Initializing AMReX (23.11-20-g4b8dd0373188)...
MPI initialized with 4 MPI processes
MPI initialized with thread support level 0
AMReX (23.11-20-g4b8dd0373188) initialized
Calling Setup()
Calling ReadParameters()
reading extern runtime parameters ...
Calling VariableSetup()
Calling BCSetup()
Calling BaseStateGeometry::Init()
Calling Init()
Calling InitData()
initdata model_File = model.hse.cool.coulomb
model file = model.hse.cool.coulomb
reading initial model
640 points found in the initial model
6 variables found in the initial model
model file mapping, level: 0
dr of MAESTRO base state = 562500.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 365
radius at r_cutoff 205593750
Maximum HSE Error = 0.000061
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
model file mapping, level: 1
dr of MAESTRO base state = 281250.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 729
radius at r_cutoff 205171875
Maximum HSE Error = 0.500936
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
Writing plotfile reacting_bubble-2d-amr_pltInitData after InitData
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.203974407
inner sponge: r_sp , r_tp : 186468750, 224718750
Doing initial projection
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.005533485 Iter = 0 Bottom = 0
Done calling nodal solver
Writing plotfile reacting_bubble-2d-amr_pltafter_InitProj after InitProj
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.217266034
Call to firstdt for level 0 gives dt_lev = 0.0004741795922
Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795922
Call to firstdt for level 1 gives dt_lev = 0.0002743178815
Multiplying dt_lev by init_shrink; dt_lev = 0.0002743178815
Minimum firstdt over all levels = 0.0002743178815
Doing initial divu iteration #1
Calling nodal solver
MLMG: Initial rhs = 9701.860972
MLMG: Initial residual (resid0) = 9701.860972
MLMG: Final Iter. 5 resid, resid/bnorm = 0.0003239456489, 3.339005267e-08
MLMG: Timers: Solve = 0.110974899 Iter = 0.104904575 Bottom = 0.000241823
Done calling nodal solver
Call to estdt for level 0 gives dt_lev = 0.1641628699
Call to estdt for level 1 gives dt_lev = 0.1158500464
Minimum estdt over all levels = 0.1158500464
Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1158500464
Multiplying dt by init_shrink; dt = 0.1158500464
Ignoring this new dt since it's larger than the previous dt = 0.0002743178815
Writing plotfile reacting_bubble-2d-amr_pltafter_DivuIter after final DivuIter
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.151032764
Doing initial pressure iteration #1
Timestep 0 starts with TIME = 0 DT = 0.0002743178815
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1769558.576
MLMG: Initial residual (resid0) = 1769558.576
MLMG: Final Iter. 7 resid, resid/bnorm = 0.001462300098, 8.26364336e-10
MLMG: Timers: Solve = 0.064184375 Iter = 0.058415012 Bottom = 0.000246392
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1769557.1
MLMG: Initial residual (resid0) = 12562.98068
MLMG: Final Iter. 4 resid, resid/bnorm = 0.0003393801917, 1.917882116e-10
MLMG: Timers: Solve = 0.037736592 Iter = 0.03382415 Bottom = 0.00013456
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 1.293088754e+10
MLMG: Initial residual (resid0) = 1.293088754e+10
MLMG: Final Iter. 9 resid, resid/bnorm = 0.05363941193, 4.14816166e-12
MLMG: Timers: Solve = 0.194443984 Iter = 0.190491045 Bottom = 0.000472852
Done calling nodal solver
Timestep 0 ends with TIME = 0.0002743178815 DT = 0.0002743178815
Timing summary:
Advection :0.417726649 seconds
MAC Proj :0.11636374 seconds
Nodal Proj :0.245411172 seconds
Reactions :1.688835712 seconds
Misc :0.304736297 seconds
Base State :0.002188258001 seconds
Time to advance time step: 2.799913539
Writing plotfile 0 after all initialization
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.124963442
Writing checkpoint 0 after all initialization
Writing checkpoint reacting_bubble_2d_chk0000000
Calling Evolve()
Timestep 1 starts with TIME = 0 DT = 0.0002743178815
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 484084.2372
MLMG: Initial residual (resid0) = 484084.2372
MLMG: Final Iter. 7 resid, resid/bnorm = 3.840942577e-05, 7.934450828e-11
MLMG: Timers: Solve = 0.063091657 Iter = 0.058977413 Bottom = 0.000244124
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 484084.2266
MLMG: Initial residual (resid0) = 15.74076829
MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002653331516, 5.481136072e-10
MLMG: Timers: Solve = 0.031496934 Iter = 0.027478152 Bottom = 0.000106863
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 3547174.998
MLMG: Initial residual (resid0) = 3547174.998
MLMG: Final Iter. 9 resid, resid/bnorm = 1.473189332e-05, 4.153134065e-12
MLMG: Timers: Solve = 0.197389105 Iter = 0.193315496 Bottom = 0.000466836
Done calling nodal solver
Timestep 1 ends with TIME = 0.0002743178815 DT = 0.0002743178815
Timing summary:
Advection :0.414984175 seconds
MAC Proj :0.108253974 seconds
Nodal Proj :0.250394797 seconds
Reactions :1.699883423 seconds
Misc :0.29048498 seconds
Base State :0.002322568001 seconds
Time to advance time step: 2.790708294
Call to estdt for level 0 gives dt_lev = 0.2285161774
Call to estdt for level 1 gives dt_lev = 0.1613599181
Minimum estdt over all levels = 0.1613599181
Call to estdt at beginning of step 2 gives dt =0.1613599181
dt_growth factor limits the new dt = 0.0003017496696
Timestep 2 starts with TIME = 0.0002743178815 DT = 0.0003017496696
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 709087.2083
MLMG: Initial residual (resid0) = 709087.2083
MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005366311597, 7.567914826e-10
MLMG: Timers: Solve = 0.056365566 Iter = 0.052284702 Bottom = 0.000233132
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 709086.6226
MLMG: Initial residual (resid0) = 129230.7288
MLMG: Final Iter. 5 resid, resid/bnorm = 9.585531427e-05, 1.351813886e-10
MLMG: Timers: Solve = 0.046340428 Iter = 0.042055965 Bottom = 0.000162904
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 3903892.245
MLMG: Initial residual (resid0) = 3903892.245
MLMG: Final Iter. 9 resid, resid/bnorm = 1.616263762e-05, 4.140134155e-12
MLMG: Timers: Solve = 0.193703571 Iter = 0.189740815 Bottom = 0.000422
Done calling nodal solver
Timestep 2 ends with TIME = 0.0005760675511 DT = 0.0003017496696
Timing summary:
Advection :0.393378601 seconds
MAC Proj :0.116211248 seconds
Nodal Proj :0.242485393 seconds
Reactions :1.699922853 seconds
Misc :0.290293246 seconds
Base State :0.001572446 seconds
Time to advance time step: 2.742796948
Time to regrid: 0.132451369
Call to estdt for level 0 gives dt_lev = 0.2285277611
Call to estdt for level 1 gives dt_lev = 0.161379943
Minimum estdt over all levels = 0.161379943
Call to estdt at beginning of step 3 gives dt =0.161379943
dt_growth factor limits the new dt = 0.0003319246366
Timestep 3 starts with TIME = 0.0005760675511 DT = 0.0003319246366
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1070293.273
MLMG: Initial residual (resid0) = 1070293.273
MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005793996788, 5.413466511e-10
MLMG: Timers: Solve = 0.053361618 Iter = 0.049396448 Bottom = 0.00020527
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1070292.628
MLMG: Initial residual (resid0) = 47909.95923
MLMG: Final Iter. 5 resid, resid/bnorm = 0.0001436927053, 1.342555312e-10
MLMG: Timers: Solve = 0.045742763 Iter = 0.041757762 Bottom = 0.000152401
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 4294280.633
MLMG: Initial residual (resid0) = 4294280.633
MLMG: Final Iter. 9 resid, resid/bnorm = 1.77831389e-05, 4.141121743e-12
MLMG: Timers: Solve = 0.193399376 Iter = 0.189409188 Bottom = 0.000432
Done calling nodal solver
Timestep 3 ends with TIME = 0.0009079921877 DT = 0.0003319246366
Timing summary:
Advection :0.37602585 seconds
MAC Proj :0.112479849 seconds
Nodal Proj :0.242090793 seconds
Reactions :1.67158298 seconds
Misc :0.285638424 seconds
Base State :0.001507447 seconds
Time to advance time step: 2.68822034
Writing plotfile 3
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.157059565
Writing checkpoint 3
Writing checkpoint reacting_bubble_2d_chk0000003
Total Time: 19.29992169
Unused ParmParse Variables:
[TOP]::maestro.v(nvals = 1) :: [1]
[TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d-amr_chk]
[TOP]::amr.checkpoint_files_output(nvals = 1) :: [0]
AMReX (23.11-20-g4b8dd0373188) finalized