Initializing AMReX (24.10-11-g62c2a81eac78)... MPI initialized with 4 MPI processes MPI initialized with thread support level 0 OMP initialized with 4 OMP threads AMReX (24.10-11-g62c2a81eac78) initialized Calling Setup() Calling ReadParameters() reading extern runtime parameters ... Calling VariableSetup() Calling BCSetup() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 2250000.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 91 radius at r_cutoff 205875000 Maximum HSE Error = 0.006358 (after putting initial model into base state arrays, and for density < base_cutoff_density) model file mapping, level: 1 dr of MAESTRO base state = 1125000.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 182 radius at r_cutoff 205312500 Maximum HSE Error = 0.001719 (after putting initial model into base state arrays, and for density < base_cutoff_density) model file mapping, level: 2 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-3d-amr_pltInitData after InitData inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.298563073 inner sponge: r_sp , r_tp : 187875000, 223875000 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.005618042 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-3d-amr_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.289827712 Call to firstdt for level 0 gives dt_lev = 0.001900185702 Multiplying dt_lev by init_shrink; dt_lev = 0.001900185702 Call to firstdt for level 1 gives dt_lev = 0.001145985589 Multiplying dt_lev by init_shrink; dt_lev = 0.001145985589 Call to firstdt for level 2 gives dt_lev = 0.0005809423507 Multiplying dt_lev by init_shrink; dt_lev = 0.0005809423507 Minimum firstdt over all levels = 0.0005809423507 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 3375.753789 MLMG: Initial residual (resid0) = 3375.753789 MLMG: Final Iter. 7 resid, resid/bnorm = 2.235685923e-07, 6.622775424e-11 MLMG: Timers: Solve = 0.166656199 Iter = 0.163233031 Bottom = 0.017212376 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.3446506058 Call to estdt for level 1 gives dt_lev = 0.2371958412 Call to estdt for level 2 gives dt_lev = 0.166684761 Minimum estdt over all levels = 0.166684761 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.166684761 Multiplying dt by init_shrink; dt = 0.166684761 Ignoring this new dt since it's larger than the previous dt = 0.0005809423507 Writing plotfile reacting_bubble-3d-amr_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.272050532 Doing initial pressure iteration #1  Timestep 0 starts with TIME = 0 DT = 0.0005809423507 Cell Count: Level 0, 32768 cells Level 1, 24576 cells Level 2, 131072 cells inner sponge: r_sp , r_tp : 187875000, 223875000 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3473324.294 MLMG: Initial residual (resid0) = 3473324.294 MLMG: Final Iter. 7 resid, resid/bnorm = 0.002037215047, 5.865317702e-10 MLMG: Timers: Solve = 0.074774246 Iter = 0.069199158 Bottom = 0.018945269 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3473321.253 MLMG: Initial residual (resid0) = 152.3725368 MLMG: Final Iter. 3 resid, resid/bnorm = 0.007682693037, 2.211915477e-09 MLMG: Timers: Solve = 0.034013699 Iter = 0.030231028 Bottom = 0.007924899 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.202681384e+10 MLMG: Initial residual (resid0) = 1.202681384e+10 MLMG: Final Iter. 9 resid, resid/bnorm = 0.1560506821, 1.297523052e-11 MLMG: Timers: Solve = 0.21638573 Iter = 0.212967526 Bottom = 0.023585718 Done calling nodal solver Timestep 0 ends with TIME = 0.0005809423507 DT = 0.0005809423507 Timing summary: Advection :0.404225351 seconds MAC Proj :0.13001371 seconds Nodal Proj :0.243873213 seconds Reactions :0.379017777 seconds Misc :0.091885637 seconds Base State :0.004468466 seconds Time to advance time step: 1.264282809 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.272094444 Beginning main evolution  Timestep 1 starts with TIME = 0 DT = 0.0005809423507 Cell Count: Level 0, 32768 cells Level 1, 24576 cells Level 2, 131072 cells inner sponge: r_sp , r_tp : 187875000, 223875000 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 807172.7037 MLMG: Initial residual (resid0) = 807172.7037 MLMG: Final Iter. 6 resid, resid/bnorm = 0.005743273185, 7.115296588e-09 MLMG: Timers: Solve = 0.063082991 Iter = 0.059383629 Bottom = 0.015847136 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 807172.7215 MLMG: Initial residual (resid0) = 0.8173196411 MLMG: Final Iter. 2 resid, resid/bnorm = 0.0002824640542, 3.499425175e-10 MLMG: Timers: Solve = 0.023883329 Iter = 0.020161257 Bottom = 0.004897004 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6986896.692 MLMG: Initial residual (resid0) = 6986896.692 MLMG: Final Iter. 9 resid, resid/bnorm = 9.066046914e-05, 1.297578498e-11 MLMG: Timers: Solve = 0.216593738 Iter = 0.213196986 Bottom = 0.023992998 Done calling nodal solver Timestep 1 ends with TIME = 0.0005809423507 DT = 0.0005809423507 Timing summary: Advection :0.370110633 seconds MAC Proj :0.106154646 seconds Nodal Proj :0.243332938 seconds Reactions :0.377898719 seconds Misc :0.077181734 seconds Base State :0.004455753 seconds Time to advance time step: 1.18902114 Call to estdt for level 0 gives dt_lev = 0.4121759496 Call to estdt for level 1 gives dt_lev = 0.2828508339 Call to estdt for level 2 gives dt_lev = 0.198551117 Minimum estdt over all levels = 0.198551117 Call to estdt at beginning of step 2 gives dt =0.198551117 dt_growth factor limits the new dt = 0.0006390365858  Timestep 2 starts with TIME = 0.0005809423507 DT = 0.0006390365858 Cell Count: Level 0, 32768 cells Level 1, 24576 cells Level 2, 131072 cells inner sponge: r_sp , r_tp : 187875000, 223875000 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 862408.7998 MLMG: Initial residual (resid0) = 862408.7998 MLMG: Final Iter. 6 resid, resid/bnorm = 0.005908789812, 6.851495269e-09 MLMG: Timers: Solve = 0.065035373 Iter = 0.061327103 Bottom = 0.018395823 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 862410.8019 MLMG: Initial residual (resid0) = 10430.26037 MLMG: Final Iter. 4 resid, resid/bnorm = 0.001076959023, 1.248777288e-09 MLMG: Timers: Solve = 0.042722201 Iter = 0.038931311 Bottom = 0.009724248 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 7717168.571 MLMG: Initial residual (resid0) = 7717168.571 MLMG: Final Iter. 9 resid, resid/bnorm = 9.889272042e-05, 1.281463784e-11 MLMG: Timers: Solve = 0.215642461 Iter = 0.212259713 Bottom = 0.022111622 Done calling nodal solver Timestep 2 ends with TIME = 0.001219978937 DT = 0.0006390365858 Timing summary: Advection :0.374488669 seconds MAC Proj :0.126865015 seconds Nodal Proj :0.242480288 seconds Reactions :0.379646758 seconds Misc :0.077902154 seconds Base State :0.004324628 seconds Time to advance time step: 1.20179894 Call to estdt for level 0 gives dt_lev = 0.412322209 Call to estdt for level 1 gives dt_lev = 0.2829378846 Call to estdt for level 2 gives dt_lev = 0.1986205604 Minimum estdt over all levels = 0.1986205604 Call to estdt at beginning of step 3 gives dt =0.1986205604 dt_growth factor limits the new dt = 0.0007029402444  Timestep 3 starts with TIME = 0.001219978937 DT = 0.0007029402444 Cell Count: Level 0, 32768 cells Level 1, 24576 cells Level 2, 131072 cells inner sponge: r_sp , r_tp : 187875000, 223875000 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 978885.4044 MLMG: Initial residual (resid0) = 978885.4044 MLMG: Final Iter. 6 resid, resid/bnorm = 0.006845083321, 6.992732029e-09 MLMG: Timers: Solve = 0.064455732 Iter = 0.060568436 Bottom = 0.016957027 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 978885.824 MLMG: Initial residual (resid0) = 1095.718141 MLMG: Final Iter. 4 resid, resid/bnorm = 0.001084102485, 1.107486142e-09 MLMG: Timers: Solve = 0.042924706 Iter = 0.03920489 Bottom = 0.009212406 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 8489041.657 MLMG: Initial residual (resid0) = 8489041.657 MLMG: Final Iter. 9 resid, resid/bnorm = 0.000106972293, 1.260122135e-11 MLMG: Timers: Solve = 0.216575687 Iter = 0.213075472 Bottom = 0.022378788 Done calling nodal solver Timestep 3 ends with TIME = 0.001922919181 DT = 0.0007029402444 Timing summary: Advection :0.377257966 seconds MAC Proj :0.12653223 seconds Nodal Proj :0.243321141 seconds Reactions :0.388952816 seconds Misc :0.078572493 seconds Base State :0.004483966 seconds Time to advance time step: 1.215042402 Writing plotfile 3 inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.28179462 Total Time: 7.938071328 Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d-amr_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] AMReX (24.10-11-g62c2a81eac78) finalized