Initializing AMReX (25.05-26-gfc469a32d34d)...
MPI initialized with 4 MPI processes
MPI initialized with thread support level 0
OMP initialized with 4 OMP threads
AMReX (25.05-26-gfc469a32d34d) initialized
Calling Setup()
Calling ReadParameters()
reading extern runtime parameters ...
Calling VariableSetup()
Calling BCSetup()
Calling BaseStateGeometry::Init()
Calling Init()
Calling InitData()
initdata model_File = model.hse.cool.coulomb
model file = model.hse.cool.coulomb
reading initial model
640 points found in the initial model
6 variables found in the initial model
model file mapping, level: 0
dr of MAESTRO base state = 562500.000000
dr of input file data = 562500.000000
maximum radius (cell-centered) of input model = 359718750.000000
setting r_cutoff to 365
radius at r_cutoff 205593750
Maximum HSE Error = 0.000061
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
Writing plotfile reacting_bubble-3d_pltInitData after InitData
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.516660879
inner sponge: r_sp , r_tp : 186468750, 224718750
[1m[32mDoing initial projection[0m
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.01964695 Iter = 0 Bottom = 0
Done calling nodal solver
Writing plotfile reacting_bubble-3d_pltafter_InitProj after InitProj
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.372066949
Call to firstdt for level 0 gives dt_lev = 0.0004741795139
Multiplying dt_lev by init_shrink; dt_lev = 0.0004741795139
Minimum firstdt over all levels = 0.0004741795139
[1m[32mDoing initial divu iteration #1[0m
Calling nodal solver
MLMG: Initial rhs = 2054.815795
MLMG: Initial residual (resid0) = 2054.815795
MLMG: Final Iter. 7 resid, resid/bnorm = 5.583462581e-10, 2.717256989e-13
MLMG: Timers: Solve = 0.734055014 Iter = 0.714889786 Bottom = 0.02256103
Done calling nodal solver
Call to estdt for level 0 gives dt_lev = 0.1719927642
Minimum estdt over all levels = 0.1719927642
Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1719927642
Multiplying dt by init_shrink; dt = 0.1719927642
Ignoring this new dt since it's larger than the previous dt = 0.0004741795139
Writing plotfile reacting_bubble-3d_pltafter_DivuIter after final DivuIter
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.400311697
[1m[32mDoing initial pressure iteration #1[0m
[1m[32m
Timestep 0 starts with TIME = 0 DT = 0.0004741795139[0m
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 2728631.973
MLMG: Initial residual (resid0) = 2728631.973
MLMG: Final Iter. 9 resid, resid/bnorm = 1.565250568e-05, 5.736393121e-12
MLMG: Timers: Solve = 0.302623552 Iter = 0.283604831 Bottom = 0.046225828
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 2728627.792
MLMG: Initial residual (resid0) = 8729.745164
MLMG: Final Iter. 5 resid, resid/bnorm = 0.0002251335536, 8.2507975e-11
MLMG: Timers: Solve = 0.174278192 Iter = 0.156352883 Bottom = 0.02572939
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 1.157552615e+10
MLMG: Initial residual (resid0) = 1.157552615e+10
MLMG: Final Iter. 7 resid, resid/bnorm = 0.002669021285, 2.305745112e-13
MLMG: Timers: Solve = 0.83223869 Iter = 0.812742034 Bottom = 0.024508734
Done calling nodal solver
Timestep 0 ends with TIME = 0.0004741795139 DT = 0.0004741795139
Timing summary:
Advection :1.866339338 seconds
MAC Proj :0.549715177 seconds
Nodal Proj :0.949313499 seconds
Reactions :2.001078667 seconds
Misc :0.454022634 seconds
Base State :0.009214538 seconds
Time to advance time step: 5.850344919
Writing plotfile 0 after all initialization
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.359167486
[1m[32mBeginning main evolution[0m
[1m[32m
Timestep 1 starts with TIME = 0 DT = 0.0004741795139[0m
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1308380.202
MLMG: Initial residual (resid0) = 1308380.202
MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001226427703, 9.37363391e-11
MLMG: Timers: Solve = 0.270004047 Iter = 0.251913564 Bottom = 0.042370028
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1308380.236
MLMG: Initial residual (resid0) = 0.982250484
MLMG: Final Iter. 4 resid, resid/bnorm = 3.543014827e-05, 2.707939733e-11
MLMG: Timers: Solve = 0.144382997 Iter = 0.126278791 Bottom = 0.020983555
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 5488883.985
MLMG: Initial residual (resid0) = 5488883.985
MLMG: Final Iter. 7 resid, resid/bnorm = 1.276901457e-06, 2.326340766e-13
MLMG: Timers: Solve = 0.790813849 Iter = 0.770499601 Bottom = 0.027273291
Done calling nodal solver
Timestep 1 ends with TIME = 0.0004741795139 DT = 0.0004741795139
Timing summary:
Advection :1.702829052 seconds
MAC Proj :0.481108817 seconds
Nodal Proj :0.896688819 seconds
Reactions :1.944419331 seconds
Misc :0.459078273 seconds
Base State :0.003095584 seconds
Time to advance time step: 5.510267946
Call to estdt for level 0 gives dt_lev = 0.2012294718
Minimum estdt over all levels = 0.2012294718
Call to estdt at beginning of step 2 gives dt =0.2012294718
dt_growth factor limits the new dt = 0.0005215974653
[1m[32m
Timestep 2 starts with TIME = 0.0004741795139 DT = 0.0005215974653[0m
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1426181.405
MLMG: Initial residual (resid0) = 1426181.405
MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001355668355, 9.505581478e-11
MLMG: Timers: Solve = 0.267682323 Iter = 0.249664728 Bottom = 0.041498236
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1426184.06
MLMG: Initial residual (resid0) = 5132.459653
MLMG: Final Iter. 6 resid, resid/bnorm = 3.069994636e-05, 2.152593569e-11
MLMG: Timers: Solve = 0.208397618 Iter = 0.19020094 Bottom = 0.032872903
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 6063789.798
MLMG: Initial residual (resid0) = 6063789.798
MLMG: Final Iter. 7 resid, resid/bnorm = 1.456762325e-06, 2.402395817e-13
MLMG: Timers: Solve = 0.804086893 Iter = 0.783822047 Bottom = 0.022403198
Done calling nodal solver
Timestep 2 ends with TIME = 0.0009957769792 DT = 0.0005215974653
Timing summary:
Advection :1.715033355 seconds
MAC Proj :0.542399666 seconds
Nodal Proj :0.911544337 seconds
Reactions :1.919394487 seconds
Misc :0.458098804 seconds
Base State :0.002708624 seconds
Time to advance time step: 5.56732018
Call to estdt for level 0 gives dt_lev = 0.20128497
Minimum estdt over all levels = 0.20128497
Call to estdt at beginning of step 3 gives dt =0.20128497
dt_growth factor limits the new dt = 0.0005737572118
[1m[32m
Timestep 3 starts with TIME = 0.0009957769792 DT = 0.0005737572118[0m
Cell Count:
Level 0, 1327104 cells
inner sponge: r_sp , r_tp : 186468750, 224718750
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 1597942.993
MLMG: Initial residual (resid0) = 1597942.993
MLMG: Final Iter. 8 resid, resid/bnorm = 0.0001512539166, 9.465538957e-11
MLMG: Timers: Solve = 0.268355664 Iter = 0.250396215 Bottom = 0.041298032
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 1597945.914
MLMG: Initial residual (resid0) = 5863.170847
MLMG: Final Iter. 6 resid, resid/bnorm = 3.355396075e-05, 2.099818302e-11
MLMG: Timers: Solve = 0.208260912 Iter = 0.190231587 Bottom = 0.032298729
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 6670310.291
MLMG: Initial residual (resid0) = 6670310.291
MLMG: Final Iter. 7 resid, resid/bnorm = 4.166027845e-06, 6.245628259e-13
MLMG: Timers: Solve = 0.806641735 Iter = 0.786478928 Bottom = 0.024805403
Done calling nodal solver
Timestep 3 ends with TIME = 0.001569534191 DT = 0.0005737572118
Timing summary:
Advection :1.717764779 seconds
MAC Proj :0.543225486 seconds
Nodal Proj :0.913098214 seconds
Reactions :1.952350978 seconds
Misc :0.469727943 seconds
Base State :0.002720162 seconds
Time to advance time step: 5.61604497
Writing plotfile 3
inner sponge: r_sp , r_tp : 186468750, 224718750
Time to write plotfile: 1.472963959
Total Time: 33.15752054
Unused ParmParse Variables:
[TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-3d_chk]
[TOP]::amr.checkpoint_files_output(nvals = 1) :: [0]
[TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2]
AMReX (25.05-26-gfc469a32d34d) finalized