Initializing AMReX (25.01-16-g92d35c2c8163)... MPI initialized with 4 MPI processes MPI initialized with thread support level 0 OMP initialized with 4 OMP threads AMReX (25.01-16-g92d35c2c8163) initialized Calling Setup() Calling ReadParameters() reading extern runtime parameters ... Calling VariableSetup() Calling BCSetup() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 2250000.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 91 radius at r_cutoff 205875000 Maximum HSE Error = 0.006358 (after putting initial model into base state arrays, and for density < base_cutoff_density) model file mapping, level: 1 dr of MAESTRO base state = 1125000.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 182 radius at r_cutoff 205312500 Maximum HSE Error = 0.001719 (after putting initial model into base state arrays, and for density < base_cutoff_density) model file mapping, level: 2 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-3d-amr_pltInitData after InitData inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.343527954 inner sponge: r_sp , r_tp : 187875000, 223875000 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.007710598 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-3d-amr_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.292197834 Call to firstdt for level 0 gives dt_lev = 0.001900185702 Multiplying dt_lev by init_shrink; dt_lev = 0.001900185702 Call to firstdt for level 1 gives dt_lev = 0.001145985589 Multiplying dt_lev by init_shrink; dt_lev = 0.001145985589 Call to firstdt for level 2 gives dt_lev = 0.0005809423507 Multiplying dt_lev by init_shrink; dt_lev = 0.0005809423507 Minimum firstdt over all levels = 0.0005809423507 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 3375.753789 MLMG: Initial residual (resid0) = 3375.753789 MLMG: Final Iter. 7 resid, resid/bnorm = 2.235684234e-07, 6.62277042e-11 MLMG: Timers: Solve = 0.169996951 Iter = 0.166347366 Bottom = 0.015189299 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.3446506058 Call to estdt for level 1 gives dt_lev = 0.2371958412 Call to estdt for level 2 gives dt_lev = 0.166684761 Minimum estdt over all levels = 0.166684761 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.166684761 Multiplying dt by init_shrink; dt = 0.166684761 Ignoring this new dt since it's larger than the previous dt = 0.0005809423507 Writing plotfile reacting_bubble-3d-amr_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.276501003 Doing initial pressure iteration #1  Timestep 0 starts with TIME = 0 DT = 0.0005809423507 Cell Count: Level 0, 32768 cells Level 1, 24576 cells Level 2, 131072 cells inner sponge: r_sp , r_tp : 187875000, 223875000 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3473324.294 MLMG: Initial residual (resid0) = 3473324.294 MLMG: Final Iter. 7 resid, resid/bnorm = 0.002037211321, 5.865306976e-10 MLMG: Timers: Solve = 0.073893361 Iter = 0.067923377 Bottom = 0.016131257 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3473321.253 MLMG: Initial residual (resid0) = 152.3725369 MLMG: Final Iter. 3 resid, resid/bnorm = 0.007682693352, 2.211915568e-09 MLMG: Timers: Solve = 0.034243289 Iter = 0.029795832 Bottom = 0.00677074 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.202681384e+10 MLMG: Initial residual (resid0) = 1.202681384e+10 MLMG: Final Iter. 9 resid, resid/bnorm = 0.1560537815, 1.297548823e-11 MLMG: Timers: Solve = 0.217780547 Iter = 0.214096509 Bottom = 0.020793894 Done calling nodal solver Timestep 0 ends with TIME = 0.0005809423507 DT = 0.0005809423507 Timing summary: Advection :0.48565458 seconds MAC Proj :0.132074141 seconds Nodal Proj :0.248641162 seconds Reactions :0.364635621 seconds Misc :0.101842685 seconds Base State :0.004737359 seconds Time to advance time step: 1.348670548 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.275706105 Beginning main evolution  Timestep 1 starts with TIME = 0 DT = 0.0005809423507 Cell Count: Level 0, 32768 cells Level 1, 24576 cells Level 2, 131072 cells inner sponge: r_sp , r_tp : 187875000, 223875000 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 807172.7037 MLMG: Initial residual (resid0) = 807172.7037 MLMG: Final Iter. 6 resid, resid/bnorm = 0.005743324291, 7.115359903e-09 MLMG: Timers: Solve = 0.062264099 Iter = 0.05744577 Bottom = 0.013204547 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 807172.7215 MLMG: Initial residual (resid0) = 0.8173203353 MLMG: Final Iter. 2 resid, resid/bnorm = 0.0002824680705, 3.499474932e-10 MLMG: Timers: Solve = 0.024517258 Iter = 0.019749918 Bottom = 0.003958691 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6986896.692 MLMG: Initial residual (resid0) = 6986896.692 MLMG: Final Iter. 9 resid, resid/bnorm = 9.066174971e-05, 1.297596826e-11 MLMG: Timers: Solve = 0.216867619 Iter = 0.212970795 Bottom = 0.020432561 Done calling nodal solver Timestep 1 ends with TIME = 0.0005809423507 DT = 0.0005809423507 Timing summary: Advection :0.45590573 seconds MAC Proj :0.107857684 seconds Nodal Proj :0.24703464 seconds Reactions :0.358046643 seconds Misc :0.09031959 seconds Base State :0.004874849 seconds Time to advance time step: 1.275411875 Call to estdt for level 0 gives dt_lev = 0.4121759496 Call to estdt for level 1 gives dt_lev = 0.2828508339 Call to estdt for level 2 gives dt_lev = 0.198551117 Minimum estdt over all levels = 0.198551117 Call to estdt at beginning of step 2 gives dt =0.198551117 dt_growth factor limits the new dt = 0.0006390365858  Timestep 2 starts with TIME = 0.0005809423507 DT = 0.0006390365858 Cell Count: Level 0, 32768 cells Level 1, 24576 cells Level 2, 131072 cells inner sponge: r_sp , r_tp : 187875000, 223875000 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 862408.7998 MLMG: Initial residual (resid0) = 862408.7998 MLMG: Final Iter. 6 resid, resid/bnorm = 0.005907685729, 6.850215037e-09 MLMG: Timers: Solve = 0.063547362 Iter = 0.058788121 Bottom = 0.014239233 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 862410.8019 MLMG: Initial residual (resid0) = 10430.26042 MLMG: Final Iter. 4 resid, resid/bnorm = 0.001076968352, 1.248788106e-09 MLMG: Timers: Solve = 0.0427402 Iter = 0.037950354 Bottom = 0.007833303 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 7717168.571 MLMG: Initial residual (resid0) = 7717168.571 MLMG: Final Iter. 9 resid, resid/bnorm = 9.889726061e-05, 1.281522617e-11 MLMG: Timers: Solve = 0.216705097 Iter = 0.212787001 Bottom = 0.019154694 Done calling nodal solver Timestep 2 ends with TIME = 0.001219978937 DT = 0.0006390365858 Timing summary: Advection :0.465863934 seconds MAC Proj :0.127386806 seconds Nodal Proj :0.247925721 seconds Reactions :0.360881688 seconds Misc :0.091498137 seconds Base State :0.004910065 seconds Time to advance time step: 1.294119517 Call to estdt for level 0 gives dt_lev = 0.412322209 Call to estdt for level 1 gives dt_lev = 0.2829378846 Call to estdt for level 2 gives dt_lev = 0.1986205604 Minimum estdt over all levels = 0.1986205604 Call to estdt at beginning of step 3 gives dt =0.1986205604 dt_growth factor limits the new dt = 0.0007029402444  Timestep 3 starts with TIME = 0.001219978937 DT = 0.0007029402444 Cell Count: Level 0, 32768 cells Level 1, 24576 cells Level 2, 131072 cells inner sponge: r_sp , r_tp : 187875000, 223875000 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 978885.4037 MLMG: Initial residual (resid0) = 978885.4037 MLMG: Final Iter. 6 resid, resid/bnorm = 0.006846081349, 6.993751591e-09 MLMG: Timers: Solve = 0.063292815 Iter = 0.058567468 Bottom = 0.014213328 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 978885.8232 MLMG: Initial residual (resid0) = 1095.71815 MLMG: Final Iter. 4 resid, resid/bnorm = 0.001084094298, 1.107477779e-09 MLMG: Timers: Solve = 0.042749182 Iter = 0.038125531 Bottom = 0.007492782 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 8489041.657 MLMG: Initial residual (resid0) = 8489041.657 MLMG: Final Iter. 9 resid, resid/bnorm = 0.0001069692662, 1.26008648e-11 MLMG: Timers: Solve = 0.214831216 Iter = 0.211034014 Bottom = 0.01815271 Done calling nodal solver Timestep 3 ends with TIME = 0.001922919181 DT = 0.0007029402444 Timing summary: Advection :0.466964254 seconds MAC Proj :0.126633135 seconds Nodal Proj :0.248658761 seconds Reactions :0.360596646 seconds Misc :0.098496535 seconds Base State :0.005210477 seconds Time to advance time step: 1.302491892 Writing plotfile 3 inner sponge: r_sp , r_tp : 187875000, 223875000 Time to write plotfile: 0.319224325 Total Time: 8.428427217 Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d-amr_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] AMReX (25.01-16-g92d35c2c8163) finalized