Initializing AMReX (25.05-27-g78268f16d626)...
MPI initialized with 2 MPI processes
MPI initialized with thread support level 0
OMP initialized with 4 OMP threads
AMReX (25.05-27-g78268f16d626) initialized
Calling Setup()
Calling ReadParameters()
reading extern runtime parameters ...
Calling VariableSetup()
Calling BCSetup()
Calling BaseStateGeometry::Init()
Calling Init()
Calling InitData()
initdata model_File =
cutoff densities:
low density cutoff (for mapping the model) = 1e-10
buoyancy cutoff density
(for zeroing rho - rho_0, centrifugal term) = 5e-10
anelastic cutoff = 1e-10
Maximum HSE Error = 2.273736754e-13
(after putting initial model into base state arrays, and
for density < base_cutoff_density)
Writing plotfile RT_pltInitData after InitData
Time to write plotfile: 0.061210961
[1m[32mDoing initial projection[0m
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.003082087 Iter = 0 Bottom = 0
Done calling nodal solver
Writing plotfile RT_pltafter_InitProj after InitProj
Time to write plotfile: 0.048104343
Call to firstdt for level 0 gives dt_lev = 0.0006089835859
Multiplying dt_lev by init_shrink; dt_lev = 6.089835859e-05
Minimum firstdt over all levels = 6.089835859e-05
[1m[32mDoing initial divu iteration #1[0m
Calling nodal solver
MLMG: Initial rhs = 0
MLMG: Initial residual (resid0) = 0
MLMG: No iterations needed
MLMG: Timers: Solve = 0.002946785 Iter = 0 Bottom = 0
Done calling nodal solver
Call to estdt for level 0 gives dt_lev = 0.08660444773
Minimum estdt over all levels = 0.08660444773
Call to estdt at end of istep_divu_iter = 1 gives dt = 0.08660444773
Multiplying dt by init_shrink; dt = 0.008660444773
Ignoring this new dt since it's larger than the previous dt = 6.089835859e-05
Writing plotfile RT_pltafter_DivuIter after final DivuIter
Time to write plotfile: 0.046549962
[1m[32mDoing initial pressure iteration #1[0m
[1m[32m
Timestep 0 starts with TIME = 0 DT = 6.089835859e-05[0m
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 0.002421164472
MLMG: Initial residual (resid0) = 0.002421164472
MLMG: Final Iter. 9 resid, resid/bnorm = 1.751907767e-13, 7.235806522e-11
MLMG: Timers: Solve = 0.035742236 Iter = 0.034102711 Bottom = 0.003411372
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 0.002421205691
MLMG: Initial residual (resid0) = 2.151449931e-06
MLMG: Final Iter. 7 resid, resid/bnorm = 9.927909435e-14, 4.100399017e-11
MLMG: Timers: Solve = 0.029386697 Iter = 0.027792418 Bottom = 0.002482038
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 58.12657035
MLMG: Initial residual (resid0) = 58.12657035
MLMG: Final Iter. 8 resid, resid/bnorm = 2.15578666e-11, 3.708780077e-13
MLMG: Timers: Solve = 0.055350045 Iter = 0.053663852 Bottom = 0.002249206
Done calling nodal solver
Timestep 0 ends with TIME = 6.089835859e-05 DT = 6.089835859e-05
Timing summary:
Advection :0.088243493 seconds
MAC Proj :0.072405834 seconds
Nodal Proj :0.061730475 seconds
Reactions :0.004063964 seconds
Misc :0.024614975 seconds
Base State :0.0004362580001 seconds
Time to advance time step: 0.254188911
Writing plotfile 0 after all initialization
Time to write plotfile: 0.042958377
[1m[32mBeginning main evolution[0m
[1m[32m
Timestep 1 starts with TIME = 0 DT = 6.089835859e-05[0m
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 2.394238647e-05
MLMG: Initial residual (resid0) = 2.394238647e-05
MLMG: Final Iter. 9 resid, resid/bnorm = 3.181792236e-16, 1.328936963e-11
MLMG: Timers: Solve = 0.035503865 Iter = 0.033954978 Bottom = 0.003530234
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 2.394218844e-05
MLMG: Initial residual (resid0) = 1.928423574e-06
MLMG: Final Iter. 9 resid, resid/bnorm = 6.036511589e-16, 2.521286475e-11
MLMG: Timers: Solve = 0.034728519 Iter = 0.033200916 Bottom = 0.003049901
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 0.003539812449
MLMG: Initial residual (resid0) = 0.003539812449
MLMG: Final Iter. 8 resid, resid/bnorm = 1.329231863e-15, 3.755091216e-13
MLMG: Timers: Solve = 0.049797383 Iter = 0.048223057 Bottom = 0.002274717
Done calling nodal solver
Timestep 1 ends with TIME = 6.089835859e-05 DT = 6.089835859e-05
Timing summary:
Advection :0.074964914 seconds
MAC Proj :0.076558986 seconds
Nodal Proj :0.055670735 seconds
Reactions :0.003877429 seconds
Misc :0.012388271 seconds
Base State :0.000384642 seconds
Time to advance time step: 0.227995635
Call to estdt for level 0 gives dt_lev = 0.3128878797
Minimum estdt over all levels = 0.3128878797
Call to estdt at beginning of step 2 gives dt =0.3128878797
dt_growth factor limits the new dt = 6.698819445e-05
[1m[32m
Timestep 2 starts with TIME = 6.089835859e-05 DT = 6.698819445e-05[0m
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 3.050043585e-05
MLMG: Initial residual (resid0) = 3.050043585e-05
MLMG: Final Iter. 9 resid, resid/bnorm = 2.284814624e-15, 7.491088439e-11
MLMG: Timers: Solve = 0.034695274 Iter = 0.033189359 Bottom = 0.003370854
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 3.059063412e-05
MLMG: Initial residual (resid0) = 5.66083759e-06
MLMG: Final Iter. 10 resid, resid/bnorm = 4.892627475e-16, 1.599387399e-11
MLMG: Timers: Solve = 0.038509114 Iter = 0.036935468 Bottom = 0.003385694
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 0.003894013591
MLMG: Initial residual (resid0) = 0.003894013591
MLMG: Final Iter. 8 resid, resid/bnorm = 1.490994828e-15, 3.828940996e-13
MLMG: Timers: Solve = 0.050130586 Iter = 0.048476019 Bottom = 0.002234462
Done calling nodal solver
Timestep 2 ends with TIME = 0.000127886553 DT = 6.698819445e-05
Timing summary:
Advection :0.074233386 seconds
MAC Proj :0.07934225 seconds
Nodal Proj :0.05602215 seconds
Reactions :0.003860013 seconds
Misc :0.013011869 seconds
Base State :0.000390287 seconds
Time to advance time step: 0.226778266
Call to estdt for level 0 gives dt_lev = 0.3130286362
Minimum estdt over all levels = 0.3130286362
Call to estdt at beginning of step 3 gives dt =0.3130286362
dt_growth factor limits the new dt = 7.36870139e-05
[1m[32m
Timestep 3 starts with TIME = 0.000127886553 DT = 7.36870139e-05[0m
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 3.168800511e-05
MLMG: Initial residual (resid0) = 3.168800511e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 5.650700787e-16, 1.783230205e-11
MLMG: Timers: Solve = 0.038444378 Iter = 0.036911238 Bottom = 0.003633434
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 3.178722337e-05
MLMG: Initial residual (resid0) = 1.012935749e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 6.833616179e-16, 2.149799653e-11
MLMG: Timers: Solve = 0.04125098 Iter = 0.039026002 Bottom = 0.003890304
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 0.004283414244
MLMG: Initial residual (resid0) = 0.004283414244
MLMG: Final Iter. 8 resid, resid/bnorm = 1.614810716e-15, 3.769914894e-13
MLMG: Timers: Solve = 0.050070509 Iter = 0.048553872 Bottom = 0.002513865
Done calling nodal solver
Timestep 3 ends with TIME = 0.0002015735669 DT = 7.36870139e-05
Timing summary:
Advection :0.103795204 seconds
MAC Proj :0.086290362 seconds
Nodal Proj :0.056573391 seconds
Reactions :0.005265673 seconds
Misc :0.013752099 seconds
Base State :0.0008069949999 seconds
Time to advance time step: 0.266252724
Call to estdt for level 0 gives dt_lev = 0.3130285358
Minimum estdt over all levels = 0.3130285358
Call to estdt at beginning of step 4 gives dt =0.3130285358
dt_growth factor limits the new dt = 8.105571529e-05
[1m[32m
Timestep 4 starts with TIME = 0.0002015735669 DT = 8.105571529e-05[0m
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 3.570538736e-05
MLMG: Initial residual (resid0) = 3.570538736e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 7.571110825e-16, 2.120439347e-11
MLMG: Timers: Solve = 0.040027912 Iter = 0.038729016 Bottom = 0.003998109
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 3.581452755e-05
MLMG: Initial residual (resid0) = 1.504387741e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 8.870129024e-16, 2.476684639e-11
MLMG: Timers: Solve = 0.039823441 Iter = 0.038541669 Bottom = 0.003864148
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 0.004711755906
MLMG: Initial residual (resid0) = 0.004711755906
MLMG: Final Iter. 8 resid, resid/bnorm = 1.768550584e-15, 3.753485153e-13
MLMG: Timers: Solve = 0.049814599 Iter = 0.048302197 Bottom = 0.002530328
Done calling nodal solver
Timestep 4 ends with TIME = 0.0002826292822 DT = 8.105571529e-05
Timing summary:
Advection :0.067832978 seconds
MAC Proj :0.085903796 seconds
Nodal Proj :0.055341111 seconds
Reactions :0.003801399 seconds
Misc :0.029352907 seconds
Base State :0.0003362370001 seconds
Time to advance time step: 0.242542276
Call to estdt for level 0 gives dt_lev = 0.313028505
Minimum estdt over all levels = 0.313028505
Call to estdt at beginning of step 5 gives dt =0.313028505
dt_growth factor limits the new dt = 8.916128682e-05
[1m[32m
Timestep 5 starts with TIME = 0.0002826292822 DT = 8.916128682e-05[0m
Cell Count:
Level 0, 131072 cells
<<< STEP 1 : react state >>>
<<< STEP 2 : make w0 >>>
<<< STEP 3 : create MAC velocities >>>
MLMG: Initial rhs = 4.013180326e-05
MLMG: Initial residual (resid0) = 4.013180326e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 9.681425651e-16, 2.412407334e-11
MLMG: Timers: Solve = 0.039833556 Iter = 0.038533384 Bottom = 0.003958621
<<< STEP 4 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 4a: thermal conduct >>>
<<< STEP 5 : react state >>>
<<< STEP 6 : make new S and new w0 >>>
<<< STEP 7 : create MAC velocities >>>
MLMG: Initial rhs = 4.025185748e-05
MLMG: Initial residual (resid0) = 2.044985444e-05
MLMG: Final Iter. 10 resid, resid/bnorm = 1.111036176e-15, 2.760210946e-11
MLMG: Timers: Solve = 0.039857961 Iter = 0.038544662 Bottom = 0.0038254
<<< STEP 8 : advect base >>>
: density_advance >>>
: tracer_advance >>>
: enthalpy_advance >>>
<<< STEP 8a: thermal conduct >>>
<<< STEP 9 : react state >>>
<<< STEP 10: make new S >>>
<<< STEP 11: update and project new velocity >>>
Calling nodal solver
MLMG: Initial rhs = 0.005182931901
MLMG: Initial residual (resid0) = 0.005182931901
MLMG: Final Iter. 8 resid, resid/bnorm = 1.942022931e-15, 3.746958224e-13
MLMG: Timers: Solve = 0.04994486 Iter = 0.048441756 Bottom = 0.002489315
Done calling nodal solver
Timestep 5 ends with TIME = 0.000371790569 DT = 8.916128682e-05
Timing summary:
Advection :0.068347565 seconds
MAC Proj :0.085725669 seconds
Nodal Proj :0.055475761 seconds
Reactions :0.002635103 seconds
Misc :0.010545953 seconds
Base State :0.0003394660002 seconds
Time to advance time step: 0.223030722
Writing plotfile 5
Time to write plotfile: 0.036345187
Total Time: 1.735227203
Unused ParmParse Variables:
[TOP]::amr.check_file(nvals = 1) :: [RT_chk]
[TOP]::amr.checkpoint_files_output(nvals = 1) :: [0]
[TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2]
AMReX (25.05-27-g78268f16d626) finalized