Initializing AMReX (24.12-7-g96db0a665ff1)... MPI initialized with 4 MPI processes MPI initialized with thread support level 0 AMReX (24.12-7-g96db0a665ff1) initialized Calling Setup() Calling ReadParameters() reading extern runtime parameters ... Calling VariableSetup() Calling BCSetup() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) model file mapping, level: 1 dr of MAESTRO base state = 281250.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 729 radius at r_cutoff 205171875 Maximum HSE Error = 0.500936 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-2d-amr_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.143036247 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.005587467 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-2d-amr_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.105289913 Call to firstdt for level 0 gives dt_lev = 0.0004741795922 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795922 Call to firstdt for level 1 gives dt_lev = 0.0002743178815 Multiplying dt_lev by init_shrink; dt_lev = 0.0002743178815 Minimum firstdt over all levels = 0.0002743178815 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 9701.860972 MLMG: Initial residual (resid0) = 9701.860972 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0003239457926, 3.339006748e-08 MLMG: Timers: Solve = 0.118279622 Iter = 0.112660812 Bottom = 0.000244312 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1641628699 Call to estdt for level 1 gives dt_lev = 0.1158500464 Minimum estdt over all levels = 0.1158500464 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1158500464 Multiplying dt by init_shrink; dt = 0.1158500464 Ignoring this new dt since it's larger than the previous dt = 0.0002743178815 Writing plotfile reacting_bubble-2d-amr_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.107351793 Doing initial pressure iteration #1  Timestep 0 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1769558.576 MLMG: Initial residual (resid0) = 1769558.576 MLMG: Final Iter. 7 resid, resid/bnorm = 0.001462616375, 8.265430683e-10 MLMG: Timers: Solve = 0.068055893 Iter = 0.062336309 Bottom = 0.00025049 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1769557.1 MLMG: Initial residual (resid0) = 12562.98068 MLMG: Final Iter. 4 resid, resid/bnorm = 0.0003393799789, 1.917880914e-10 MLMG: Timers: Solve = 0.039395695 Iter = 0.035882742 Bottom = 0.000133267 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.293088754e+10 MLMG: Initial residual (resid0) = 1.293088754e+10 MLMG: Final Iter. 9 resid, resid/bnorm = 0.0535402298, 4.140491488e-12 MLMG: Timers: Solve = 0.206307698 Iter = 0.202503626 Bottom = 0.000460352 Done calling nodal solver Timestep 0 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.379602762 seconds MAC Proj :0.119651896 seconds Nodal Proj :0.259566844 seconds Reactions :1.609500317 seconds Misc :0.296841199 seconds Base State :0.001436129 seconds Time to advance time step: 2.68277857 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.09282757 Writing checkpoint 0 after all initialization Writing checkpoint reacting_bubble_2d_chk0000000 Beginning main evolution  Timestep 1 starts with TIME = 0 DT = 0.0002743178815 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 484084.2372 MLMG: Initial residual (resid0) = 484084.2372 MLMG: Final Iter. 7 resid, resid/bnorm = 3.840941388e-05, 7.934448372e-11 MLMG: Timers: Solve = 0.066362843 Iter = 0.062862641 Bottom = 0.000249338 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 484084.2266 MLMG: Initial residual (resid0) = 15.74076829 MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002655861004, 5.486361376e-10 MLMG: Timers: Solve = 0.031402128 Iter = 0.027891976 Bottom = 0.000113056 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3547174.998 MLMG: Initial residual (resid0) = 3547174.998 MLMG: Final Iter. 9 resid, resid/bnorm = 1.46983657e-05, 4.143682145e-12 MLMG: Timers: Solve = 0.206301724 Iter = 0.202491593 Bottom = 0.000473765 Done calling nodal solver Timestep 1 ends with TIME = 0.0002743178815 DT = 0.0002743178815 Timing summary: Advection :0.35730208 seconds MAC Proj :0.108243321 seconds Nodal Proj :0.259644507 seconds Reactions :1.61202873 seconds Misc :0.27716302 seconds Base State :0.001436337001 seconds Time to advance time step: 2.638841978 Call to estdt for level 0 gives dt_lev = 0.2285161774 Call to estdt for level 1 gives dt_lev = 0.1613599181 Minimum estdt over all levels = 0.1613599181 Call to estdt at beginning of step 2 gives dt =0.1613599181 dt_growth factor limits the new dt = 0.0003017496696  Timestep 2 starts with TIME = 0.0002743178815 DT = 0.0003017496696 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 709087.2083 MLMG: Initial residual (resid0) = 709087.2083 MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005366309894, 7.567912425e-10 MLMG: Timers: Solve = 0.056866152 Iter = 0.053405515 Bottom = 0.000220595 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 709086.6226 MLMG: Initial residual (resid0) = 129230.7288 MLMG: Final Iter. 5 resid, resid/bnorm = 9.585471662e-05, 1.351805457e-10 MLMG: Timers: Solve = 0.048316576 Iter = 0.044728815 Bottom = 0.00017002 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 3903892.245 MLMG: Initial residual (resid0) = 3903892.245 MLMG: Final Iter. 9 resid, resid/bnorm = 1.617381349e-05, 4.142996906e-12 MLMG: Timers: Solve = 0.206603814 Iter = 0.202797855 Bottom = 0.000472476 Done calling nodal solver Timestep 2 ends with TIME = 0.0005760675511 DT = 0.0003017496696 Timing summary: Advection :0.383820202 seconds MAC Proj :0.115816208 seconds Nodal Proj :0.260290416 seconds Reactions :1.619473176 seconds Misc :0.278227759 seconds Base State :0.002098881999 seconds Time to advance time step: 2.658113233 Time to regrid: 0.131842751 Call to estdt for level 0 gives dt_lev = 0.2285277611 Call to estdt for level 1 gives dt_lev = 0.161379943 Minimum estdt over all levels = 0.161379943 Call to estdt at beginning of step 3 gives dt =0.161379943 dt_growth factor limits the new dt = 0.0003319246366  Timestep 3 starts with TIME = 0.0005760675511 DT = 0.0003319246366 Cell Count: Level 0, 245760 cells Level 1, 79872 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1070293.273 MLMG: Initial residual (resid0) = 1070293.273 MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005793985156, 5.413455643e-10 MLMG: Timers: Solve = 0.056858844 Iter = 0.053352762 Bottom = 0.000219596 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1070292.628 MLMG: Initial residual (resid0) = 47909.95923 MLMG: Final Iter. 5 resid, resid/bnorm = 0.0001436927208, 1.342555456e-10 MLMG: Timers: Solve = 0.048102248 Iter = 0.044647056 Bottom = 0.000164915 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 4294280.633 MLMG: Initial residual (resid0) = 4294280.633 MLMG: Final Iter. 9 resid, resid/bnorm = 1.778127626e-05, 4.140687993e-12 MLMG: Timers: Solve = 0.206283536 Iter = 0.202451086 Bottom = 0.000464079 Done calling nodal solver Timestep 3 ends with TIME = 0.0009079921877 DT = 0.0003319246366 Timing summary: Advection :0.363011337 seconds MAC Proj :0.115482169 seconds Nodal Proj :0.259408164 seconds Reactions :1.615692406 seconds Misc :0.284010058 seconds Base State :0.001395235999 seconds Time to advance time step: 2.638007371 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 1.103073362 Writing checkpoint 3 Writing checkpoint reacting_bubble_2d_chk0000003 Total Time: 18.61291558 Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d-amr_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] AMReX (24.12-7-g96db0a665ff1) finalized