Initializing AMReX (23.11-4-ga7afcba3cffd)... MPI initialized with 2 MPI processes MPI initialized with thread support level 0 OMP initialized with 4 OMP threads AMReX (23.11-4-ga7afcba3cffd) initialized Calling Setup() Calling ReadParameters() reading extern runtime parameters ... Calling VariableSetup() Calling BCSetup() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = cutoff densities: low density cutoff (for mapping the model) = 1e-10 buoyancy cutoff density (for zeroing rho - rho_0, centrifugal term) = 5e-10 anelastic cutoff = 1e-10 Maximum HSE Error = 2.273736754e-13 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile RT_pltInitData after InitData Time to write plotfile: 0.068487845 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.00306101 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile RT_pltafter_InitProj after InitProj Time to write plotfile: 0.061355133 Call to firstdt for level 0 gives dt_lev = 0.0006089835859 Multiplying dt_lev by init_shrink; dt_lev = 6.089835859e-05 Minimum firstdt over all levels = 6.089835859e-05 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.002947385 Iter = 0 Bottom = 0 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.08660444773 Minimum estdt over all levels = 0.08660444773 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.08660444773 Multiplying dt by init_shrink; dt = 0.008660444773 Ignoring this new dt since it's larger than the previous dt = 6.089835859e-05 Writing plotfile RT_pltafter_DivuIter after final DivuIter Time to write plotfile: 0.059886852 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 6.089835859e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 0.002421164472 MLMG: Initial residual (resid0) = 0.002421164472 MLMG: Final Iter. 9 resid, resid/bnorm = 1.751907767e-13, 7.235806522e-11 MLMG: Timers: Solve = 0.038767994 Iter = 0.037273626 Bottom = 0.005273708 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 0.002421205691 MLMG: Initial residual (resid0) = 2.151449931e-06 MLMG: Final Iter. 7 resid, resid/bnorm = 9.927909435e-14, 4.100399017e-11 MLMG: Timers: Solve = 0.029976241 Iter = 0.028563895 Bottom = 0.00383573 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 58.12657035 MLMG: Initial residual (resid0) = 58.12657035 MLMG: Final Iter. 8 resid, resid/bnorm = 2.15578666e-11, 3.708780077e-13 MLMG: Timers: Solve = 0.058669878 Iter = 0.057110659 Bottom = 0.005056166 Done calling nodal solver Timestep 0 ends with TIME = 6.089835859e-05 DT = 6.089835859e-05 Timing summary: Advection :0.080775612 seconds MAC Proj :0.076316396 seconds Nodal Proj :0.065198768 seconds Reactions :0.006699475 seconds Misc :0.027393007 seconds Base State :0.0003908469994 seconds Time to advance time step: 0.26008434 Writing plotfile 0 after all initialization Time to write plotfile: 0.048805947 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 6.089835859e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2.394238647e-05 MLMG: Initial residual (resid0) = 2.394238647e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 3.181792236e-16, 1.328936963e-11 MLMG: Timers: Solve = 0.037083236 Iter = 0.035677318 Bottom = 0.005433141 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2.394218844e-05 MLMG: Initial residual (resid0) = 1.928423574e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 6.036511589e-16, 2.521286475e-11 MLMG: Timers: Solve = 0.03643527 Iter = 0.034980114 Bottom = 0.00470049 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003539812449 MLMG: Initial residual (resid0) = 0.003539812449 MLMG: Final Iter. 8 resid, resid/bnorm = 1.329231863e-15, 3.755091216e-13 MLMG: Timers: Solve = 0.051813285 Iter = 0.050308677 Bottom = 0.005054385 Done calling nodal solver Timestep 1 ends with TIME = 6.089835859e-05 DT = 6.089835859e-05 Timing summary: Advection :0.074480803 seconds MAC Proj :0.080599399 seconds Nodal Proj :0.057947796 seconds Reactions :0.005938847 seconds Misc :0.015388952 seconds Base State :0.0003813440005 seconds Time to advance time step: 0.237744048 Call to estdt for level 0 gives dt_lev = 0.3128878797 Minimum estdt over all levels = 0.3128878797 Call to estdt at beginning of step 2 gives dt =0.3128878797 dt_growth factor limits the new dt = 6.698819445e-05 Timestep 2 starts with TIME = 6.089835859e-05 DT = 6.698819445e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.050043585e-05 MLMG: Initial residual (resid0) = 3.050043585e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 2.284814624e-15, 7.491088439e-11 MLMG: Timers: Solve = 0.036926527 Iter = 0.035527568 Bottom = 0.005142629 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.059063412e-05 MLMG: Initial residual (resid0) = 5.66083759e-06 MLMG: Final Iter. 10 resid, resid/bnorm = 4.892627475e-16, 1.599387399e-11 MLMG: Timers: Solve = 0.040591962 Iter = 0.039119908 Bottom = 0.005329289 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003894013591 MLMG: Initial residual (resid0) = 0.003894013591 MLMG: Final Iter. 8 resid, resid/bnorm = 1.490994828e-15, 3.828940996e-13 MLMG: Timers: Solve = 0.062221506 Iter = 0.060738676 Bottom = 0.005059989 Done calling nodal solver Timestep 2 ends with TIME = 0.000127886553 DT = 6.698819445e-05 Timing summary: Advection :0.074955094 seconds MAC Proj :0.084301557 seconds Nodal Proj :0.070315872 seconds Reactions :0.006310968 seconds Misc :0.015791581 seconds Base State :0.0003804490002 seconds Time to advance time step: 0.252147952 Call to estdt for level 0 gives dt_lev = 0.3130286362 Minimum estdt over all levels = 0.3130286362 Call to estdt at beginning of step 3 gives dt =0.3130286362 dt_growth factor limits the new dt = 7.36870139e-05 Timestep 3 starts with TIME = 0.000127886553 DT = 7.36870139e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.168800511e-05 MLMG: Initial residual (resid0) = 3.168800511e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 5.650700787e-16, 1.783230205e-11 MLMG: Timers: Solve = 0.042316983 Iter = 0.040641388 Bottom = 0.005660608 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.178722337e-05 MLMG: Initial residual (resid0) = 1.012935749e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 6.833616179e-16, 2.149799653e-11 MLMG: Timers: Solve = 0.04408315 Iter = 0.042500261 Bottom = 0.005333398 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004283414244 MLMG: Initial residual (resid0) = 0.004283414244 MLMG: Final Iter. 8 resid, resid/bnorm = 1.614810716e-15, 3.769914894e-13 MLMG: Timers: Solve = 0.056144161 Iter = 0.05466132 Bottom = 0.005005649 Done calling nodal solver Timestep 3 ends with TIME = 0.0002015735669 DT = 7.36870139e-05 Timing summary: Advection :0.076107294 seconds MAC Proj :0.092941603 seconds Nodal Proj :0.062604085 seconds Reactions :0.006801137 seconds Misc :0.027568281 seconds Base State :0.0005729280003 seconds Time to advance time step: 0.266260858 Call to estdt for level 0 gives dt_lev = 0.3130285358 Minimum estdt over all levels = 0.3130285358 Call to estdt at beginning of step 4 gives dt =0.3130285358 dt_growth factor limits the new dt = 8.105571529e-05 Timestep 4 starts with TIME = 0.0002015735669 DT = 8.105571529e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.570538736e-05 MLMG: Initial residual (resid0) = 3.570538736e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 7.571110825e-16, 2.120439347e-11 MLMG: Timers: Solve = 0.042254696 Iter = 0.040801873 Bottom = 0.005617046 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.581452755e-05 MLMG: Initial residual (resid0) = 1.504387741e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 8.870129024e-16, 2.476684639e-11 MLMG: Timers: Solve = 0.041833953 Iter = 0.04035352 Bottom = 0.005295047 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004711755906 MLMG: Initial residual (resid0) = 0.004711755906 MLMG: Final Iter. 8 resid, resid/bnorm = 1.768550584e-15, 3.753485153e-13 MLMG: Timers: Solve = 0.053501363 Iter = 0.051953495 Bottom = 0.005100253 Done calling nodal solver Timestep 4 ends with TIME = 0.0002826292822 DT = 8.105571529e-05 Timing summary: Advection :0.073582583 seconds MAC Proj :0.090264787 seconds Nodal Proj :0.05959341 seconds Reactions :0.006374326 seconds Misc :0.015306481 seconds Base State :0.0003908009999 seconds Time to advance time step: 0.245359434 Call to estdt for level 0 gives dt_lev = 0.313028505 Minimum estdt over all levels = 0.313028505 Call to estdt at beginning of step 5 gives dt =0.313028505 dt_growth factor limits the new dt = 8.916128682e-05 Timestep 5 starts with TIME = 0.0002826292822 DT = 8.916128682e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 4.013180326e-05 MLMG: Initial residual (resid0) = 4.013180326e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 9.681425651e-16, 2.412407334e-11 MLMG: Timers: Solve = 0.042193677 Iter = 0.040685458 Bottom = 0.005494092 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 4.025185748e-05 MLMG: Initial residual (resid0) = 2.044985444e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 1.111036176e-15, 2.760210946e-11 MLMG: Timers: Solve = 0.041850871 Iter = 0.040358653 Bottom = 0.005241386 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.005182931901 MLMG: Initial residual (resid0) = 0.005182931901 MLMG: Final Iter. 8 resid, resid/bnorm = 1.942022931e-15, 3.746958224e-13 MLMG: Timers: Solve = 0.053372981 Iter = 0.05184767 Bottom = 0.00506596 Done calling nodal solver Timestep 5 ends with TIME = 0.000371790569 DT = 8.916128682e-05 Timing summary: Advection :0.073808389 seconds MAC Proj :0.09063759 seconds Nodal Proj :0.059527405 seconds Reactions :0.006113097 seconds Misc :0.015272208 seconds Base State :0.0003781059997 seconds Time to advance time step: 0.245599465 Writing plotfile 5 Time to write plotfile: 0.04789702 Total Time: 1.861552132 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [RT_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] AMReX (23.11-4-ga7afcba3cffd) finalized