Initializing AMReX (25.03-12-g081b96006bd6)...
MPI initialized with 4 MPI processes
MPI initialized with thread support level 0
AMReX (25.03-12-g081b96006bd6) initialized
Calling Setup()
Calling ReadParameters()
reading extern runtime parameters ...
Calling VariableSetup()
Calling BCSetup()
Calling BaseStateGeometry::Init()
Calling Init()
Calling InitData()
initdata model_File = model.hse.cool.coulomb
model file = model.hse.cool.coulomb
reading initial model
640 points found in the initial model
6 variables found in the initial model
model file mapping, level: 0
dr of MAESTRO base state = 562500.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 365
radius at r_cutoff 205593750
Maximum HSE Error = 0.000061
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
model file mapping, level: 1
dr of MAESTRO base state = 281250.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 729
radius at r_cutoff 205171875
Maximum HSE Error = 0.500936
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
Writing plotfile reacting_bubble-2d-amr_pltInitData after InitData
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.09963965
inner sponge: r_sp , r_tp : 186468750, 224718750
[1m[32mDoing initial projection[0m
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.005377128 Iter = 0 Bottom = 0
Done calling nodal solver
Writing plotfile reacting_bubble-2d-amr_pltafter_InitProj after InitProj
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.058758382
Call to firstdt for level 0 gives dt_lev = 0.0004741795922
Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795922
Call to firstdt for level 1 gives dt_lev = 0.0002743178815
Multiplying dt_lev by init_shrink; dt_lev = 0.0002743178815
Minimum firstdt over all levels = 0.0002743178815
[1m[32mDoing initial divu iteration #1[0m
Calling nodal solver
MLMG: Initial rhs = 9701.860973
MLMG: Initial residual (resid0) = 9701.860973
MLMG: Final Iter. 5 resid, resid/bnorm = 0.0003239456123, 3.33900489e-08
MLMG: Timers: Solve = 0.113789939 Iter = 0.108355283 Bottom = 0.000142025
Done calling nodal solver
Call to estdt for level 0 gives dt_lev = 0.1641628699
Call to estdt for level 1 gives dt_lev = 0.1158500463
Minimum estdt over all levels = 0.1158500463
Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1158500463
Multiplying dt by init_shrink; dt = 0.1158500463
Ignoring this new dt since it's larger than the previous dt = 0.0002743178815
Writing plotfile reacting_bubble-2d-amr_pltafter_DivuIter after final DivuIter
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.053937704
[1m[32mDoing initial pressure iteration #1[0m
[1m[32m
Timestep 0 starts with TIME = 0 DT = 0.0002743178815[0m
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1769558.576
MLMG: Initial residual (resid0) = 1769558.576
MLMG: Final Iter. 7 resid, resid/bnorm = 0.001462788824, 8.266405216e-10
MLMG: Timers: Solve = 0.066054274 Iter = 0.059859284 Bottom = 0.000213482
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1769557.101
MLMG: Initial residual (resid0) = 12562.98069
MLMG: Final Iter. 4 resid, resid/bnorm = 0.0003393793395, 1.9178773e-10
MLMG: Timers: Solve = 0.037786896 Iter = 0.034997227 Bottom = 0.00011566
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 1.293088754e+10
MLMG: Initial residual (resid0) = 1.293088754e+10
MLMG: Final Iter. 9 resid, resid/bnorm = 0.0536775589, 4.151111726e-12
MLMG: Timers: Solve = 0.211222651 Iter = 0.207313898 Bottom = 0.000251253
Done calling nodal solver
Timestep 0 ends with TIME = 0.0002743178815 DT = 0.0002743178815
Timing summary:
Advection :0.369202492 seconds
MAC Proj :0.115576446 seconds
Nodal Proj :0.263599032 seconds
Reactions :1.564375848 seconds
Misc :0.28651033 seconds
Base State :0.001618635 seconds
Time to advance time step: 2.617853613
Writing plotfile 0 after all initialization
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.057717522
Writing checkpoint 0 after all initialization
Writing checkpoint reacting_bubble_2d_chk0000000
[1m[32mBeginning main evolution[0m
[1m[32m
Timestep 1 starts with TIME = 0 DT = 0.0002743178815[0m
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 484084.2371
MLMG: Initial residual (resid0) = 484084.2371
MLMG: Final Iter. 7 resid, resid/bnorm = 3.840929897e-05, 7.934424635e-11
MLMG: Timers: Solve = 0.068239214 Iter = 0.065056413 Bottom = 0.000193089
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 484084.2265
MLMG: Initial residual (resid0) = 15.74076829
MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002655449432, 5.485511169e-10
MLMG: Timers: Solve = 0.031785778 Iter = 0.028757937 Bottom = 8.5885e-05
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 3547174.998
MLMG: Initial residual (resid0) = 3547174.998
MLMG: Final Iter. 9 resid, resid/bnorm = 1.467764378e-05, 4.137840334e-12
MLMG: Timers: Solve = 0.20390283 Iter = 0.1999471 Bottom = 0.000230293
Done calling nodal solver
Timestep 1 ends with TIME = 0.0002743178815 DT = 0.0002743178815
Timing summary:
Advection :0.342325641 seconds
MAC Proj :0.110900268 seconds
Nodal Proj :0.25462789 seconds
Reactions :1.577231025 seconds
Misc :0.25823736 seconds
Base State :0.001481985001 seconds
Time to advance time step: 2.5652651
Call to estdt for level 0 gives dt_lev = 0.2285161774
Call to estdt for level 1 gives dt_lev = 0.1613599181
Minimum estdt over all levels = 0.1613599181
Call to estdt at beginning of step 2 gives dt =0.1613599181
dt_growth factor limits the new dt = 0.0003017496696
[1m[32m
Timestep 2 starts with TIME = 0.0002743178815 DT = 0.0003017496696[0m
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 709087.2083
MLMG: Initial residual (resid0) = 709087.2083
MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005366311702, 7.567914974e-10
MLMG: Timers: Solve = 0.058366048 Iter = 0.055243562 Bottom = 0.000173726
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 709086.6226
MLMG: Initial residual (resid0) = 129230.7288
MLMG: Final Iter. 5 resid, resid/bnorm = 9.585541477e-05, 1.351815303e-10
MLMG: Timers: Solve = 0.049054613 Iter = 0.046012253 Bottom = 0.00013112
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 3903892.245
MLMG: Initial residual (resid0) = 3903892.245
MLMG: Final Iter. 9 resid, resid/bnorm = 1.619942486e-05, 4.149557377e-12
MLMG: Timers: Solve = 0.204739957 Iter = 0.20123453 Bottom = 0.000232069
Done calling nodal solver
Timestep 2 ends with TIME = 0.0005760675511 DT = 0.0003017496696
Timing summary:
Advection :0.346864059 seconds
MAC Proj :0.11814518 seconds
Nodal Proj :0.254167843 seconds
Reactions :1.576750519 seconds
Misc :0.259730105 seconds
Base State :0.001552597 seconds
Time to advance time step: 2.556087297
Time to regrid: 0.124236441
Call to estdt for level 0 gives dt_lev = 0.2285277611
Call to estdt for level 1 gives dt_lev = 0.161379943
Minimum estdt over all levels = 0.161379943
Call to estdt at beginning of step 3 gives dt =0.161379943
dt_growth factor limits the new dt = 0.0003319246366
[1m[32m
Timestep 3 starts with TIME = 0.0005760675511 DT = 0.0003319246366[0m
Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1070293.273
MLMG: Initial residual (resid0) = 1070293.273
MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005793995088, 5.413464922e-10
MLMG: Timers: Solve = 0.056682764 Iter = 0.0537173 Bottom = 0.000167766
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1070292.628
MLMG: Initial residual (resid0) = 47909.95947
MLMG: Final Iter. 5 resid, resid/bnorm = 0.0001436926852, 1.342555124e-10
MLMG: Timers: Solve = 0.048385182 Iter = 0.045305656 Bottom = 0.000125726
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 4294280.633
MLMG: Initial residual (resid0) = 4294280.633
MLMG: Final Iter. 9 resid, resid/bnorm = 1.781014726e-05, 4.147411121e-12
MLMG: Timers: Solve = 0.20555969 Iter = 0.201820619 Bottom = 0.000224998
Done calling nodal solver
Timestep 3 ends with TIME = 0.0009079921877 DT = 0.0003319246366
Timing summary:
Advection :0.349486207 seconds
MAC Proj :0.115795507 seconds
Nodal Proj :0.255316996 seconds
Reactions :1.576162896 seconds
Misc :0.260893348 seconds
Base State :0.001529103 seconds
Time to advance time step: 2.558077723
Writing plotfile 3
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.046440948
Writing checkpoint 3
Writing checkpoint reacting_bubble_2d_chk0000003
Total Time: 18.04418935
Unused ParmParse Variables:
[TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d-amr_chk]
[TOP]::amr.checkpoint_files_output(nvals = 1) :: [0]
AMReX (25.03-12-g081b96006bd6) finalized