Initializing AMReX (23.11-17-g9e35dc19489d)... MPI initialized with 4 MPI processes MPI initialized with thread support level 0 OMP initialized with 4 OMP threads AMReX (23.11-17-g9e35dc19489d) initialized Calling Setup() Calling ReadParameters() reading extern runtime parameters ... Calling VariableSetup() Calling BCSetup() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 2250000.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 91 radius at r_cutoff 205875000 Maximum HSE Error = 0.006358 (after putting initial model into base state arrays, and for density < base_cutoff_density) model file mapping, level: 1 dr of MAESTRO base state = 1125000.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 182 radius at r_cutoff 205312500 Maximum HSE Error = 0.001719 (after putting initial model into base state arrays, and for density < base_cutoff_density) model file mapping, level: 2 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-3d-amr_pltInitData after InitData inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.313725931 inner sponge: r_sp , r_tp : 187875000, 223875000 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.003949579 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-3d-amr_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.299398738 Call to firstdt for level 0 gives dt_lev = 0.001900185702 Multiplying dt_lev by init_shrink; dt_lev = 0.001900185702 Call to firstdt for level 1 gives dt_lev = 0.001145985589 Multiplying dt_lev by init_shrink; dt_lev = 0.001145985589 Call to firstdt for level 2 gives dt_lev = 0.0005809423507 Multiplying dt_lev by init_shrink; dt_lev = 0.0005809423507 Minimum firstdt over all levels = 0.0005809423507 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 3375.753789 MLMG: Initial residual (resid0) = 3375.753789 MLMG: Final Iter. 7 resid, resid/bnorm = 2.235685358e-07, 6.622773749e-11 MLMG: Timers: Solve = 0.213446838 Iter = 0.208221325 Bottom = 0.019139939 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.3446506058 Call to estdt for level 1 gives dt_lev = 0.2371958412 Call to estdt for level 2 gives dt_lev = 0.166684761 Minimum estdt over all levels = 0.166684761 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.166684761 Multiplying dt by init_shrink; dt = 0.166684761 Ignoring this new dt since it's larger than the previous dt = 0.0005809423507 Writing plotfile reacting_bubble-3d-amr_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.304145197 Doing initial pressure iteration #1 Timestep 0 starts with TIME = 0 DT = 0.0005809423507 Cell Count: Level 0, 32768 cells Level 1, 24576 cells Level 2, 131072 cells inner sponge: r_sp , r_tp : 187875000, 223875000 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3473324.294 MLMG: Initial residual (resid0) = 3473324.294 MLMG: Final Iter. 7 resid, resid/bnorm = 0.002037166618, 5.865178271e-10 MLMG: Timers: Solve = 0.077995242 Iter = 0.071850812 Bottom = 0.020049527 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3473321.253 MLMG: Initial residual (resid0) = 152.3725368 MLMG: Final Iter. 3 resid, resid/bnorm = 0.007682691138, 2.211914931e-09 MLMG: Timers: Solve = 0.035701312 Iter = 0.031112537 Bottom = 0.008425136 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.202681384e+10 MLMG: Initial residual (resid0) = 1.202681384e+10 MLMG: Final Iter. 9 resid, resid/bnorm = 0.156047821, 1.297499263e-11 MLMG: Timers: Solve = 0.27320605 Iter = 0.269152911 Bottom = 0.025785351 Done calling nodal solver Timestep 0 ends with TIME = 0.0005809423507 DT = 0.0005809423507 Timing summary: Advection :0.443886221 seconds MAC Proj :0.136392136 seconds Nodal Proj :0.308974042 seconds Reactions :0.375616458 seconds Misc :0.101228073 seconds Base State :0.004329905 seconds Time to advance time step: 1.383704128 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.309334059 Calling Evolve() Timestep 1 starts with TIME = 0 DT = 0.0005809423507 Cell Count: Level 0, 32768 cells Level 1, 24576 cells Level 2, 131072 cells inner sponge: r_sp , r_tp : 187875000, 223875000 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 807172.7037 MLMG: Initial residual (resid0) = 807172.7037 MLMG: Final Iter. 6 resid, resid/bnorm = 0.005742941168, 7.114885255e-09 MLMG: Timers: Solve = 0.048779032 Iter = 0.045061822 Bottom = 0.011188069 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 807172.7215 MLMG: Initial residual (resid0) = 0.8173236533 MLMG: Final Iter. 2 resid, resid/bnorm = 0.0002825022384, 3.499898236e-10 MLMG: Timers: Solve = 0.01927334 Iter = 0.015583464 Bottom = 0.003721895 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6986896.692 MLMG: Initial residual (resid0) = 6986896.692 MLMG: Final Iter. 9 resid, resid/bnorm = 9.065854829e-05, 1.297551006e-11 MLMG: Timers: Solve = 0.257112993 Iter = 0.253690181 Bottom = 0.017701963 Done calling nodal solver Timestep 1 ends with TIME = 0.0005809423507 DT = 0.0005809423507 Timing summary: Advection :0.388974326 seconds MAC Proj :0.084525081 seconds Nodal Proj :0.281881554 seconds Reactions :0.37375697 seconds Misc :0.109021731 seconds Base State :0.004148354001 seconds Time to advance time step: 1.257026127 Call to estdt for level 0 gives dt_lev = 0.4121759496 Call to estdt for level 1 gives dt_lev = 0.2828508339 Call to estdt for level 2 gives dt_lev = 0.198551117 Minimum estdt over all levels = 0.198551117 Call to estdt at beginning of step 2 gives dt =0.198551117 dt_growth factor limits the new dt = 0.0006390365858 Timestep 2 starts with TIME = 0.0005809423507 DT = 0.0006390365858 Cell Count: Level 0, 32768 cells Level 1, 24576 cells Level 2, 131072 cells inner sponge: r_sp , r_tp : 187875000, 223875000 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 862408.7998 MLMG: Initial residual (resid0) = 862408.7998 MLMG: Final Iter. 6 resid, resid/bnorm = 0.00590867165, 6.851358255e-09 MLMG: Timers: Solve = 0.050419375 Iter = 0.04681845 Bottom = 0.013038624 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 862410.8019 MLMG: Initial residual (resid0) = 10430.26037 MLMG: Final Iter. 4 resid, resid/bnorm = 0.001076960903, 1.248779469e-09 MLMG: Timers: Solve = 0.032980304 Iter = 0.029349491 Bottom = 0.006608665 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 7717168.571 MLMG: Initial residual (resid0) = 7717168.571 MLMG: Final Iter. 9 resid, resid/bnorm = 9.88986576e-05, 1.281540719e-11 MLMG: Timers: Solve = 0.255045228 Iter = 0.25157967 Bottom = 0.017256601 Done calling nodal solver Timestep 2 ends with TIME = 0.001219978937 DT = 0.0006390365858 Timing summary: Advection :0.36850531 seconds MAC Proj :0.099783212 seconds Nodal Proj :0.279349946 seconds Reactions :0.367296868 seconds Misc :0.087599669 seconds Base State :0.003830752001 seconds Time to advance time step: 1.20300653 Call to estdt for level 0 gives dt_lev = 0.412322209 Call to estdt for level 1 gives dt_lev = 0.2829378846 Call to estdt for level 2 gives dt_lev = 0.1986205604 Minimum estdt over all levels = 0.1986205604 Call to estdt at beginning of step 3 gives dt =0.1986205604 dt_growth factor limits the new dt = 0.0007029402444 Timestep 3 starts with TIME = 0.001219978937 DT = 0.0007029402444 Cell Count: Level 0, 32768 cells Level 1, 24576 cells Level 2, 131072 cells inner sponge: r_sp , r_tp : 187875000, 223875000 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 978885.4044 MLMG: Initial residual (resid0) = 978885.4044 MLMG: Final Iter. 6 resid, resid/bnorm = 0.006845941301, 6.993608517e-09 MLMG: Timers: Solve = 0.05306637 Iter = 0.049247728 Bottom = 0.013467033 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 978885.824 MLMG: Initial residual (resid0) = 1095.718157 MLMG: Final Iter. 4 resid, resid/bnorm = 0.001084101716, 1.107485356e-09 MLMG: Timers: Solve = 0.033088233 Iter = 0.029438877 Bottom = 0.006249722 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 8489041.657 MLMG: Initial residual (resid0) = 8489041.657 MLMG: Final Iter. 9 resid, resid/bnorm = 0.0001069729915, 1.260130363e-11 MLMG: Timers: Solve = 0.253622297 Iter = 0.250133186 Bottom = 0.016580862 Done calling nodal solver Timestep 3 ends with TIME = 0.001922919181 DT = 0.0007029402444 Timing summary: Advection :0.374287525 seconds MAC Proj :0.102548955 seconds Nodal Proj :0.277920917 seconds Reactions :0.37588149 seconds Misc :0.08830426 seconds Base State :0.004182113 seconds Time to advance time step: 1.219417484 Writing plotfile 3 inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.292908339 Total Time: 8.264486231 Unused ParmParse Variables: [TOP]::maestro.v(nvals = 1) :: [1] [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d-amr_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] AMReX (23.11-17-g9e35dc19489d) finalized