Initializing AMReX (24.10-18-g92679babfc2c)... MPI initialized with 4 MPI processes MPI initialized with thread support level 0 AMReX (24.10-18-g92679babfc2c) initialized Calling Setup() Calling ReadParameters() reading extern runtime parameters ... Calling VariableSetup() Calling BCSetup() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) model file mapping, level: 1 dr of MAESTRO base state = 281250.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 729 radius at r_cutoff 205171875 Maximum HSE Error = 0.500936 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-2d-amr_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.103291928 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.005338991 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-2d-amr_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.061646137 Call to firstdt for level 0 gives dt_lev = 0.0004741795922 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795922 Call to firstdt for level 1 gives dt_lev = 0.0002743178815 Multiplying dt_lev by init_shrink; dt_lev = 0.0002743178815 Minimum firstdt over all levels = 0.0002743178815 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 9701.860972 MLMG: Initial residual (resid0) = 9701.860972 MLMG: Final Iter. 5 resid, resid/bnorm = 0.000323945667, 3.339005455e-08 MLMG: Timers: Solve = 0.123697589 Iter = 0.118382709 Bottom = 0.000250567 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1641628699 Call to estdt for level 1 gives dt_lev = 0.1158500464 Minimum estdt over all levels = 0.1158500464 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1158500464 Multiplying dt by init_shrink; dt = 0.1158500464 Ignoring this new dt since it's larger than the previous dt = 0.0002743178815 Writing plotfile reacting_bubble-2d-amr_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.240502659 Doing initial pressure iteration #1  Timestep 0 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1769558.576 MLMG: Initial residual (resid0) = 1769558.576 MLMG: Final Iter. 7 resid, resid/bnorm = 0.001462670577, 8.265736986e-10 MLMG: Timers: Solve = 0.069657365 Iter = 0.063163286 Bottom = 0.00026075 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1769557.1 MLMG: Initial residual (resid0) = 12562.98068 MLMG: Final Iter. 4 resid, resid/bnorm = 0.0003393813513, 1.917888669e-10 MLMG: Timers: Solve = 0.039087699 Iter = 0.036124812 Bottom = 0.000131665 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.293088754e+10 MLMG: Initial residual (resid0) = 1.293088754e+10 MLMG: Final Iter. 9 resid, resid/bnorm = 0.0536775589, 4.151111726e-12 MLMG: Timers: Solve = 0.21124273 Iter = 0.207081601 Bottom = 0.0004811 Done calling nodal solver Timestep 0 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.382883096 seconds MAC Proj :0.121252704 seconds Nodal Proj :0.262355248 seconds Reactions :1.692753527 seconds Misc :0.321609142 seconds Base State :0.00157792 seconds Time to advance time step: 2.797193542 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.359516053 Writing checkpoint 0 after all initialization Writing checkpoint reacting_bubble_2d_chk0000000 Beginning main evolution  Timestep 1 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 484084.2372 MLMG: Initial residual (resid0) = 484084.2372 MLMG: Final Iter. 7 resid, resid/bnorm = 3.840925974e-05, 7.934416531e-11 MLMG: Timers: Solve = 0.07099748 Iter = 0.066950437 Bottom = 0.000261272 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 484084.2266 MLMG: Initial residual (resid0) = 15.7407683 MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002654060098, 5.482641144e-10 MLMG: Timers: Solve = 0.036653895 Iter = 0.032155883 Bottom = 0.000119214 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3547174.998 MLMG: Initial residual (resid0) = 3547174.998 MLMG: Final Iter. 9 resid, resid/bnorm = 1.469277777e-05, 4.142106825e-12 MLMG: Timers: Solve = 0.2223982 Iter = 0.217956942 Bottom = 0.00061791 Done calling nodal solver Timestep 1 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.382099772 seconds MAC Proj :0.120414016 seconds Nodal Proj :0.27347098 seconds Reactions :1.710422558 seconds Misc :0.276550165 seconds Base State :0.001683971 seconds Time to advance time step: 2.7949088 Call to estdt for level 0 gives dt_lev = 0.2285161774 Call to estdt for level 1 gives dt_lev = 0.1613599181 Minimum estdt over all levels = 0.1613599181 Call to estdt at beginning of step 2 gives dt =0.1613599181 dt_growth factor limits the new dt = 0.0003017496696  Timestep 2 starts with TIME = 0.0002743178815 DT = 0.0003017496696 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 709087.2083 MLMG: Initial residual (resid0) = 709087.2083 MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005366312107, 7.567915545e-10 MLMG: Timers: Solve = 0.062954942 Iter = 0.058711038 Bottom = 0.000231041 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 709086.6226 MLMG: Initial residual (resid0) = 129230.7288 MLMG: Final Iter. 5 resid, resid/bnorm = 9.58553469e-05, 1.351814346e-10 MLMG: Timers: Solve = 0.051795937 Iter = 0.047714258 Bottom = 0.000169201 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3903892.245 MLMG: Initial residual (resid0) = 3903892.245 MLMG: Final Iter. 9 resid, resid/bnorm = 1.618126407e-05, 4.144905406e-12 MLMG: Timers: Solve = 0.228493273 Iter = 0.224099157 Bottom = 0.000615127 Done calling nodal solver Timestep 2 ends with TIME = 0.0005760675511 DT = 0.0003017496696 Timing summary: Advection :0.385836192 seconds MAC Proj :0.12729716 seconds Nodal Proj :0.285347091 seconds Reactions :1.728389754 seconds Misc :0.272965368 seconds Base State :0.001599194 seconds Time to advance time step: 2.800688828 Time to regrid: 0.129432887 Call to estdt for level 0 gives dt_lev = 0.2285277611 Call to estdt for level 1 gives dt_lev = 0.161379943 Minimum estdt over all levels = 0.161379943 Call to estdt at beginning of step 3 gives dt =0.161379943 dt_growth factor limits the new dt = 0.0003319246366  Timestep 3 starts with TIME = 0.0005760675511 DT = 0.0003319246366 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1070293.273 MLMG: Initial residual (resid0) = 1070293.273 MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005793986411, 5.413456815e-10 MLMG: Timers: Solve = 0.058179884 Iter = 0.05500766 Bottom = 0.000190481 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1070292.628 MLMG: Initial residual (resid0) = 47909.95923 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0001436925102, 1.342553489e-10 MLMG: Timers: Solve = 0.048857016 Iter = 0.045815134 Bottom = 0.000141512 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 4294280.633 MLMG: Initial residual (resid0) = 4294280.633 MLMG: Final Iter. 9 resid, resid/bnorm = 1.779058948e-05, 4.142856744e-12 MLMG: Timers: Solve = 0.209419258 Iter = 0.205676348 Bottom = 0.000513101 Done calling nodal solver Timestep 3 ends with TIME = 0.0009079921877 DT = 0.0003319246366 Timing summary: Advection :0.364952457 seconds MAC Proj :0.11824733 seconds Nodal Proj :0.25879628 seconds Reactions :1.665030292 seconds Misc :0.280588865 seconds Base State :0.001466642 seconds Time to advance time step: 2.688111913 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.11327862 Writing checkpoint 3 Writing checkpoint reacting_bubble_2d_chk0000003 Total Time: 19.45435186 Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d-amr_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] AMReX (24.10-18-g92679babfc2c) finalized