Initializing AMReX (25.03-14-geae3e36137ad)...
MPI initialized with 2 MPI processes
MPI initialized with thread support level 0
OMP initialized with 4 OMP threads
AMReX (25.03-14-geae3e36137ad) initialized
Calling Setup()
Calling ReadParameters()
reading extern runtime parameters ...
Calling VariableSetup()
Calling BCSetup()
Calling BaseStateGeometry::Init()
Calling Init()
Calling InitData()
initdata model_File =
cutoff densities:
low density cutoff (for mapping the model) = 1e-10
buoyancy cutoff density
(for zeroing rho - rho_0, centrifugal term) = 5e-10
anelastic cutoff = 1e-10
Maximum HSE Error = 2.273736754e-13
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
Writing plotfile RT_pltInitData after InitData
Time to write plotfile: 0.066722734
[1m[32mDoing initial projection[0m
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.003282008 Iter = 0 Bottom = 0
Done calling nodal solver
Writing plotfile RT_pltafter_InitProj after InitProj
Time to write plotfile: 0.051513106
Call to firstdt for level 0 gives dt_lev = 0.0006089835859
Multiplying dt_lev by init_shrink; dt_lev = 6.089835859e-05
Minimum firstdt over all levels = 6.089835859e-05
[1m[32mDoing initial divu iteration #1[0m
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.003163801 Iter = 0 Bottom = 0
Done calling nodal solver
Call to estdt for level 0 gives dt_lev = 0.08660444773
Minimum estdt over all levels = 0.08660444773
Call to estdt at end of istep_divu_iter = 1 gives dt = 0.08660444773
Multiplying dt by init_shrink; dt = 0.008660444773
Ignoring this new dt since it's larger than the previous dt = 6.089835859e-05
Writing plotfile RT_pltafter_DivuIter after final DivuIter
Time to write plotfile: 0.049789683
[1m[32mDoing initial pressure iteration #1[0m
[1m[32m
Timestep 0 starts with TIME = 0 DT = 6.089835859e-05[0m
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 0.002421164472
MLMG: Initial residual (resid0) = 0.002421164472
MLMG: Final Iter. 9 resid, resid/bnorm = 1.751907767e-13, 7.235806522e-11
MLMG: Timers: Solve = 0.036976257 Iter = 0.035400673 Bottom = 0.004302233
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 0.002421205691
MLMG: Initial residual (resid0) = 2.151449931e-06
MLMG: Final Iter. 7 resid, resid/bnorm = 9.927909435e-14, 4.100399017e-11
MLMG: Timers: Solve = 0.029004203 Iter = 0.027297834 Bottom = 0.003107664
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 58.12657035
MLMG: Initial residual (resid0) = 58.12657035
MLMG: Final Iter. 8 resid, resid/bnorm = 2.15578666e-11, 3.708780077e-13
MLMG: Timers: Solve = 0.056851706 Iter = 0.055284527 Bottom = 0.002901722
Done calling nodal solver
Timestep 0 ends with TIME = 6.089835859e-05 DT = 6.089835859e-05
Timing summary:
Advection :0.088107777 seconds
MAC Proj :0.073368315 seconds
Nodal Proj :0.063504522 seconds
Reactions :0.004757673 seconds
Misc :0.026463822 seconds
Base State :0.0004262079997 seconds
Time to advance time step: 0.259738736
Writing plotfile 0 after all initialization
Time to write plotfile: 0.040212153
[1m[32mBeginning main evolution[0m
[1m[32m
Timestep 1 starts with TIME = 0 DT = 6.089835859e-05[0m
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 2.394238647e-05
MLMG: Initial residual (resid0) = 2.394238647e-05
MLMG: Final Iter. 9 resid, resid/bnorm = 3.181792236e-16, 1.328936963e-11
MLMG: Timers: Solve = 0.036808171 Iter = 0.035100685 Bottom = 0.004317302
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 2.394218844e-05
MLMG: Initial residual (resid0) = 1.928423574e-06
MLMG: Final Iter. 9 resid, resid/bnorm = 6.036511589e-16, 2.521286475e-11
MLMG: Timers: Solve = 0.036703629 Iter = 0.035202384 Bottom = 0.003783508
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 0.003539812449
MLMG: Initial residual (resid0) = 0.003539812449
MLMG: Final Iter. 8 resid, resid/bnorm = 1.329231863e-15, 3.755091216e-13
MLMG: Timers: Solve = 0.054506901 Iter = 0.052826333 Bottom = 0.002887362
Done calling nodal solver
Timestep 1 ends with TIME = 6.089835859e-05 DT = 6.089835859e-05
Timing summary:
Advection :0.080931035 seconds
MAC Proj :0.080276987 seconds
Nodal Proj :0.062107079 seconds
Reactions :0.004349029 seconds
Misc :0.013580237 seconds
Base State :0.0003955150005 seconds
Time to advance time step: 0.24463731
Call to estdt for level 0 gives dt_lev = 0.3128878797
Minimum estdt over all levels = 0.3128878797
Call to estdt at beginning of step 2 gives dt =0.3128878797
dt_growth factor limits the new dt = 6.698819445e-05
[1m[32m
Timestep 2 starts with TIME = 6.089835859e-05 DT = 6.698819445e-05[0m
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 3.050043585e-05
MLMG: Initial residual (resid0) = 3.050043585e-05
MLMG: Final Iter. 9 resid, resid/bnorm = 2.284814624e-15, 7.491088439e-11
MLMG: Timers: Solve = 0.037445292 Iter = 0.035859615 Bottom = 0.004212168
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 3.059063412e-05
MLMG: Initial residual (resid0) = 5.66083759e-06
MLMG: Final Iter. 10 resid, resid/bnorm = 4.892627475e-16, 1.599387399e-11
MLMG: Timers: Solve = 0.0410981 Iter = 0.039456171 Bottom = 0.004294216
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 0.003894013591
MLMG: Initial residual (resid0) = 0.003894013591
MLMG: Final Iter. 8 resid, resid/bnorm = 1.490994828e-15, 3.828940996e-13
MLMG: Timers: Solve = 0.052575834 Iter = 0.050953424 Bottom = 0.00292665
Done calling nodal solver
Timestep 2 ends with TIME = 0.000127886553 DT = 6.698819445e-05
Timing summary:
Advection :0.082896421 seconds
MAC Proj :0.085973008 seconds
Nodal Proj :0.059395498 seconds
Reactions :0.00418944 seconds
Misc :0.013361639 seconds
Base State :0.0004013479993 seconds
Time to advance time step: 0.246148233
Call to estdt for level 0 gives dt_lev = 0.3130286362
Minimum estdt over all levels = 0.3130286362
Call to estdt at beginning of step 3 gives dt =0.3130286362
dt_growth factor limits the new dt = 7.36870139e-05
[1m[32m
Timestep 3 starts with TIME = 0.000127886553 DT = 7.36870139e-05[0m
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 3.168800511e-05
MLMG: Initial residual (resid0) = 3.168800511e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 5.650700787e-16, 1.783230205e-11
MLMG: Timers: Solve = 0.042427911 Iter = 0.040438633 Bottom = 0.004999611
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 3.178722337e-05
MLMG: Initial residual (resid0) = 1.012935749e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 6.833616179e-16, 2.149799653e-11
MLMG: Timers: Solve = 0.042394397 Iter = 0.040756112 Bottom = 0.004823273
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 0.004283414244
MLMG: Initial residual (resid0) = 0.004283414244
MLMG: Final Iter. 8 resid, resid/bnorm = 1.614810716e-15, 3.769914894e-13
MLMG: Timers: Solve = 0.05406838 Iter = 0.052344598 Bottom = 0.003265979
Done calling nodal solver
Timestep 3 ends with TIME = 0.0002015735669 DT = 7.36870139e-05
Timing summary:
Advection :0.104978873 seconds
MAC Proj :0.092235822 seconds
Nodal Proj :0.061327696 seconds
Reactions :0.005820064 seconds
Misc :0.013152208 seconds
Base State :0.0007877929997 seconds
Time to advance time step: 0.277945032
Call to estdt for level 0 gives dt_lev = 0.3130285358
Minimum estdt over all levels = 0.3130285358
Call to estdt at beginning of step 4 gives dt =0.3130285358
dt_growth factor limits the new dt = 8.105571529e-05
[1m[32m
Timestep 4 starts with TIME = 0.0002015735669 DT = 8.105571529e-05[0m
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 3.570538736e-05
MLMG: Initial residual (resid0) = 3.570538736e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 7.571110825e-16, 2.120439347e-11
MLMG: Timers: Solve = 0.041571369 Iter = 0.03998424 Bottom = 0.004953095
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 3.581452755e-05
MLMG: Initial residual (resid0) = 1.504387741e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 8.870129024e-16, 2.476684639e-11
MLMG: Timers: Solve = 0.042149738 Iter = 0.040386984 Bottom = 0.004701212
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 0.004711755906
MLMG: Initial residual (resid0) = 0.004711755906
MLMG: Final Iter. 8 resid, resid/bnorm = 1.768550584e-15, 3.753485153e-13
MLMG: Timers: Solve = 0.054002586 Iter = 0.052324223 Bottom = 0.003197595
Done calling nodal solver
Timestep 4 ends with TIME = 0.0002826292822 DT = 8.105571529e-05
Timing summary:
Advection :0.077700111 seconds
MAC Proj :0.09072523 seconds
Nodal Proj :0.060276805 seconds
Reactions :0.004347546 seconds
Misc :0.016621729 seconds
Base State :0.0003911250001 seconds
Time to advance time step: 0.249996865
Call to estdt for level 0 gives dt_lev = 0.313028505
Minimum estdt over all levels = 0.313028505
Call to estdt at beginning of step 5 gives dt =0.313028505
dt_growth factor limits the new dt = 8.916128682e-05
[1m[32m
Timestep 5 starts with TIME = 0.0002826292822 DT = 8.916128682e-05[0m
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 4.013180326e-05
MLMG: Initial residual (resid0) = 4.013180326e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 9.681425651e-16, 2.412407334e-11
MLMG: Timers: Solve = 0.042237348 Iter = 0.040640263 Bottom = 0.004962013
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 4.025185748e-05
MLMG: Initial residual (resid0) = 2.044985444e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 1.111036176e-15, 2.760210946e-11
MLMG: Timers: Solve = 0.041874932 Iter = 0.040334821 Bottom = 0.004696734
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 0.005182931901
MLMG: Initial residual (resid0) = 0.005182931901
MLMG: Final Iter. 8 resid, resid/bnorm = 1.942022931e-15, 3.746958224e-13
MLMG: Timers: Solve = 0.05390289 Iter = 0.052290433 Bottom = 0.003251332
Done calling nodal solver
Timestep 5 ends with TIME = 0.000371790569 DT = 8.916128682e-05
Timing summary:
Advection :0.078268066 seconds
MAC Proj :0.091190812 seconds
Nodal Proj :0.060411908 seconds
Reactions :0.0030262 seconds
Misc :0.011735744 seconds
Base State :0.0003790989999 seconds
Time to advance time step: 0.244975481
Writing plotfile 5
Time to write plotfile: 0.040197038
Total Time: 1.840461548
Unused ParmParse Variables:
[TOP]::amr.check_file(nvals = 1) :: [RT_chk]
[TOP]::amr.checkpoint_files_output(nvals = 1) :: [0]
[TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2]
AMReX (25.03-14-geae3e36137ad) finalized