Initializing AMReX (25.06-7-g6ab61fb6d8a7)... MPI initialized with 4 MPI processes MPI initialized with thread support level 0 OMP initialized with 4 OMP threads AMReX (25.06-7-g6ab61fb6d8a7) initialized Calling Setup() Calling ReadParameters() reading extern runtime parameters ... Calling VariableSetup() Calling BCSetup() Calling BaseStateGeometry::Init() Calling Init() Calling InitData() initdata model_File = model.hse.cool.coulomb model file = model.hse.cool.coulomb reading initial model 640 points found in the initial model 6 variables found in the initial model model file mapping, level: 0 dr of MAESTRO base state = 562500.000000 dr of input file data = 562500.000000 maximum radius (cell-centered) of input model = 359718750.000000 setting r_cutoff to 365 radius at r_cutoff 205593750 Maximum HSE Error = 0.000061 (after putting initial model into base state arrays, and for density < base_cutoff_density) Writing plotfile reacting_bubble-2d_pltInitData after InitData inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.32656235 inner sponge: r_sp , r_tp : 186468750, 224718750 Doing initial projection Calling nodal solver MLMG: Initial rhs = 0 MLMG: Initial residual (resid0) = 0 MLMG: No iterations needed MLMG: Timers: Solve = 0.003595098 Iter = 0 Bottom = 0 Done calling nodal solver Writing plotfile reacting_bubble-2d_pltafter_InitProj after InitProj inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.254785004 Call to firstdt for level 0 gives dt_lev = 0.0004741796958 Multiplying dt_lev by init_shrink; dt_lev = 0.0004741796958 Minimum firstdt over all levels = 0.0004741796958 Doing initial divu iteration #1 Calling nodal solver MLMG: Initial rhs = 9721.075292 MLMG: Initial residual (resid0) = 9721.075292 MLMG: Final Iter. 5 resid, resid/bnorm = 2.785614879e-05, 2.865541924e-09 MLMG: Timers: Solve = 0.038218744 Iter = 0.034678918 Bottom = 0.001607623 Done calling nodal solver Call to estdt for level 0 gives dt_lev = 0.1640874127 Minimum estdt over all levels = 0.1640874127 Call to estdt at end of istep_divu_iter = 1 gives dt = 0.1640874127 Multiplying dt by init_shrink; dt = 0.1640874127 Ignoring this new dt since it's larger than the previous dt = 0.0004741796958 Writing plotfile reacting_bubble-2d_pltafter_DivuIter after final DivuIter inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.249198618 Doing initial pressure iteration #1  Timestep 0 starts with TIME = 0 DT = 0.0004741796958 Cell Count: Level 0, 245760 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 3039467.923 MLMG: Initial residual (resid0) = 3039467.923 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0002117101103, 6.965367482e-11 MLMG: Timers: Solve = 0.038370944 Iter = 0.034712429 Bottom = 0.003913348 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 3039465.377 MLMG: Initial residual (resid0) = 12702.29496 MLMG: Final Iter. 4 resid, resid/bnorm = 0.0001906890813, 6.273770471e-11 MLMG: Timers: Solve = 0.019084256 Iter = 0.017063589 Bottom = 0.001651548 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 1.286261402e+10 MLMG: Initial residual (resid0) = 1.286261402e+10 MLMG: Final Iter. 8 resid, resid/bnorm = 0.0006446838379, 5.012074814e-14 MLMG: Timers: Solve = 0.056394146 Iter = 0.054616635 Bottom = 0.002693363 Done calling nodal solver Timestep 0 ends with TIME = 0.0004741796958 DT = 0.0004741796958 Timing summary: Advection :0.127678638 seconds MAC Proj :0.065915245 seconds Nodal Proj :0.068461842 seconds Reactions :0.334897897 seconds Misc :0.075466358 seconds Base State :0.0005208890003 seconds Time to advance time step: 0.684084417 Writing plotfile 0 after all initialization inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.241361461 Beginning main evolution  Timestep 1 starts with TIME = 0 DT = 0.0004741796958 Cell Count: Level 0, 245760 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 833900.7098 MLMG: Initial residual (resid0) = 833900.7098 MLMG: Final Iter. 7 resid, resid/bnorm = 8.080108427e-05, 9.689532977e-11 MLMG: Timers: Solve = 0.032010244 Iter = 0.029971461 Bottom = 0.00343066 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 833900.67 MLMG: Initial residual (resid0) = 1.478931552 MLMG: Final Iter. 4 resid, resid/bnorm = 4.254049357e-05, 5.101386184e-11 MLMG: Timers: Solve = 0.01871486 Iter = 0.016710475 Bottom = 0.001373887 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6099195.993 MLMG: Initial residual (resid0) = 6099195.993 MLMG: Final Iter. 8 resid, resid/bnorm = 2.849847078e-07, 4.672496312e-14 MLMG: Timers: Solve = 0.056325976 Iter = 0.054536104 Bottom = 0.002716814 Done calling nodal solver Timestep 1 ends with TIME = 0.0004741796958 DT = 0.0004741796958 Timing summary: Advection :0.108972006 seconds MAC Proj :0.057295238 seconds Nodal Proj :0.068222399 seconds Reactions :0.335509078 seconds Misc :0.063068688 seconds Base State :0.0005012360002 seconds Time to advance time step: 0.644694671 Call to estdt for level 0 gives dt_lev = 0.2283219495 Minimum estdt over all levels = 0.2283219495 Call to estdt at beginning of step 2 gives dt =0.2283219495 dt_growth factor limits the new dt = 0.0005215976653  Timestep 2 starts with TIME = 0.0004741796958 DT = 0.0005215976653 Cell Count: Level 0, 245760 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 910937.2256 MLMG: Initial residual (resid0) = 910937.2256 MLMG: Final Iter. 7 resid, resid/bnorm = 8.911194368e-05, 9.782446164e-11 MLMG: Timers: Solve = 0.031975075 Iter = 0.029949492 Bottom = 0.003400986 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 910943.1296 MLMG: Initial residual (resid0) = 4850.38368 MLMG: Final Iter. 6 resid, resid/bnorm = 2.823439037e-05, 3.099467953e-11 MLMG: Timers: Solve = 0.026799083 Iter = 0.024904239 Bottom = 0.002516937 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 6722905.404 MLMG: Initial residual (resid0) = 6722905.404 MLMG: Final Iter. 8 resid, resid/bnorm = 2.947635949e-07, 4.384467386e-14 MLMG: Timers: Solve = 0.055693584 Iter = 0.053967051 Bottom = 0.002739561 Done calling nodal solver Timestep 2 ends with TIME = 0.0009957773611 DT = 0.0005215976653 Timing summary: Advection :0.106091128 seconds MAC Proj :0.065620162 seconds Nodal Proj :0.067349429 seconds Reactions :0.336557477 seconds Misc :0.064758188 seconds Base State :0.0005085879998 seconds Time to advance time step: 0.640737947 Call to estdt for level 0 gives dt_lev = 0.2283888372 Minimum estdt over all levels = 0.2283888372 Call to estdt at beginning of step 3 gives dt =0.2283888372 dt_growth factor limits the new dt = 0.0005737574319  Timestep 3 starts with TIME = 0.0009957773611 DT = 0.0005737574319 Cell Count: Level 0, 245760 cells inner sponge: r_sp , r_tp : 186468750, 224718750 <<< STEP 1 : react state >>> <<< STEP 2 : make w0 >>> <<< STEP 3 : create MAC velocities >>> MLMG: Initial rhs = 1016966.589 MLMG: Initial residual (resid0) = 1016966.589 MLMG: Final Iter. 7 resid, resid/bnorm = 9.762158987e-05, 9.599291747e-11 MLMG: Timers: Solve = 0.031328446 Iter = 0.029476329 Bottom = 0.00345293 <<< STEP 4 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 4a: thermal conduct >>> <<< STEP 5 : react state >>> <<< STEP 6 : make new S and new w0 >>> <<< STEP 7 : create MAC velocities >>> MLMG: Initial rhs = 1016973.082 MLMG: Initial residual (resid0) = 4440.004913 MLMG: Final Iter. 6 resid, resid/bnorm = 2.491620359e-05, 2.450035702e-11 MLMG: Timers: Solve = 0.026658723 Iter = 0.024804074 Bottom = 0.002577326 <<< STEP 8 : advect base >>> : density_advance >>> : tracer_advance >>> : enthalpy_advance >>> <<< STEP 8a: thermal conduct >>> <<< STEP 9 : react state >>> <<< STEP 10: make new S >>> <<< STEP 11: update and project new velocity >>> Calling nodal solver MLMG: Initial rhs = 7395260.911 MLMG: Initial residual (resid0) = 7395260.911 MLMG: Final Iter. 8 resid, resid/bnorm = 3.967434168e-07, 5.364833257e-14 MLMG: Timers: Solve = 0.055762185 Iter = 0.054020674 Bottom = 0.002844159 Done calling nodal solver Timestep 3 ends with TIME = 0.001569534793 DT = 0.0005737574319 Timing summary: Advection :0.105321461 seconds MAC Proj :0.064338902 seconds Nodal Proj :0.067491133 seconds Reactions :0.334939106 seconds Misc :0.064903032 seconds Base State :0.0004864160003 seconds Time to advance time step: 0.637297709 Writing plotfile 3 inner sponge: r_sp , r_tp : 186468750, 224718750 Time to write plotfile: 0.248094354 Total Time: 5.433788993 Unused ParmParse Variables: [TOP]::amr.check_file(nvals = 1) :: [reacting_bubble-2d_chk] [TOP]::amr.checkpoint_files_output(nvals = 1) :: [0] [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] AMReX (25.06-7-g6ab61fb6d8a7) finalized