC Proj :0.106623033 seconds
Nodal Proj :0.25040064 seconds
Reactions :1.73602627 seconds
Misc :0.30579733 seconds
Base State :0.001406380001 seconds
Time to advance time step: 2.75823485
Time to regrid: 0.145853026
Call to estdt for level 0 gives dt_lev = 0.2285277611
Call to estdt for level 1 gives dt_lev = 0.161379943
Minimum estdt over all levels = 0.161379943
Call to estdt at beginning of step 3 gives dt =0.161379943
dt_growth factor limits the new dt = 0.0003319246366
Timestep 3 starts with TIME = 0.0005760675511 DT = 0.0003319246366
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1070293.273
MLMG: Initial residual (resid0) = 1070293.273
MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005793991131, 5.413461226e-10
MLMG: Timers: Solve = 0.052238664 Iter = 0.049341103 Bottom = 0.000282377
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1070292.628
MLMG: Initial residual (resid0) = 47909.95923
MLMG: Final Iter. 5 resid, resid/bnorm = 0.0001436923833, 1.342552303e-10
MLMG: Timers: Solve = 0.042171475 Iter = 0.039394268 Bottom = 0.000197025
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 4294280.633
MLMG: Initial residual (resid0) = 4294280.633
MLMG: Final Iter. 9 resid, resid/bnorm = 1.784274355e-05, 4.15500175e-12
MLMG: Timers: Solve = 0.195890759 Iter = 0.192421488 Bottom = 0.000485742
Done calling nodal solver
Timestep 3 ends with TIME = 0.0009079921877 DT = 0.0003319246366
Timing summary:
Advection :0.353028972 seconds
MAC Proj :0.105174443 seconds
Nodal Proj :0.241912368 seconds
Reactions :1.73288644 seconds
Misc :0.296668435 seconds
Base State :0.001394812999 seconds
Time to advance time step: 2.730066159
Writing plotfile 3
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.157249817
Writing checkpoint 3
Writing checkpoint reacting_bubble_2d_chk0000003
Total Time: 19.37850135
Unused ParmParse Variables:
[TOP]::maestro.v(nvals = 1) :: [1]
[TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d-amr_chk]
[TOP]::amr.checkpoint_files_output(nvals = 1) :: [0]
AMReX (23.03-6-g5b7fa9867d02) finalized