Initializing AMReX (25.03-16-g7626a3f0d46d)...
MPI initialized with 4 MPI processes
MPI initialized with thread support level 0
AMReX (25.03-16-g7626a3f0d46d) initialized
Calling Setup()
Calling ReadParameters()
reading extern runtime parameters ...
Calling VariableSetup()
Calling BCSetup()
Calling BaseStateGeometry::Init()
Calling Init()
Calling InitData()
initdata model_File = model.hse.cool.coulomb
model file = model.hse.cool.coulomb


reading initial model
640 points found in the initial model
6 variables found in the initial model
model file mapping, level: 0
dr of MAESTRO base state =                            562500.000000
dr of input file data =                               562500.000000

maximum radius (cell-centered) of input model =       359718750.000000
 
setting r_cutoff to 365
radius at r_cutoff 205593750

Maximum HSE Error = 0.000061
(after putting initial model into base state arrays, and
for density < base_cutoff_density)

model file mapping, level: 1
dr of MAESTRO base state =                            281250.000000
dr of input file data =                               562500.000000

maximum radius (cell-centered) of input model =       359718750.000000
 
setting r_cutoff to 729
radius at r_cutoff 205171875

Maximum HSE Error = 0.500936
(after putting initial model into base state arrays, and
for density < base_cutoff_density)


Writing plotfile reacting_bubble-2d-amr_pltInitData after InitData
inner sponge: r_sp      , r_tp      : 186468750, 224718750
Time to write plotfile: 1.158690596
inner sponge: r_sp      , r_tp      : 186468750, 224718750

Doing initial projection
Calling nodal solver
MLMG: Initial rhs               = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.005648671 Iter = 0 Bottom = 0
Done calling nodal solver

Writing plotfile reacting_bubble-2d-amr_pltafter_InitProj after InitProj
inner sponge: r_sp      , r_tp      : 186468750, 224718750
Time to write plotfile: 1.113477921
Call to firstdt for level 0 gives dt_lev = 0.0004741795922
Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795922
Call to firstdt for level 1 gives dt_lev = 0.0002743178815
Multiplying dt_lev by init_shrink; dt_lev = 0.0002743178815
Minimum firstdt over all levels = 0.0002743178815

Doing initial divu iteration #1
Calling nodal solver
MLMG: Initial rhs               = 9701.860973
MLMG: Initial residual (resid0) = 9701.860973
MLMG: Final Iter. 5 resid, resid/bnorm = 0.0003239456123, 3.33900489e-08
MLMG: Timers: Solve = 0.119854461 Iter = 0.114205733 Bottom = 0.000179602
Done calling nodal solver
Call to estdt for level 0 gives dt_lev = 0.1641628699
Call to estdt for level 1 gives dt_lev = 0.1158500463
Minimum estdt over all levels = 0.1158500463
Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1158500463
Multiplying dt by init_shrink; dt = 0.1158500463
Ignoring this new dt since it's larger than the previous dt = 0.0002743178815

Writing plotfile reacting_bubble-2d-amr_pltafter_DivuIter after final DivuIter
inner sponge: r_sp      , r_tp      : 186468750, 224718750
Time to write plotfile: 1.127655074

Doing initial pressure iteration #1

Timestep 0 starts with TIME = 0 DT = 0.0002743178815

Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp      , r_tp      : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs               = 1769558.576
MLMG: Initial residual (resid0) = 1769558.576
MLMG: Final Iter. 7 resid, resid/bnorm = 0.001462788824, 8.266405216e-10
MLMG: Timers: Solve = 0.071499293 Iter = 0.064506489 Bottom = 0.000245644
<<< STEP 4 : advect base >>>
            :  density_advance >>>
            :   tracer_advance >>>
            : enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs               = 1769557.101
MLMG: Initial residual (resid0) = 12562.98069
MLMG: Final Iter. 4 resid, resid/bnorm = 0.0003393793395, 1.9178773e-10
MLMG: Timers: Solve = 0.041650772 Iter = 0.038561087 Bottom = 0.000153476
<<< STEP 8 : advect base >>>
            :  density_advance >>>
            :   tracer_advance >>>
            : enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs               = 1.293088754e+10
MLMG: Initial residual (resid0) = 1.293088754e+10
MLMG: Final Iter. 9 resid, resid/bnorm = 0.0536775589, 4.151111726e-12
MLMG: Timers: Solve = 0.209545865 Iter = 0.205928928 Bottom = 0.00030809
Done calling nodal solver

Timestep 0 ends with TIME = 0.0002743178815 DT = 0.0002743178815
Timing summary:
Advection  :0.397918537 seconds
MAC Proj   :0.126524441 seconds
Nodal Proj :0.263414369 seconds
Reactions  :1.72112297 seconds
Misc       :0.365595304 seconds
Base State :0.001785955 seconds
Time to advance time step: 2.936255576

Writing plotfile 0 after all initialization
inner sponge: r_sp      , r_tp      : 186468750, 224718750
Time to write plotfile: 1.111741838

Writing checkpoint 0 after all initialization
Writing checkpoint reacting_bubble_2d_chk0000000

Beginning main evolution

Timestep 1 starts with TIME = 0 DT = 0.0002743178815

Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp      , r_tp      : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs               = 484084.2371
MLMG: Initial residual (resid0) = 484084.2371
MLMG: Final Iter. 7 resid, resid/bnorm = 3.840929897e-05, 7.934424635e-11
MLMG: Timers: Solve = 0.070841113 Iter = 0.067670446 Bottom = 0.000281453
<<< STEP 4 : advect base >>>
            :  density_advance >>>
            :   tracer_advance >>>
            : enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs               = 484084.2265
MLMG: Initial residual (resid0) = 15.74076829
MLMG: Final Iter. 3 resid, resid/bnorm = 0.0002655449432, 5.485511169e-10
MLMG: Timers: Solve = 0.0333454 Iter = 0.029768805 Bottom = 0.000111833
<<< STEP 8 : advect base >>>
            :  density_advance >>>
            :   tracer_advance >>>
            : enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs               = 3547174.998
MLMG: Initial residual (resid0) = 3547174.998
MLMG: Final Iter. 9 resid, resid/bnorm = 1.467764378e-05, 4.137840334e-12
MLMG: Timers: Solve = 0.210793279 Iter = 0.206829605 Bottom = 0.000333358
Done calling nodal solver

Timestep 1 ends with TIME = 0.0002743178815 DT = 0.0002743178815
Timing summary:
Advection  :0.378541842 seconds
MAC Proj   :0.117010438 seconds
Nodal Proj :0.265992552 seconds
Reactions  :1.665622916 seconds
Misc       :0.280510046 seconds
Base State :0.001572895 seconds
Time to advance time step: 2.733316275
Call to estdt for level 0 gives dt_lev = 0.2285161774
Call to estdt for level 1 gives dt_lev = 0.1613599181
Minimum estdt over all levels = 0.1613599181
Call to estdt at beginning of step 2 gives dt =0.1613599181
dt_growth factor limits the new dt = 0.0003017496696

Timestep 2 starts with TIME = 0.0002743178815 DT = 0.0003017496696

Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp      , r_tp      : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs               = 709087.2083
MLMG: Initial residual (resid0) = 709087.2083
MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005366311702, 7.567914974e-10
MLMG: Timers: Solve = 0.059758648 Iter = 0.056452608 Bottom = 0.000216757
<<< STEP 4 : advect base >>>
            :  density_advance >>>
            :   tracer_advance >>>
            : enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs               = 709086.6226
MLMG: Initial residual (resid0) = 129230.7288
MLMG: Final Iter. 5 resid, resid/bnorm = 9.585541477e-05, 1.351815303e-10
MLMG: Timers: Solve = 0.053036553 Iter = 0.049883925 Bottom = 0.000182184
<<< STEP 8 : advect base >>>
            :  density_advance >>>
            :   tracer_advance >>>
            : enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs               = 3903892.245
MLMG: Initial residual (resid0) = 3903892.245
MLMG: Final Iter. 9 resid, resid/bnorm = 1.619942486e-05, 4.149557377e-12
MLMG: Timers: Solve = 0.218994675 Iter = 0.215055139 Bottom = 0.000345333
Done calling nodal solver

Timestep 2 ends with TIME = 0.0005760675511 DT = 0.0003017496696
Timing summary:
Advection  :0.383729087 seconds
MAC Proj   :0.125298562 seconds
Nodal Proj :0.276062648 seconds
Reactions  :1.772767432 seconds
Misc       :0.296091812 seconds
Base State :0.001704382 seconds
Time to advance time step: 2.854436359
Time to regrid: 0.135010156
Call to estdt for level 0 gives dt_lev = 0.2285277611
Call to estdt for level 1 gives dt_lev = 0.161379943
Minimum estdt over all levels = 0.161379943
Call to estdt at beginning of step 3 gives dt =0.161379943
dt_growth factor limits the new dt = 0.0003319246366

Timestep 3 starts with TIME = 0.0005760675511 DT = 0.0003319246366

Cell Count:
Level 0, 245760 cells
Level 1, 79872 cells
inner sponge: r_sp      , r_tp      : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs               = 1070293.273
MLMG: Initial residual (resid0) = 1070293.273
MLMG: Final Iter. 6 resid, resid/bnorm = 0.0005793995088, 5.413464922e-10
MLMG: Timers: Solve = 0.059307135 Iter = 0.056243969 Bottom = 0.000238576
<<< STEP 4 : advect base >>>
            :  density_advance >>>
            :   tracer_advance >>>
            : enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs               = 1070292.628
MLMG: Initial residual (resid0) = 47909.95947
MLMG: Final Iter. 5 resid, resid/bnorm = 0.0001436926852, 1.342555124e-10
MLMG: Timers: Solve = 0.050929834 Iter = 0.047802259 Bottom = 0.000180305
<<< STEP 8 : advect base >>>
            :  density_advance >>>
            :   tracer_advance >>>
            : enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs               = 4294280.633
MLMG: Initial residual (resid0) = 4294280.633
MLMG: Final Iter. 9 resid, resid/bnorm = 1.781014726e-05, 4.147411121e-12
MLMG: Timers: Solve = 0.209514095 Iter = 0.205672309 Bottom = 0.000333049
Done calling nodal solver

Timestep 3 ends with TIME = 0.0009079921877 DT = 0.0003319246366
Timing summary:
Advection  :0.386470315 seconds
MAC Proj   :0.122862877 seconds
Nodal Proj :0.266008149 seconds
Reactions  :1.664146196 seconds
Misc       :0.289409493 seconds
Base State :0.001621758 seconds
Time to advance time step: 2.729368755

Writing plotfile 3
inner sponge: r_sp      , r_tp      : 186468750, 224718750
Time to write plotfile: 1.103582889

Writing checkpoint 3
Writing checkpoint reacting_bubble_2d_chk0000003

Total Time: 19.36768229
Unused ParmParse Variables:
  [TOP]::amr.check_file(nvals = 1)  :: [reacting_bubble-2d-amr_chk]
  [TOP]::amr.checkpoint_files_output(nvals = 1)  :: [0]

AMReX (25.03-16-g7626a3f0d46d) finalized