Initializing AMReX (25.03-6-g5da47374715c)...
MPI initialized with 4 MPI processes
MPI initialized with thread support level 0
OMP initialized with 4 OMP threads
AMReX (25.03-6-g5da47374715c) initialized
Calling Setup()
Calling ReadParameters()
reading extern runtime parameters ...
Calling VariableSetup()
Calling BCSetup()
Calling BaseStateGeometry::Init()
Calling Init()
Calling InitData()
initdata model_File = model.hse.cool.coulomb
model file = model.hse.cool.coulomb
reading initial model
640 points found in the initial model
6 variables found in the initial model
model file mapping, level: 0
dr of MAESTRO base state = 562500.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 365
radius at r_cutoff 205593750
Maximum HSE Error = 0.000061
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
Writing plotfile reacting_bubble-3d_pltInitData after InitData
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.4632636
inner sponge: r_sp , r_tp : 186468750, 224718750
[1m[32mDoing initial projection[0m
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.019403404 Iter = 0 Bottom = 0
Done calling nodal solver
Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.367195854
Call to firstdt for level 0 gives dt_lev = 0.0004741795139
Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139
Minimum firstdt over all levels = 0.0004741795139
[1m[32mDoing initial divu iteration #1[0m
Calling nodal solver
MLMG: Initial rhs = 2054.815795
MLMG: Initial residual (resid0) = 2054.815795
MLMG: Final Iter. 7 resid, resid/bnorm = 5.583462581e-10, 2.717256989e-13
MLMG: Timers: Solve = 0.797134408 Iter = 0.760543202 Bottom = 0.026772783
Done calling nodal solver
Call to estdt for level 0 gives dt_lev = 0.1719927642
Minimum estdt over all levels = 0.1719927642
Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642
Multiplying dt by init_shrink; dt = 0.1719927642
Ignoring this new dt since it's larger than the previous dt = 0.0004741795139
Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.393335879
[1m[32mDoing initial pressure iteration #1[0m
[1m[32m
Timestep 0 starts with TIME = 0 DT = 0.0004741795139[0m
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 2728631.973
MLMG: Initial residual (resid0) = 2728631.973
MLMG: Final Iter. 9 resid, resid/bnorm = 1.565250568e-05, 5.736393121e-12
MLMG: Timers: Solve = 0.2455597 Iter = 0.229301042 Bottom = 0.051364463
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 2728627.792
MLMG: Initial residual (resid0) = 8729.745164
MLMG: Final Iter. 5 resid, resid/bnorm = 0.0002251335536, 8.2507975e-11
MLMG: Timers: Solve = 0.139976872 Iter = 0.12400931 Bottom = 0.02747764
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 1.157552615e+10
MLMG: Initial residual (resid0) = 1.157552615e+10
MLMG: Final Iter. 7 resid, resid/bnorm = 0.002669021285, 2.305745112e-13
MLMG: Timers: Solve = 0.800402277 Iter = 0.784187258 Bottom = 0.024983387
Done calling nodal solver
Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139
Timing summary:
Advection :1.671181219 seconds
MAC Proj :0.447427802 seconds
Nodal Proj :0.909211757 seconds
Reactions :2.003254945 seconds
Misc :0.433270197 seconds
Base State :0.009398231001 seconds
Time to advance time step: 5.493791402
Writing plotfile 0 after all initialization
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.384440278
[1m[32mBeginning main evolution[0m
[1m[32m
Timestep 1 starts with TIME = 0 DT = 0.0004741795139[0m
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1308380.202
MLMG: Initial residual (resid0) = 1308380.202
MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001226427703, 9.37363391e-11
MLMG: Timers: Solve = 0.172639586 Iter = 0.160170286 Bottom = 0.032820055
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1308380.236
MLMG: Initial residual (resid0) = 0.982250484
MLMG: Final Iter. 4 resid, resid/bnorm = 3.543014827e-05, 2.707939733e-11
MLMG: Timers: Solve = 0.092854871 Iter = 0.080229439 Bottom = 0.016430527
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 5488883.985
MLMG: Initial residual (resid0) = 5488883.985
MLMG: Final Iter. 7 resid, resid/bnorm = 1.276901457e-06, 2.326340766e-13
MLMG: Timers: Solve = 0.76084062 Iter = 0.74533128 Bottom = 0.020438836
Done calling nodal solver
Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139
Timing summary:
Advection :1.487656841 seconds
MAC Proj :0.318592872 seconds
Nodal Proj :0.855002351 seconds
Reactions :1.873058555 seconds
Misc :0.43304904 seconds
Base State :0.003148648 seconds
Time to advance time step: 5.002096932
Call to estdt for level 0 gives dt_lev = 0.2012294718
Minimum estdt over all levels = 0.2012294718
Call to estdt at beginning of step 2 gives dt =0.2012294718
dt_growth factor limits the new dt = 0.0005215974653
[1m[32m
Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653[0m
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1426181.405
MLMG: Initial residual (resid0) = 1426181.405
MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001355668355, 9.505581478e-11
MLMG: Timers: Solve = 0.17361035 Iter = 0.161092287 Bottom = 0.032520487
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1426184.06
MLMG: Initial residual (resid0) = 5132.459653
MLMG: Final Iter. 6 resid, resid/bnorm = 3.069994636e-05, 2.152593569e-11
MLMG: Timers: Solve = 0.13382842 Iter = 0.121393352 Bottom = 0.025643997
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 6063789.798
MLMG: Initial residual (resid0) = 6063789.798
MLMG: Final Iter. 7 resid, resid/bnorm = 1.456762325e-06, 2.402395817e-13
MLMG: Timers: Solve = 0.751059656 Iter = 0.735959069 Bottom = 0.018151776
Done calling nodal solver
Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653
Timing summary:
Advection :1.499025248 seconds
MAC Proj :0.360699262 seconds
Nodal Proj :0.844533712 seconds
Reactions :1.890167414 seconds
Misc :0.43939671 seconds
Base State :0.005955928 seconds
Time to advance time step: 5.056124969
Call to estdt for level 0 gives dt_lev = 0.20128497
Minimum estdt over all levels = 0.20128497
Call to estdt at beginning of step 3 gives dt =0.20128497
dt_growth factor limits the new dt = 0.0005737572118
[1m[32m
Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118[0m
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1597942.993
MLMG: Initial residual (resid0) = 1597942.993
MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001512539166, 9.465538957e-11
MLMG: Timers: Solve = 0.172054863 Iter = 0.159603608 Bottom = 0.031760215
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1597945.914
MLMG: Initial residual (resid0) = 5863.170847
MLMG: Final Iter. 6 resid, resid/bnorm = 3.355396075e-05, 2.099818302e-11
MLMG: Timers: Solve = 0.135032315 Iter = 0.122347067 Bottom = 0.025518126
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 6670310.291
MLMG: Initial residual (resid0) = 6670310.291
MLMG: Final Iter. 7 resid, resid/bnorm = 4.166027845e-06, 6.245628259e-13
MLMG: Timers: Solve = 0.80277555 Iter = 0.787247369 Bottom = 0.021112691
Done calling nodal solver
Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118
Timing summary:
Advection :1.558589212 seconds
MAC Proj :0.360454353 seconds
Nodal Proj :0.899702033 seconds
Reactions :1.968416337 seconds
Misc :0.465928038 seconds
Base State :0.004049367 seconds
Time to advance time step: 5.276258107
Writing plotfile 3
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.419287516
Total Time: 31.42156962
Unused ParmParse Variables:
[TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk]
[TOP]::amr.checkpoint_files_output(nvals = 1) :: [0]
[TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2]
AMReX (25.03-6-g5da47374715c) finalized