Initializing AMReX (25.05-22-gd3798de0bd81)...
MPI initialized with 4 MPI processes
MPI initialized with thread support level 0
OMP initialized with 4 OMP threads
AMReX (25.05-22-gd3798de0bd81) initialized
Calling Setup()
Calling ReadParameters()
reading extern runtime parameters ...
Calling VariableSetup()
Calling BCSetup()
Calling BaseStateGeometry::Init()
Calling Init()
Calling InitData()
initdata model_File = model.hse.cool.coulomb
model file = model.hse.cool.coulomb
reading initial model
640 points found in the initial model
6 variables found in the initial model
model file mapping, level: 0
dr of MAESTRO base state = 562500.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 365
radius at r_cutoff 205593750
Maximum HSE Error = 0.000061
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
Writing plotfile reacting_bubble-2d_pltInitData after InitData
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.314585789
inner sponge: r_sp , r_tp : 186468750, 224718750
[1m[32mDoing initial projection[0m
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.003691069 Iter = 0 Bottom = 0
Done calling nodal solver
Writing plotfile reacting_bubble-2d_pltafter_InitProj after InitProj
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.261783641
Call to firstdt for level 0 gives dt_lev = 0.0004741796958
Multiplying dt_lev by init_shrink; dt_lev = 0.0004741796958
Minimum firstdt over all levels = 0.0004741796958
[1m[32mDoing initial divu iteration #1[0m
Calling nodal solver
MLMG: Initial rhs = 9721.075292
MLMG: Initial residual (resid0) = 9721.075292
MLMG: Final Iter. 5 resid, resid/bnorm = 2.785614879e-05, 2.865541924e-09
MLMG: Timers: Solve = 0.037673265 Iter = 0.034068681 Bottom = 0.001635534
Done calling nodal solver
Call to estdt for level 0 gives dt_lev = 0.1640874127
Minimum estdt over all levels = 0.1640874127
Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1640874127
Multiplying dt by init_shrink; dt = 0.1640874127
Ignoring this new dt since it's larger than the previous dt = 0.0004741796958
Writing plotfile reacting_bubble-2d_pltafter_DivuIter after final DivuIter
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.260144234
[1m[32mDoing initial pressure iteration #1[0m
[1m[32m
Timestep 0 starts with TIME = 0 DT = 0.0004741796958[0m
Cell Count:
Level 0, 245760 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 3039467.923
MLMG: Initial residual (resid0) = 3039467.923
MLMG: Final Iter. 8 resid, resid/bnorm = 0.0002117101103, 6.965367482e-11
MLMG: Timers: Solve = 0.039348726 Iter = 0.035068563 Bottom = 0.004204324
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 3039465.377
MLMG: Initial residual (resid0) = 12702.29496
MLMG: Final Iter. 4 resid, resid/bnorm = 0.0001906890813, 6.273770471e-11
MLMG: Timers: Solve = 0.019352811 Iter = 0.017274145 Bottom = 0.001778122
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 1.286261402e+10
MLMG: Initial residual (resid0) = 1.286261402e+10
MLMG: Final Iter. 8 resid, resid/bnorm = 0.0006446838379, 5.012074814e-14
MLMG: Timers: Solve = 0.059291289 Iter = 0.05724924 Bottom = 0.00289156
Done calling nodal solver
Timestep 0 ends with TIME = 0.0004741796958 DT = 0.0004741796958
Timing summary:
Advection :0.133391122 seconds
MAC Proj :0.066962597 seconds
Nodal Proj :0.072360375 seconds
Reactions :0.376082855 seconds
Misc :0.079496478 seconds
Base State :0.0005439899996 seconds
Time to advance time step: 0.740852725
Writing plotfile 0 after all initialization
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.251305904
[1m[32mBeginning main evolution[0m
[1m[32m
Timestep 1 starts with TIME = 0 DT = 0.0004741796958[0m
Cell Count:
Level 0, 245760 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 833900.7098
MLMG: Initial residual (resid0) = 833900.7098
MLMG: Final Iter. 7 resid, resid/bnorm = 8.080108427e-05, 9.689532977e-11
MLMG: Timers: Solve = 0.031950079 Iter = 0.029853001 Bottom = 0.003548035
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 833900.67
MLMG: Initial residual (resid0) = 1.478931552
MLMG: Final Iter. 4 resid, resid/bnorm = 4.254049357e-05, 5.101386184e-11
MLMG: Timers: Solve = 0.021827783 Iter = 0.019442541 Bottom = 0.001487833
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 6099195.993
MLMG: Initial residual (resid0) = 6099195.993
MLMG: Final Iter. 8 resid, resid/bnorm = 2.849847078e-07, 4.672496312e-14
MLMG: Timers: Solve = 0.056155203 Iter = 0.054265107 Bottom = 0.002901346
Done calling nodal solver
Timestep 1 ends with TIME = 0.0004741796958 DT = 0.0004741796958
Timing summary:
Advection :0.110834811 seconds
MAC Proj :0.061481328 seconds
Nodal Proj :0.068082139 seconds
Reactions :0.352307953 seconds
Misc :0.066590987 seconds
Base State :0.0005213639988 seconds
Time to advance time step: 0.672363788
Call to estdt for level 0 gives dt_lev = 0.2283219495
Minimum estdt over all levels = 0.2283219495
Call to estdt at beginning of step 2 gives dt =0.2283219495
dt_growth factor limits the new dt = 0.0005215976653
[1m[32m
Timestep 2 starts with TIME = 0.0004741796958 DT = 0.0005215976653[0m
Cell Count:
Level 0, 245760 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 910937.2256
MLMG: Initial residual (resid0) = 910937.2256
MLMG: Final Iter. 7 resid, resid/bnorm = 8.911194368e-05, 9.782446164e-11
MLMG: Timers: Solve = 0.031979696 Iter = 0.029692098 Bottom = 0.003615541
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 910943.1296
MLMG: Initial residual (resid0) = 4850.38368
MLMG: Final Iter. 6 resid, resid/bnorm = 2.823439037e-05, 3.099467953e-11
MLMG: Timers: Solve = 0.023535423 Iter = 0.021866224 Bottom = 0.001558433
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 6722905.404
MLMG: Initial residual (resid0) = 6722905.404
MLMG: Final Iter. 8 resid, resid/bnorm = 2.947635949e-07, 4.384467386e-14
MLMG: Timers: Solve = 0.049698957 Iter = 0.048171439 Bottom = 0.001716187
Done calling nodal solver
Timestep 2 ends with TIME = 0.0009957773611 DT = 0.0005215976653
Timing summary:
Advection :0.107255592 seconds
MAC Proj :0.061938169 seconds
Nodal Proj :0.060704902 seconds
Reactions :0.335922684 seconds
Misc :0.064887379 seconds
Base State :0.000509896 seconds
Time to advance time step: 0.631088789
Call to estdt for level 0 gives dt_lev = 0.2283888372
Minimum estdt over all levels = 0.2283888372
Call to estdt at beginning of step 3 gives dt =0.2283888372
dt_growth factor limits the new dt = 0.0005737574319
[1m[32m
Timestep 3 starts with TIME = 0.0009957773611 DT = 0.0005737574319[0m
Cell Count:
Level 0, 245760 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1016966.589
MLMG: Initial residual (resid0) = 1016966.589
MLMG: Final Iter. 7 resid, resid/bnorm = 9.762158987e-05, 9.599291747e-11
MLMG: Timers: Solve = 0.027247732 Iter = 0.025506928 Bottom = 0.002161872
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1016973.082
MLMG: Initial residual (resid0) = 4440.004913
MLMG: Final Iter. 6 resid, resid/bnorm = 2.491620359e-05, 2.450035702e-11
MLMG: Timers: Solve = 0.02340656 Iter = 0.021702361 Bottom = 0.001614314
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 7395260.911
MLMG: Initial residual (resid0) = 7395260.911
MLMG: Final Iter. 8 resid, resid/bnorm = 3.967434168e-07, 5.364833257e-14
MLMG: Timers: Solve = 0.049846252 Iter = 0.048320802 Bottom = 0.00178313
Done calling nodal solver
Timestep 3 ends with TIME = 0.001569534793 DT = 0.0005737574319
Timing summary:
Advection :0.104131158 seconds
MAC Proj :0.056038863 seconds
Nodal Proj :0.060795051 seconds
Reactions :0.330468228 seconds
Misc :0.064881789 seconds
Base State :0.000477699999 seconds
Time to advance time step: 0.616661668
Writing plotfile 3
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 0.248623033
Total Time: 5.541269324
Unused ParmParse Variables:
[TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d_chk]
[TOP]::amr.checkpoint_files_output(nvals = 1) :: [0]
[TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2]
AMReX (25.05-22-gd3798de0bd81) finalized