Initializing AMReX (23.11-8-gb7408ea6e8fe)... MPI initialized with 2 MPI processes MPI initialized with thread support level 0 OMP initialized with 4 OMP threads AMReX (23.11-8-gb7408ea6e8fe) initialized Calling Setup() Calling ReadParameters() reading extern runtime parameters ... Calling VariableSetup() Calling BCSetup() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = cutoff densities: low density cutoff (for mapping the model) = 1e-10 buoyancy cutoff density (for zeroing rho - rho_0, centrifugal term) = 5e-10 anelastic cutoff = 1e-10 Maximum HSE Error = 2.273736754e-13 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile RT_pltInitData after InitData Time to write plotfile: 0.154845431 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.003565404 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile RT_pltafter_InitProj after InitProj Time to write plotfile: 0.066429927 Call to firstdt for level 0 gives dt_lev = 0.0006089835859 Multiplying dt_lev by init_shrink; dt_lev = 6.089835859e-05 Minimum firstdt over all levels = 6.089835859e-05 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.003455027 Iter = 0 Bottom = 0 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.08660444773 Minimum estdt over all levels = 0.08660444773 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.08660444773 Multiplying dt by init_shrink; dt = 0.008660444773 Ignoring this new dt since it's larger than the previous dt = 6.089835859e-05 Writing plotfile RT_pltafter_DivuIter after final DivuIter Time to write plotfile: 0.065358366 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 6.089835859e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 0.002421164472 MLMG: Initial residual (resid0) = 0.002421164472 MLMG: Final Iter. 9 resid, resid/bnorm = 1.751907767e-13, 7.235806522e-11 MLMG: Timers: Solve = 0.04948198 Iter = 0.047888061 Bottom = 0.005622901 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 0.002421205691 MLMG: Initial residual (resid0) = 2.151449931e-06 MLMG: Final Iter. 7 resid, resid/bnorm = 9.927909435e-14, 4.100399017e-11 MLMG: Timers: Solve = 0.029680155 Iter = 0.028187992 Bottom = 0.003575543 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 58.12657035 MLMG: Initial residual (resid0) = 58.12657035 MLMG: Final Iter. 8 resid, resid/bnorm = 2.15578666e-11, 3.708780077e-13 MLMG: Timers: Solve = 0.057678566 Iter = 0.056136652 Bottom = 0.004708845 Done calling nodal solver Timestep 0 ends with TIME = 6.089835859e-05 DT = 6.089835859e-05 Timing summary: Advection :0.08412293 seconds MAC Proj :0.086552848 seconds Nodal Proj :0.064188444 seconds Reactions :0.007381663 seconds Misc :0.029018841 seconds Base State :0.0004516550005 seconds Time to advance time step: 0.276025972 Writing plotfile 0 after all initialization Time to write plotfile: 0.047245861 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 6.089835859e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 2.394238647e-05 MLMG: Initial residual (resid0) = 2.394238647e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 3.181792236e-16, 1.328936963e-11 MLMG: Timers: Solve = 0.036572674 Iter = 0.035103028 Bottom = 0.005032869 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 2.394218844e-05 MLMG: Initial residual (resid0) = 1.928423574e-06 MLMG: Final Iter. 9 resid, resid/bnorm = 6.036511589e-16, 2.521286475e-11 MLMG: Timers: Solve = 0.035705169 Iter = 0.034206539 Bottom = 0.004346846 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003539812449 MLMG: Initial residual (resid0) = 0.003539812449 MLMG: Final Iter. 8 resid, resid/bnorm = 1.329231863e-15, 3.755091216e-13 MLMG: Timers: Solve = 0.051825069 Iter = 0.050353511 Bottom = 0.004689659 Done calling nodal solver Timestep 1 ends with TIME = 6.089835859e-05 DT = 6.089835859e-05 Timing summary: Advection :0.074228536 seconds MAC Proj :0.078662777 seconds Nodal Proj :0.057963611 seconds Reactions :0.005970231 seconds Misc :0.015105646 seconds Base State :0.0004035149996 seconds Time to advance time step: 0.235329348 Call to estdt for level 0 gives dt_lev = 0.3128878797 Minimum estdt over all levels = 0.3128878797 Call to estdt at beginning of step 2 gives dt =0.3128878797 dt_growth factor limits the new dt = 6.698819445e-05 Timestep 2 starts with TIME = 6.089835859e-05 DT = 6.698819445e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.050043585e-05 MLMG: Initial residual (resid0) = 3.050043585e-05 MLMG: Final Iter. 9 resid, resid/bnorm = 2.284814624e-15, 7.491088439e-11 MLMG: Timers: Solve = 0.036108038 Iter = 0.034697159 Bottom = 0.004839854 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.059063412e-05 MLMG: Initial residual (resid0) = 5.66083759e-06 MLMG: Final Iter. 10 resid, resid/bnorm = 4.892627475e-16, 1.599387399e-11 MLMG: Timers: Solve = 0.041595128 Iter = 0.038524207 Bottom = 0.005439026 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.003894013591 MLMG: Initial residual (resid0) = 0.003894013591 MLMG: Final Iter. 8 resid, resid/bnorm = 1.490994828e-15, 3.828940996e-13 MLMG: Timers: Solve = 0.054866545 Iter = 0.050689815 Bottom = 0.005087247 Done calling nodal solver Timestep 2 ends with TIME = 0.000127886553 DT = 6.698819445e-05 Timing summary: Advection :0.089765873 seconds MAC Proj :0.085148276 seconds Nodal Proj :0.070284039 seconds Reactions :0.007794697 seconds Misc :0.015631871 seconds Base State :0.0004401600006 seconds Time to advance time step: 0.269183837 Call to estdt for level 0 gives dt_lev = 0.3130286362 Minimum estdt over all levels = 0.3130286362 Call to estdt at beginning of step 3 gives dt =0.3130286362 dt_growth factor limits the new dt = 7.36870139e-05 Timestep 3 starts with TIME = 0.000127886553 DT = 7.36870139e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.168800511e-05 MLMG: Initial residual (resid0) = 3.168800511e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 5.650700787e-16, 1.783230205e-11 MLMG: Timers: Solve = 0.04143313 Iter = 0.039887224 Bottom = 0.005812398 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.178722337e-05 MLMG: Initial residual (resid0) = 1.012935749e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 6.833616179e-16, 2.149799653e-11 MLMG: Timers: Solve = 0.041052753 Iter = 0.039690514 Bottom = 0.005451418 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004283414244 MLMG: Initial residual (resid0) = 0.004283414244 MLMG: Final Iter. 8 resid, resid/bnorm = 1.614810716e-15, 3.769914894e-13 MLMG: Timers: Solve = 0.052065709 Iter = 0.050584549 Bottom = 0.005173579 Done calling nodal solver Timestep 3 ends with TIME = 0.0002015735669 DT = 7.36870139e-05 Timing summary: Advection :0.073009208 seconds MAC Proj :0.089001448 seconds Nodal Proj :0.058043623 seconds Reactions :0.007250957 seconds Misc :0.026083007 seconds Base State :0.0007522770002 seconds Time to advance time step: 0.253684961 Call to estdt for level 0 gives dt_lev = 0.3130285358 Minimum estdt over all levels = 0.3130285358 Call to estdt at beginning of step 4 gives dt =0.3130285358 dt_growth factor limits the new dt = 8.105571529e-05 Timestep 4 starts with TIME = 0.0002015735669 DT = 8.105571529e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3.570538736e-05 MLMG: Initial residual (resid0) = 3.570538736e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 7.571110825e-16, 2.120439347e-11 MLMG: Timers: Solve = 0.040999024 Iter = 0.039635104 Bottom = 0.005660552 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3.581452755e-05 MLMG: Initial residual (resid0) = 1.504387741e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 8.870129024e-16, 2.476684639e-11 MLMG: Timers: Solve = 0.040918809 Iter = 0.03957272 Bottom = 0.005405149 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.004711755906 MLMG: Initial residual (resid0) = 0.004711755906 MLMG: Final Iter. 8 resid, resid/bnorm = 1.768550584e-15, 3.753485153e-13 MLMG: Timers: Solve = 0.052131709 Iter = 0.050597181 Bottom = 0.005122447 Done calling nodal solver Timestep 4 ends with TIME = 0.0002826292822 DT = 8.105571529e-05 Timing summary: Advection :0.071294142 seconds MAC Proj :0.088384437 seconds Nodal Proj :0.057931354 seconds Reactions :0.005460363 seconds Misc :0.014327679 seconds Base State :0.000352385 seconds Time to advance time step: 0.237703576 Call to estdt for level 0 gives dt_lev = 0.313028505 Minimum estdt over all levels = 0.313028505 Call to estdt at beginning of step 5 gives dt =0.313028505 dt_growth factor limits the new dt = 8.916128682e-05 Timestep 5 starts with TIME = 0.0002826292822 DT = 8.916128682e-05 Cell Count: Level 0, 131072 cells <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 4.013180326e-05 MLMG: Initial residual (resid0) = 4.013180326e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 9.681425651e-16, 2.412407334e-11 MLMG: Timers: Solve = 0.041397968 Iter = 0.039992874 Bottom = 0.005709673 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 4.025185748e-05 MLMG: Initial residual (resid0) = 2.044985444e-05 MLMG: Final Iter. 10 resid, resid/bnorm = 1.111036176e-15, 2.760210946e-11 MLMG: Timers: Solve = 0.040915951 Iter = 0.039543582 Bottom = 0.005324067 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 0.005182931901 MLMG: Initial residual (resid0) = 0.005182931901 MLMG: Final Iter. 8 resid, resid/bnorm = 1.942022931e-15, 3.746958224e-13 MLMG: Timers: Solve = 0.052246295 Iter = 0.050715038 Bottom = 0.005090487 Done calling nodal solver Timestep 5 ends with TIME = 0.000371790569 DT = 8.916128682e-05 Timing summary: Advection :0.071192773 seconds MAC Proj :0.088721168 seconds Nodal Proj :0.058083134 seconds Reactions :0.005295731 seconds Misc :0.014335937 seconds Base State :0.0003540339999 seconds Time to advance time step: 0.237926552 Writing plotfile 5 Time to write plotfile: 0.046126651 Total Time: 1.959358719 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.check_file(nvals = 1) :: [RT_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] AMReX (23.11-8-gb7408ea6e8fe) finalized